RNA–Protein interactions for RNA: ENST00000436280.5

GPN1-204, Transcript of GPN-loop GTPase 1, humanhuman

TSL 2

Gene GPN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-204ENST00000436280 CARMIL1Q5VZK9 1371 aa23.93■■□□□ 1.42
GPN1-204ENST00000436280 PRG4Q92954 1404 aaPredicted RBP23.92■■□□□ 1.42
GPN1-204ENST00000436280 KIAA0586Q9BVV6 1533 aa23.89■■□□□ 1.41
GPN1-204ENST00000436280 TRHP20396 242 aaPredicted RBP23.88■■□□□ 1.41
GPN1-204ENST00000436280 RAPGEF2Q9Y4G8 1499 aa23.77■■□□□ 1.4
GPN1-204ENST00000436280 IQGAP2Q13576 1575 aa23.7■■□□□ 1.38
GPN1-204ENST00000436280 CARMIL2Q6F5E8 1435 aa23.67■■□□□ 1.38
GPN1-204ENST00000436280 NPM1P06748 294 aaKnown RBP eCLIP23.62■■□□□ 1.37
GPN1-204ENST00000436280 PTPRGP23470 1445 aa23.6■■□□□ 1.37
GPN1-204ENST00000436280 TNIKQ9UKE5 1360 aa23.6■■□□□ 1.37
GPN1-204ENST00000436280 PRXQ9BXM0 1461 aa23.6■■□□□ 1.37
GPN1-204ENST00000436280 UGGT2Q9NYU1 1516 aa23.56■■□□□ 1.36
GPN1-204ENST00000436280 ADCY10Q96PN6 1610 aa23.55■■□□□ 1.36
GPN1-204ENST00000436280 CTTNBP2Q8WZ74 1663 aa23.55■■□□□ 1.36
GPN1-204ENST00000436280 DISP1Q96F81 1524 aa23.54■■□□□ 1.36
GPN1-204ENST00000436280 EEA1Q15075 1411 aa23.53■■□□□ 1.36
GPN1-204ENST00000436280 CSRNP3Q8WYN3 585 aa23.53■■□□□ 1.36
GPN1-204ENST00000436280 TTBK1Q5TCY1 1321 aaPredicted RBP23.53■■□□□ 1.36
GPN1-204ENST00000436280 MAPKBP1O60336 1514 aa23.5■■□□□ 1.35
GPN1-204ENST00000436280 KIF13AQ9H1H9 1805 aa23.49■■□□□ 1.35
GPN1-204ENST00000436280 KIAA0556O60303 1618 aa23.47■■□□□ 1.35
GPN1-204ENST00000436280 GOLGA3Q08378 1498 aa23.45■■□□□ 1.34
GPN1-204ENST00000436280 ABCC10Q5T3U5 1492 aa23.43■■□□□ 1.34
GPN1-204ENST00000436280 UACAQ9BZF9 1416 aa23.43■■□□□ 1.34
GPN1-204ENST00000436280 ABCC2Q92887 1545 aa23.43■■□□□ 1.34
GPN1-204ENST00000436280 UHRF1BP1LA0JNW5 1464 aa23.43■■□□□ 1.34
GPN1-204ENST00000436280 FAM69CQ0P6D2 419 aa23.4■■□□□ 1.34
GPN1-204ENST00000436280 CHIC1Q5VXU3 224 aa23.38■■□□□ 1.33
GPN1-204ENST00000436280 FAM9AQ8IZU1 332 aaPredicted RBP23.36■■□□□ 1.33
GPN1-204ENST00000436280 DIP2BQ9P265 1576 aa23.35■■□□□ 1.33
GPN1-204ENST00000436280 PLB1Q6P1J6 1458 aa23.31■■□□□ 1.32
GPN1-204ENST00000436280 KDM5BQ9UGL1 1544 aa23.3■■□□□ 1.32
GPN1-204ENST00000436280 ASXL2Q76L83 1435 aa23.3■■□□□ 1.32
GPN1-204ENST00000436280 KIF21BO75037 1637 aa23.26■■□□□ 1.31
GPN1-204ENST00000436280 ZCCHC11Q5TAX3 1644 aaKnown RBP23.23■■□□□ 1.31
GPN1-204ENST00000436280 ABCA8O94911 1581 aa23.23■■□□□ 1.31
GPN1-204ENST00000436280 SAMD9Q5K651 1589 aa23.22■■□□□ 1.31
GPN1-204ENST00000436280 P3H3Q8IVL6 736 aa23.21■■□□□ 1.31
GPN1-204ENST00000436280 TSPOAP1O95153 1857 aa23.2■■□□□ 1.3
GPN1-204ENST00000436280 GLI2P10070 1586 aa23.19■■□□□ 1.3
GPN1-204ENST00000436280 EPRSP07814 1512 aaKnown RBP23.16■■□□□ 1.3
GPN1-204ENST00000436280 WDR7Q9Y4E6 1490 aa23.15■■□□□ 1.3
GPN1-204ENST00000436280 RANGAP1P46060 587 aaPredicted RBP23.14■■□□□ 1.29
GPN1-204ENST00000436280 UBTFP17480 764 aaKnown RBP23.11■■□□□ 1.29
GPN1-204ENST00000436280 EFCAB5A4FU69 1503 aa23.1■■□□□ 1.29
GPN1-204ENST00000436280 KDM6BO15054 1643 aa23.08■■□□□ 1.28
GPN1-204ENST00000436280 PPRC1Q5VV67 1664 aaKnown RBP23.07■■□□□ 1.28
GPN1-204ENST00000436280 FHOD3Q2V2M9 1422 aa23.07■■□□□ 1.28
GPN1-204ENST00000436280 EHMT2Q96KQ7 1210 aa23.06■■□□□ 1.28
GPN1-204ENST00000436280 RAPGEF6Q8TEU7 1601 aa23.06■■□□□ 1.28
GPN1-204ENST00000436280 MAP3K4Q9Y6R4 1608 aa23.06■■□□□ 1.28
GPN1-204ENST00000436280 ATP10BO94823 1461 aa23.04■■□□□ 1.28
GPN1-204ENST00000436280 TEX14Q8IWB6 1497 aa23.04■■□□□ 1.28
GPN1-204ENST00000436280 ARID3CA6NKF2 412 aa23.03■■□□□ 1.28
GPN1-204ENST00000436280 KCNH8Q96L42 1107 aa23.02■■□□□ 1.28
GPN1-204ENST00000436280 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.98■■□□□ 1.27
GPN1-204ENST00000436280 HNRNPUL2Q1KMD3 747 aaKnown RBP22.98■■□□□ 1.27
GPN1-204ENST00000436280 CD109Q6YHK3 1445 aa22.97■■□□□ 1.27
GPN1-204ENST00000436280 NUP153P49790 1475 aaKnown RBP22.97■■□□□ 1.27
GPN1-204ENST00000436280 CFAP43Q8NDM7 1665 aa22.97■■□□□ 1.27
GPN1-204ENST00000436280 MAGI3Q5TCQ9 1506 aa22.93■■□□□ 1.26
GPN1-204ENST00000436280 AEBP2Q6ZN18 517 aaPredicted RBP22.91■■□□□ 1.26
GPN1-204ENST00000436280 FMN1Q68DA7 1419 aa22.91■■□□□ 1.26
GPN1-204ENST00000436280 ARHGAP35Q9NRY4 1499 aa22.9■■□□□ 1.26
GPN1-204ENST00000436280 PLEKHD1A6NEE1 506 aa22.87■■□□□ 1.25
GPN1-204ENST00000436280 ABCA9Q8IUA7 1624 aa22.85■■□□□ 1.25
GPN1-204ENST00000436280 COL17A1Q9UMD9 1497 aaPredicted RBP22.85■■□□□ 1.25
GPN1-204ENST00000436280 HECW1Q76N89 1606 aa22.8■■□□□ 1.24
GPN1-204ENST00000436280 ATP1B4Q9UN42 357 aaPredicted RBP22.8■■□□□ 1.24
GPN1-204ENST00000436280 PHLDB1Q86UU1 1377 aa22.78■■□□□ 1.24
GPN1-204ENST00000436280 CDK13Q14004 1512 aaKnown RBP22.77■■□□□ 1.24
GPN1-204ENST00000436280 ARAP3Q8WWN8 1544 aa22.74■■□□□ 1.23
GPN1-204ENST00000436280 CDK11AQ9UQ88 783 aaPredicted RBP22.74■■□□□ 1.23
GPN1-204ENST00000436280 NEO1Q92859 1461 aa22.73■■□□□ 1.23
GPN1-204ENST00000436280 CLIP1P30622 1438 aa22.7■■□□□ 1.22
GPN1-204ENST00000436280 LRRIQ1Q96JM4 1722 aa22.69■■□□□ 1.22
GPN1-204ENST00000436280 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.69■■□□□ 1.22
GPN1-204ENST00000436280 CASKIN1Q8WXD9 1431 aa22.66■■□□□ 1.22
GPN1-204ENST00000436280 KDM4FA0A1W2PPD8 638 aa22.65■■□□□ 1.22
GPN1-204ENST00000436280 TTC37Q6PGP7 1564 aa22.64■■□□□ 1.22
GPN1-204ENST00000436280 CFAP74Q9C0B2 1584 aa22.63■■□□□ 1.21
GPN1-204ENST00000436280 FANCAO15360 1455 aa22.63■■□□□ 1.21
GPN1-204ENST00000436280 CCDC18Q5T9S5 1454 aa22.63■■□□□ 1.21
GPN1-204ENST00000436280 PCF11O94913 1555 aaKnown RBP22.63■■□□□ 1.21
GPN1-204ENST00000436280 TROQ12816 1431 aaPredicted RBP22.61■■□□□ 1.21
GPN1-204ENST00000436280 FYCO1Q9BQS8 1478 aa22.6■■□□□ 1.21
GPN1-204ENST00000436280 AKNAQ7Z591 1439 aa22.59■■□□□ 1.21
GPN1-204ENST00000436280 RAPGEF3O95398 923 aa22.59■■□□□ 1.21
GPN1-204ENST00000436280 KIF14Q15058 1648 aa22.59■■□□□ 1.21
GPN1-204ENST00000436280 ADGRL1O94910 1474 aa22.59■■□□□ 1.21
GPN1-204ENST00000436280 PLCH2O75038 1416 aa22.58■■□□□ 1.21
GPN1-204ENST00000436280 DENND4BO75064 1496 aaPredicted RBP22.56■■□□□ 1.2
GPN1-204ENST00000436280 MYO5CQ9NQX4 1742 aa22.52■■□□□ 1.2
GPN1-204ENST00000436280 FRMPD1Q5SYB0 1578 aa22.52■■□□□ 1.2
GPN1-204ENST00000436280 CEP162Q5TB80 1403 aa22.52■■□□□ 1.2
GPN1-204ENST00000436280 EFCAB2Q5VUJ9 269 aa22.52■■□□□ 1.2
GPN1-204ENST00000436280 RICTORQ6R327 1708 aa22.48■■□□□ 1.19
GPN1-204ENST00000436280 SCAPERQ9BY12 1400 aa22.47■■□□□ 1.19
GPN1-204ENST00000436280 ARHGAP5Q13017 1502 aa22.47■■□□□ 1.19
GPN1-204ENST00000436280 ZMYM4Q5VZL5 1548 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms