RNA–Protein interactions for RNA: ENST00000436395.1

LINC02558-202, Transcript of long intergenic non-protein coding RNA 2558, humanhuman

TSL 5 BASIC

Gene LINC02558, Length 298 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02558-202ENST00000436395 IGF1RP08069 1367 aa28.8■■■□□ 2.2
LINC02558-202ENST00000436395 CUL7Q14999 1698 aa28.73■■■□□ 2.19
LINC02558-202ENST00000436395 KIAA0586Q9BVV6 1533 aa28.67■■■□□ 2.18
LINC02558-202ENST00000436395 CARMIL1Q5VZK9 1371 aa28.6■■■□□ 2.17
LINC02558-202ENST00000436395 KIF13AQ9H1H9 1805 aa28.55■■■□□ 2.16
LINC02558-202ENST00000436395 ADCY10Q96PN6 1610 aa28.52■■■□□ 2.16
LINC02558-202ENST00000436395 NPM1P06748 294 aaKnown RBP eCLIP28.46■■■□□ 2.15
LINC02558-202ENST00000436395 MAPKBP1O60336 1514 aa28.45■■■□□ 2.15
LINC02558-202ENST00000436395 ABCC10Q5T3U5 1492 aa28.42■■■□□ 2.14
LINC02558-202ENST00000436395 IQGAP2Q13576 1575 aa28.41■■■□□ 2.14
LINC02558-202ENST00000436395 PTPRGP23470 1445 aa28.39■■■□□ 2.14
LINC02558-202ENST00000436395 FAM69CQ0P6D2 419 aa28.39■■■□□ 2.14
LINC02558-202ENST00000436395 DIP2BQ9P265 1576 aa28.37■■■□□ 2.13
LINC02558-202ENST00000436395 CARMIL2Q6F5E8 1435 aa28.36■■■□□ 2.13
LINC02558-202ENST00000436395 TNIKQ9UKE5 1360 aa28.35■■■□□ 2.13
LINC02558-202ENST00000436395 RAPGEF2Q9Y4G8 1499 aa28.34■■■□□ 2.13
LINC02558-202ENST00000436395 TTBK1Q5TCY1 1321 aaPredicted RBP28.34■■■□□ 2.13
LINC02558-202ENST00000436395 DISP1Q96F81 1524 aa28.29■■■□□ 2.12
LINC02558-202ENST00000436395 ABCC2Q92887 1545 aa28.24■■■□□ 2.11
LINC02558-202ENST00000436395 UGGT2Q9NYU1 1516 aa28.24■■■□□ 2.11
LINC02558-202ENST00000436395 AEBP2Q6ZN18 517 aaPredicted RBP28.24■■■□□ 2.11
LINC02558-202ENST00000436395 UHRF1BP1LA0JNW5 1464 aa28.2■■■□□ 2.1
LINC02558-202ENST00000436395 UACAQ9BZF9 1416 aa28.18■■■□□ 2.1
LINC02558-202ENST00000436395 TSPOAP1O95153 1857 aa28.17■■■□□ 2.1
LINC02558-202ENST00000436395 KIAA0556O60303 1618 aa28.16■■■□□ 2.1
LINC02558-202ENST00000436395 ASXL2Q76L83 1435 aa28.14■■■□□ 2.1
LINC02558-202ENST00000436395 CTTNBP2Q8WZ74 1663 aa28.12■■■□□ 2.09
LINC02558-202ENST00000436395 PLB1Q6P1J6 1458 aa28.11■■■□□ 2.09
LINC02558-202ENST00000436395 KDM6BO15054 1643 aa28.09■■■□□ 2.09
LINC02558-202ENST00000436395 PRXQ9BXM0 1461 aa28.08■■■□□ 2.09
LINC02558-202ENST00000436395 KDM5BQ9UGL1 1544 aa28.08■■■□□ 2.08
LINC02558-202ENST00000436395 GLI2P10070 1586 aa28.06■■■□□ 2.08
LINC02558-202ENST00000436395 ZCCHC11Q5TAX3 1644 aaKnown RBP28.02■■■□□ 2.08
LINC02558-202ENST00000436395 PPRC1Q5VV67 1664 aaKnown RBP28■■■□□ 2.07
LINC02558-202ENST00000436395 GOLGA3Q08378 1498 aa27.98■■■□□ 2.07
LINC02558-202ENST00000436395 EPRSP07814 1512 aaKnown RBP27.97■■■□□ 2.07
LINC02558-202ENST00000436395 MAP3K4Q9Y6R4 1608 aa27.91■■■□□ 2.06
LINC02558-202ENST00000436395 ABCA8O94911 1581 aa27.9■■■□□ 2.06
LINC02558-202ENST00000436395 WDR7Q9Y4E6 1490 aa27.87■■■□□ 2.05
LINC02558-202ENST00000436395 CSRNP3Q8WYN3 585 aa27.86■■■□□ 2.05
LINC02558-202ENST00000436395 COL17A1Q9UMD9 1497 aaPredicted RBP27.82■■■□□ 2.04
LINC02558-202ENST00000436395 KDM4FA0A1W2PPD8 638 aa27.81■■■□□ 2.04
LINC02558-202ENST00000436395 TEX14Q8IWB6 1497 aa27.79■■■□□ 2.04
LINC02558-202ENST00000436395 P3H3Q8IVL6 736 aa27.78■■■□□ 2.04
LINC02558-202ENST00000436395 EEA1Q15075 1411 aa27.74■■■□□ 2.03
LINC02558-202ENST00000436395 SAMD9Q5K651 1589 aa27.73■■■□□ 2.03
LINC02558-202ENST00000436395 KCNH8Q96L42 1107 aa27.72■■■□□ 2.03
LINC02558-202ENST00000436395 CFAP43Q8NDM7 1665 aa27.7■■■□□ 2.02
LINC02558-202ENST00000436395 CD109Q6YHK3 1445 aa27.69■■■□□ 2.02
LINC02558-202ENST00000436395 ARID3CA6NKF2 412 aa27.68■■■□□ 2.02
LINC02558-202ENST00000436395 MAGI3Q5TCQ9 1506 aa27.67■■■□□ 2.02
LINC02558-202ENST00000436395 ATP10BO94823 1461 aa27.67■■■□□ 2.02
LINC02558-202ENST00000436395 FAM9AQ8IZU1 332 aaPredicted RBP27.65■■■□□ 2.02
LINC02558-202ENST00000436395 RAPGEF6Q8TEU7 1601 aa27.6■■■□□ 2.01
LINC02558-202ENST00000436395 ADGRL1O94910 1474 aa27.58■■■□□ 2.01
LINC02558-202ENST00000436395 RANGAP1P46060 587 aaPredicted RBP27.58■■■□□ 2.01
LINC02558-202ENST00000436395 FHOD3Q2V2M9 1422 aa27.56■■■□□ 2
LINC02558-202ENST00000436395 KIF21BO75037 1637 aa27.55■■■□□ 2
LINC02558-202ENST00000436395 NUP153P49790 1475 aaKnown RBP27.51■■■□□ 2
LINC02558-202ENST00000436395 ABCA9Q8IUA7 1624 aa27.51■■□□□ 1.99
LINC02558-202ENST00000436395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.46■■□□□ 1.99
LINC02558-202ENST00000436395 HNRNPUL2Q1KMD3 747 aaKnown RBP27.46■■□□□ 1.99
LINC02558-202ENST00000436395 ARAP3Q8WWN8 1544 aa27.46■■□□□ 1.99
LINC02558-202ENST00000436395 EFCAB5A4FU69 1503 aa27.45■■□□□ 1.98
LINC02558-202ENST00000436395 CHIC1Q5VXU3 224 aa27.42■■□□□ 1.98
LINC02558-202ENST00000436395 PHLDB1Q86UU1 1377 aa27.37■■□□□ 1.97
LINC02558-202ENST00000436395 EHMT2Q96KQ7 1210 aa27.36■■□□□ 1.97
LINC02558-202ENST00000436395 NEO1Q92859 1461 aa27.34■■□□□ 1.97
LINC02558-202ENST00000436395 PLEKHD1A6NEE1 506 aa27.32■■□□□ 1.96
LINC02558-202ENST00000436395 UBTFP17480 764 aaKnown RBP27.32■■□□□ 1.96
LINC02558-202ENST00000436395 RAPGEF3O95398 923 aa27.3■■□□□ 1.96
LINC02558-202ENST00000436395 FRMPD1Q5SYB0 1578 aa27.26■■□□□ 1.96
LINC02558-202ENST00000436395 CDK13Q14004 1512 aaKnown RBP27.26■■□□□ 1.96
LINC02558-202ENST00000436395 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.26■■□□□ 1.95
LINC02558-202ENST00000436395 ARHGAP35Q9NRY4 1499 aa27.24■■□□□ 1.95
LINC02558-202ENST00000436395 TTC37Q6PGP7 1564 aa27.22■■□□□ 1.95
LINC02558-202ENST00000436395 HECW2Q9P2P5 1572 aa27.19■■□□□ 1.94
LINC02558-202ENST00000436395 FMN1Q68DA7 1419 aa27.19■■□□□ 1.94
LINC02558-202ENST00000436395 AKNAQ7Z591 1439 aa27.18■■□□□ 1.94
LINC02558-202ENST00000436395 FANCAO15360 1455 aa27.18■■□□□ 1.94
LINC02558-202ENST00000436395 CFAP74Q9C0B2 1584 aa27.16■■□□□ 1.94
LINC02558-202ENST00000436395 RICTORQ6R327 1708 aa27.16■■□□□ 1.94
LINC02558-202ENST00000436395 HECW1Q76N89 1606 aa27.16■■□□□ 1.94
LINC02558-202ENST00000436395 DENND4BO75064 1496 aaPredicted RBP27.15■■□□□ 1.94
LINC02558-202ENST00000436395 ATP1B4Q9UN42 357 aaPredicted RBP27.14■■□□□ 1.94
LINC02558-202ENST00000436395 ADAMTSL3P82987 1691 aa27.13■■□□□ 1.93
LINC02558-202ENST00000436395 ARHGEF40Q8TER5 1519 aa27.1■■□□□ 1.93
LINC02558-202ENST00000436395 BCORL1Q5H9F3 1711 aa27.07■■□□□ 1.92
LINC02558-202ENST00000436395 PLCH2O75038 1416 aa27.07■■□□□ 1.92
LINC02558-202ENST00000436395 PTPRMP28827 1452 aa27.05■■□□□ 1.92
LINC02558-202ENST00000436395 ARID4BQ4LE39 1312 aaPredicted RBP27.04■■□□□ 1.92
LINC02558-202ENST00000436395 ZMYM4Q5VZL5 1548 aa27.04■■□□□ 1.92
LINC02558-202ENST00000436395 LRRIQ1Q96JM4 1722 aa27.04■■□□□ 1.92
LINC02558-202ENST00000436395 KIF14Q15058 1648 aa27.03■■□□□ 1.92
LINC02558-202ENST00000436395 CDK11AQ9UQ88 783 aaPredicted RBP27.02■■□□□ 1.92
LINC02558-202ENST00000436395 MADDQ8WXG6 1647 aa27.01■■□□□ 1.91
LINC02558-202ENST00000436395 MYO5CQ9NQX4 1742 aa27■■□□□ 1.91
LINC02558-202ENST00000436395 TROQ12816 1431 aaPredicted RBP26.99■■□□□ 1.91
LINC02558-202ENST00000436395 SCAPERQ9BY12 1400 aa26.99■■□□□ 1.91
LINC02558-202ENST00000436395 YEATS2Q9ULM3 1422 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms