RNA–Protein interactions for RNA: ENST00000435781.5

GTF3A-203, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-203ENST00000435781 ERCC6L2Q5T890 1561 aa35.3■■■■□ 3.24
GTF3A-203ENST00000435781 KIAA0586Q9BVV6 1533 aa35.27■■■■□ 3.24
GTF3A-203ENST00000435781 CYB5RLQ6IPT4 315 aa35.26■■■■□ 3.24
GTF3A-203ENST00000435781 JPH4Q96JJ6 628 aa35.21■■■■□ 3.23
GTF3A-203ENST00000435781 PRXQ9BXM0 1461 aa35.19■■■■□ 3.22
GTF3A-203ENST00000435781 EEA1Q15075 1411 aa35.18■■■■□ 3.22
GTF3A-203ENST00000435781 PRG4Q92954 1404 aaPredicted RBP35.17■■■■□ 3.22
GTF3A-203ENST00000435781 IQGAP2Q13576 1575 aa35.13■■■■□ 3.21
GTF3A-203ENST00000435781 CSRNP3Q8WYN3 585 aa35.1■■■■□ 3.21
GTF3A-203ENST00000435781 CTTNBP2Q8WZ74 1663 aa35.09■■■■□ 3.21
GTF3A-203ENST00000435781 FAM9AQ8IZU1 332 aaPredicted RBP35■■■■□ 3.19
GTF3A-203ENST00000435781 UGGT2Q9NYU1 1516 aa34.92■■■■□ 3.18
GTF3A-203ENST00000435781 KIF21BO75037 1637 aa34.89■■■■□ 3.18
GTF3A-203ENST00000435781 CARMIL2Q6F5E8 1435 aa34.88■■■■□ 3.17
GTF3A-203ENST00000435781 DISP1Q96F81 1524 aa34.86■■■■□ 3.17
GTF3A-203ENST00000435781 KIAA0556O60303 1618 aa34.8■■■■□ 3.16
GTF3A-203ENST00000435781 TNIKQ9UKE5 1360 aa34.76■■■■□ 3.16
GTF3A-203ENST00000435781 PTPRGP23470 1445 aa34.74■■■■□ 3.15
GTF3A-203ENST00000435781 ADCY10Q96PN6 1610 aa34.72■■■■□ 3.15
GTF3A-203ENST00000435781 GOLGA3Q08378 1498 aa34.7■■■■□ 3.15
GTF3A-203ENST00000435781 TTBK1Q5TCY1 1321 aaPredicted RBP34.65■■■■□ 3.14
GTF3A-203ENST00000435781 SAMD9Q5K651 1589 aa34.58■■■■□ 3.13
GTF3A-203ENST00000435781 EHMT2Q96KQ7 1210 aa34.54■■■■□ 3.12
GTF3A-203ENST00000435781 TRHP20396 242 aaPredicted RBP34.53■■■■□ 3.12
GTF3A-203ENST00000435781 UACAQ9BZF9 1416 aa34.52■■■■□ 3.12
GTF3A-203ENST00000435781 UHRF1BP1LA0JNW5 1464 aa34.52■■■■□ 3.12
GTF3A-203ENST00000435781 ABCC2Q92887 1545 aa34.5■■■■□ 3.11
GTF3A-203ENST00000435781 NPM1P06748 294 aaKnown RBP eCLIP34.48■■■■□ 3.11
GTF3A-203ENST00000435781 UBTFP17480 764 aaKnown RBP34.48■■■■□ 3.11
GTF3A-203ENST00000435781 MAPKBP1O60336 1514 aa34.46■■■■□ 3.11
GTF3A-203ENST00000435781 P3H3Q8IVL6 736 aa34.43■■■■□ 3.1
GTF3A-203ENST00000435781 RANGAP1P46060 587 aaPredicted RBP34.42■■■■□ 3.1
GTF3A-203ENST00000435781 ABCA8O94911 1581 aa34.41■■■■□ 3.1
GTF3A-203ENST00000435781 PLB1Q6P1J6 1458 aa34.41■■■■□ 3.1
GTF3A-203ENST00000435781 EFCAB5A4FU69 1503 aa34.4■■■■□ 3.1
GTF3A-203ENST00000435781 KIF13AQ9H1H9 1805 aa34.39■■■■□ 3.1
GTF3A-203ENST00000435781 KDM5BQ9UGL1 1544 aa34.35■■■■□ 3.09
GTF3A-203ENST00000435781 ZCCHC11Q5TAX3 1644 aaKnown RBP34.34■■■■□ 3.09
GTF3A-203ENST00000435781 FHOD3Q2V2M9 1422 aa34.33■■■■□ 3.09
GTF3A-203ENST00000435781 DIP2BQ9P265 1576 aa34.28■■■■□ 3.08
GTF3A-203ENST00000435781 ABCC10Q5T3U5 1492 aa34.27■■■■□ 3.08
GTF3A-203ENST00000435781 RAPGEF6Q8TEU7 1601 aa34.25■■■■□ 3.07
GTF3A-203ENST00000435781 ASXL2Q76L83 1435 aa34.23■■■■□ 3.07
GTF3A-203ENST00000435781 ARHGAP35Q9NRY4 1499 aa34.21■■■■□ 3.07
GTF3A-203ENST00000435781 FAM69CQ0P6D2 419 aa34.15■■■■□ 3.06
GTF3A-203ENST00000435781 ATP10BO94823 1461 aa34.09■■■■□ 3.05
GTF3A-203ENST00000435781 NUP153P49790 1475 aaKnown RBP34.08■■■■□ 3.05
GTF3A-203ENST00000435781 WDR7Q9Y4E6 1490 aa34.07■■■■□ 3.05
GTF3A-203ENST00000435781 GLI2P10070 1586 aa34.06■■■■□ 3.04
GTF3A-203ENST00000435781 TSPOAP1O95153 1857 aa34.05■■■■□ 3.04
GTF3A-203ENST00000435781 ARID3CA6NKF2 412 aa34.05■■■■□ 3.04
GTF3A-203ENST00000435781 FMN1Q68DA7 1419 aa34.04■■■■□ 3.04
GTF3A-203ENST00000435781 EPRSP07814 1512 aaKnown RBP34.04■■■■□ 3.04
GTF3A-203ENST00000435781 CLIP1P30622 1438 aa33.99■■■■□ 3.03
GTF3A-203ENST00000435781 MAP3K4Q9Y6R4 1608 aa33.95■■■■□ 3.03
GTF3A-203ENST00000435781 HECW1Q76N89 1606 aa33.94■■■■□ 3.02
GTF3A-203ENST00000435781 PPRC1Q5VV67 1664 aaKnown RBP33.92■■■■□ 3.02
GTF3A-203ENST00000435781 LOC105371045A0A1W2PR82 267 aa33.88■■■■□ 3.01
GTF3A-203ENST00000435781 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.88■■■■□ 3.01
GTF3A-203ENST00000435781 HNRNPUL2Q1KMD3 747 aaKnown RBP33.88■■■■□ 3.01
GTF3A-203ENST00000435781 CDK13Q14004 1512 aaKnown RBP33.87■■■■□ 3.01
GTF3A-203ENST00000435781 CFAP43Q8NDM7 1665 aa33.87■■■■□ 3.01
GTF3A-203ENST00000435781 KCNH8Q96L42 1107 aa33.86■■■■□ 3.01
GTF3A-203ENST00000435781 CEP162Q5TB80 1403 aa33.86■■■■□ 3.01
GTF3A-203ENST00000435781 PCF11O94913 1555 aaKnown RBP33.85■■■■□ 3.01
GTF3A-203ENST00000435781 LRRIQ1Q96JM4 1722 aa33.85■■■■□ 3.01
GTF3A-203ENST00000435781 ATP1B4Q9UN42 357 aaPredicted RBP33.8■■■■□ 3
GTF3A-203ENST00000435781 CASKIN1Q8WXD9 1431 aa33.79■■■■□ 3
GTF3A-203ENST00000435781 ABCA9Q8IUA7 1624 aa33.77■■■■□ 3
GTF3A-203ENST00000435781 PLEKHD1A6NEE1 506 aa33.74■■■□□ 2.99
GTF3A-203ENST00000435781 FYCO1Q9BQS8 1478 aa33.74■■■□□ 2.99
GTF3A-203ENST00000435781 CD109Q6YHK3 1445 aa33.73■■■□□ 2.99
GTF3A-203ENST00000435781 TEX14Q8IWB6 1497 aa33.72■■■□□ 2.99
GTF3A-203ENST00000435781 KDM6BO15054 1643 aa33.71■■■□□ 2.99
GTF3A-203ENST00000435781 MAGI3Q5TCQ9 1506 aa33.69■■■□□ 2.98
GTF3A-203ENST00000435781 CCDC18Q5T9S5 1454 aa33.67■■■□□ 2.98
GTF3A-203ENST00000435781 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.6■■■□□ 2.972e-7■■■■□ 26.2
GTF3A-203ENST00000435781 CDK11AQ9UQ88 783 aaPredicted RBP33.59■■■□□ 2.97
GTF3A-203ENST00000435781 TTC37Q6PGP7 1564 aa33.59■■■□□ 2.97
GTF3A-203ENST00000435781 TROQ12816 1431 aaPredicted RBP33.56■■■□□ 2.96
GTF3A-203ENST00000435781 KIF14Q15058 1648 aa33.55■■■□□ 2.96
GTF3A-203ENST00000435781 COL17A1Q9UMD9 1497 aaPredicted RBP33.51■■■□□ 2.96
GTF3A-203ENST00000435781 MYO5CQ9NQX4 1742 aa33.46■■■□□ 2.95
GTF3A-203ENST00000435781 VPS8Q8N3P4 1428 aa33.45■■■□□ 2.94
GTF3A-203ENST00000435781 NEO1Q92859 1461 aa33.44■■■□□ 2.94
GTF3A-203ENST00000435781 CFAP74Q9C0B2 1584 aa33.42■■■□□ 2.94
GTF3A-203ENST00000435781 ARAP3Q8WWN8 1544 aa33.41■■■□□ 2.94
GTF3A-203ENST00000435781 PHLDB1Q86UU1 1377 aa33.39■■■□□ 2.94
GTF3A-203ENST00000435781 FANCAO15360 1455 aa33.37■■■□□ 2.93
GTF3A-203ENST00000435781 PLCH2O75038 1416 aa33.36■■■□□ 2.93
GTF3A-203ENST00000435781 CDC42BPBQ9Y5S2 1711 aa33.31■■■□□ 2.92
GTF3A-203ENST00000435781 CDC42BPAQ5VT25 1732 aa33.3■■■□□ 2.92
GTF3A-203ENST00000435781 AKNAQ7Z591 1439 aa33.29■■■□□ 2.92
GTF3A-203ENST00000435781 PREX2Q70Z35 1606 aa33.29■■■□□ 2.92
GTF3A-203ENST00000435781 MTUS2Q5JR59 1369 aa33.29■■■□□ 2.92
GTF3A-203ENST00000435781 TIAM1Q13009 1591 aa33.29■■■□□ 2.92
GTF3A-203ENST00000435781 EHBP1L1Q8N3D4 1523 aa33.28■■■□□ 2.92
GTF3A-203ENST00000435781 ARHGAP5Q13017 1502 aa33.25■■■□□ 2.91
GTF3A-203ENST00000435781 FRMPD1Q5SYB0 1578 aa33.25■■■□□ 2.91
GTF3A-203ENST00000435781 RICTORQ6R327 1708 aa33.25■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms