RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 JPH4Q96JJ6 628 aa19.42■□□□□ 0.7
SPTLC1P4-201ENST00000435997 IGF1RP08069 1367 aa19.4■□□□□ 0.7
SPTLC1P4-201ENST00000435997 SENP3Q9H4L4 574 aaPredicted RBP19.39■□□□□ 0.69
SPTLC1P4-201ENST00000435997 KIF27Q86VH2 1401 aa19.38■□□□□ 0.69
SPTLC1P4-201ENST00000435997 KIAA0586Q9BVV6 1533 aa19.36■□□□□ 0.69
SPTLC1P4-201ENST00000435997 CUL7Q14999 1698 aa19.34■□□□□ 0.69
SPTLC1P4-201ENST00000435997 MAPKBP1O60336 1514 aa19.31■□□□□ 0.68
SPTLC1P4-201ENST00000435997 ABCC10Q5T3U5 1492 aa19.28■□□□□ 0.68
SPTLC1P4-201ENST00000435997 KIF13AQ9H1H9 1805 aa19.28■□□□□ 0.68
SPTLC1P4-201ENST00000435997 ADCY10Q96PN6 1610 aa19.28■□□□□ 0.68
SPTLC1P4-201ENST00000435997 CARMIL1Q5VZK9 1371 aa19.23■□□□□ 0.67
SPTLC1P4-201ENST00000435997 DIP2BQ9P265 1576 aa19.23■□□□□ 0.67
SPTLC1P4-201ENST00000435997 FAM69CQ0P6D2 419 aa19.16■□□□□ 0.66
SPTLC1P4-201ENST00000435997 NPM1P06748 294 aaKnown RBP eCLIP19.15■□□□□ 0.66
SPTLC1P4-201ENST00000435997 IQGAP2Q13576 1575 aa19.15■□□□□ 0.66
SPTLC1P4-201ENST00000435997 PTPRGP23470 1445 aa19.14■□□□□ 0.65
SPTLC1P4-201ENST00000435997 TNIKQ9UKE5 1360 aa19.13■□□□□ 0.65
SPTLC1P4-201ENST00000435997 ABCC2Q92887 1545 aa19.11■□□□□ 0.65
SPTLC1P4-201ENST00000435997 CARMIL2Q6F5E8 1435 aa19.11■□□□□ 0.65
SPTLC1P4-201ENST00000435997 DISP1Q96F81 1524 aa19.1■□□□□ 0.65
SPTLC1P4-201ENST00000435997 UHRF1BP1LA0JNW5 1464 aa19.09■□□□□ 0.65
SPTLC1P4-201ENST00000435997 UGGT2Q9NYU1 1516 aa19.07■□□□□ 0.64
SPTLC1P4-201ENST00000435997 RAPGEF2Q9Y4G8 1499 aa19.07■□□□□ 0.64
SPTLC1P4-201ENST00000435997 UACAQ9BZF9 1416 aa19.03■□□□□ 0.64
SPTLC1P4-201ENST00000435997 ASXL2Q76L83 1435 aa19.02■□□□□ 0.64
SPTLC1P4-201ENST00000435997 PLB1Q6P1J6 1458 aa19.02■□□□□ 0.63
SPTLC1P4-201ENST00000435997 KDM6BO15054 1643 aa19.01■□□□□ 0.63
SPTLC1P4-201ENST00000435997 GLI2P10070 1586 aa19.01■□□□□ 0.63
SPTLC1P4-201ENST00000435997 KDM5BQ9UGL1 1544 aa19■□□□□ 0.63
SPTLC1P4-201ENST00000435997 KIAA0556O60303 1618 aa18.99■□□□□ 0.63
SPTLC1P4-201ENST00000435997 PHF23Q9BUL5 403 aaPredicted RBP18.98■□□□□ 0.63
SPTLC1P4-201ENST00000435997 TTBK1Q5TCY1 1321 aaPredicted RBP18.95■□□□□ 0.62
SPTLC1P4-201ENST00000435997 PPRC1Q5VV67 1664 aaKnown RBP18.95■□□□□ 0.62
SPTLC1P4-201ENST00000435997 EPRSP07814 1512 aaKnown RBP18.93■□□□□ 0.62
SPTLC1P4-201ENST00000435997 PRXQ9BXM0 1461 aa18.92■□□□□ 0.62
SPTLC1P4-201ENST00000435997 TSPOAP1O95153 1857 aa18.9■□□□□ 0.62
SPTLC1P4-201ENST00000435997 ZCCHC11Q5TAX3 1644 aaKnown RBP18.89■□□□□ 0.61
SPTLC1P4-201ENST00000435997 MAP3K4Q9Y6R4 1608 aa18.89■□□□□ 0.61
SPTLC1P4-201ENST00000435997 KDM4FA0A1W2PPD8 638 aa18.87■□□□□ 0.61
SPTLC1P4-201ENST00000435997 CTTNBP2Q8WZ74 1663 aa18.86■□□□□ 0.61
SPTLC1P4-201ENST00000435997 COL17A1Q9UMD9 1497 aaPredicted RBP18.85■□□□□ 0.61
SPTLC1P4-201ENST00000435997 WDR7Q9Y4E6 1490 aa18.85■□□□□ 0.61
SPTLC1P4-201ENST00000435997 GOLGA3Q08378 1498 aa18.84■□□□□ 0.61
SPTLC1P4-201ENST00000435997 ABCA8O94911 1581 aa18.84■□□□□ 0.61
SPTLC1P4-201ENST00000435997 TEX14Q8IWB6 1497 aa18.82■□□□□ 0.6
SPTLC1P4-201ENST00000435997 MAGI3Q5TCQ9 1506 aa18.74■□□□□ 0.59
SPTLC1P4-201ENST00000435997 ADGRL1O94910 1474 aa18.72■□□□□ 0.59
SPTLC1P4-201ENST00000435997 CD109Q6YHK3 1445 aa18.69■□□□□ 0.58
SPTLC1P4-201ENST00000435997 CFAP43Q8NDM7 1665 aa18.69■□□□□ 0.58
SPTLC1P4-201ENST00000435997 SAMD9Q5K651 1589 aa18.68■□□□□ 0.58
SPTLC1P4-201ENST00000435997 ATP10BO94823 1461 aa18.65■□□□□ 0.58
SPTLC1P4-201ENST00000435997 CSRNP3Q8WYN3 585 aa18.63■□□□□ 0.57
SPTLC1P4-201ENST00000435997 EEA1Q15075 1411 aa18.62■□□□□ 0.57
SPTLC1P4-201ENST00000435997 ARAP3Q8WWN8 1544 aa18.59■□□□□ 0.57
SPTLC1P4-201ENST00000435997 KCNH8Q96L42 1107 aa18.59■□□□□ 0.57
SPTLC1P4-201ENST00000435997 ABCA9Q8IUA7 1624 aa18.58■□□□□ 0.56
SPTLC1P4-201ENST00000435997 RAPGEF6Q8TEU7 1601 aa18.56■□□□□ 0.56
SPTLC1P4-201ENST00000435997 P3H3Q8IVL6 736 aa18.56■□□□□ 0.56
SPTLC1P4-201ENST00000435997 NUP153P49790 1475 aaKnown RBP18.56■□□□□ 0.56
SPTLC1P4-201ENST00000435997 ARID3CA6NKF2 412 aa18.53■□□□□ 0.56
SPTLC1P4-201ENST00000435997 PHLDB1Q86UU1 1377 aa18.53■□□□□ 0.56
SPTLC1P4-201ENST00000435997 FHOD3Q2V2M9 1422 aa18.51■□□□□ 0.55
SPTLC1P4-201ENST00000435997 FAM9AQ8IZU1 332 aaPredicted RBP18.5■□□□□ 0.55
SPTLC1P4-201ENST00000435997 NEO1Q92859 1461 aa18.5■□□□□ 0.55
SPTLC1P4-201ENST00000435997 KIF21BO75037 1637 aa18.49■□□□□ 0.55
SPTLC1P4-201ENST00000435997 HECW2Q9P2P5 1572 aa18.48■□□□□ 0.55
SPTLC1P4-201ENST00000435997 EFCAB5A4FU69 1503 aa18.47■□□□□ 0.55
SPTLC1P4-201ENST00000435997 FRMPD1Q5SYB0 1578 aa18.46■□□□□ 0.55
SPTLC1P4-201ENST00000435997 RAPGEF3O95398 923 aa18.39■□□□□ 0.53
SPTLC1P4-201ENST00000435997 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.38■□□□□ 0.53
SPTLC1P4-201ENST00000435997 ADAMTSL3P82987 1691 aa18.38■□□□□ 0.53
SPTLC1P4-201ENST00000435997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.37■□□□□ 0.53
SPTLC1P4-201ENST00000435997 HNRNPUL2Q1KMD3 747 aaKnown RBP18.37■□□□□ 0.53
SPTLC1P4-201ENST00000435997 ARHGEF40Q8TER5 1519 aa18.36■□□□□ 0.53
SPTLC1P4-201ENST00000435997 RANGAP1P46060 587 aaPredicted RBP18.35■□□□□ 0.53
SPTLC1P4-201ENST00000435997 TTC37Q6PGP7 1564 aa18.34■□□□□ 0.53
SPTLC1P4-201ENST00000435997 FANCAO15360 1455 aa18.34■□□□□ 0.53
SPTLC1P4-201ENST00000435997 PLEKHD1A6NEE1 506 aa18.34■□□□□ 0.53
SPTLC1P4-201ENST00000435997 PTPRMP28827 1452 aa18.33■□□□□ 0.53
SPTLC1P4-201ENST00000435997 CDK13Q14004 1512 aaKnown RBP18.33■□□□□ 0.52
SPTLC1P4-201ENST00000435997 ZMYM4Q5VZL5 1548 aa18.33■□□□□ 0.52
SPTLC1P4-201ENST00000435997 DENND4BO75064 1496 aaPredicted RBP18.33■□□□□ 0.52
SPTLC1P4-201ENST00000435997 AKNAQ7Z591 1439 aa18.32■□□□□ 0.52
SPTLC1P4-201ENST00000435997 CFAP74Q9C0B2 1584 aa18.32■□□□□ 0.52
SPTLC1P4-201ENST00000435997 RICTORQ6R327 1708 aa18.32■□□□□ 0.52
SPTLC1P4-201ENST00000435997 ILDR1Q86SU0 546 aaPredicted RBP18.31■□□□□ 0.52
SPTLC1P4-201ENST00000435997 BCORL1Q5H9F3 1711 aa18.3■□□□□ 0.52
SPTLC1P4-201ENST00000435997 ARHGAP35Q9NRY4 1499 aa18.3■□□□□ 0.52
SPTLC1P4-201ENST00000435997 FMN1Q68DA7 1419 aa18.28■□□□□ 0.52
SPTLC1P4-201ENST00000435997 MADDQ8WXG6 1647 aa18.27■□□□□ 0.51
SPTLC1P4-201ENST00000435997 PLCH2O75038 1416 aa18.26■□□□□ 0.51
SPTLC1P4-201ENST00000435997 HECW1Q76N89 1606 aa18.26■□□□□ 0.51
SPTLC1P4-201ENST00000435997 MAGI2Q86UL8 1455 aa18.25■□□□□ 0.51
SPTLC1P4-201ENST00000435997 POGZQ7Z3K3 1410 aa18.24■□□□□ 0.51
SPTLC1P4-201ENST00000435997 YEATS2Q9ULM3 1422 aa18.23■□□□□ 0.51
SPTLC1P4-201ENST00000435997 ZFYVE16Q7Z3T8 1539 aa18.23■□□□□ 0.51
SPTLC1P4-201ENST00000435997 PCF11O94913 1555 aaKnown RBP18.21■□□□□ 0.51
SPTLC1P4-201ENST00000435997 SIGLEC1Q9BZZ2 1709 aa18.2■□□□□ 0.5
SPTLC1P4-201ENST00000435997 LMTK3Q96Q04 1460 aa18.2■□□□□ 0.5
SPTLC1P4-201ENST00000435997 UBTFP17480 764 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms