RNA–Protein interactions for RNA: ENST00000434290.5

RCC1-210, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-210ENST00000434290 FAM9AQ8IZU1 332 aaPredicted RBP22.22■■□□□ 1.15
RCC1-210ENST00000434290 SHROOM2Q13796 1616 aa22.2■■□□□ 1.15
RCC1-210ENST00000434290 JPH4Q96JJ6 628 aa22.2■■□□□ 1.14
RCC1-210ENST00000434290 KIAA0586Q9BVV6 1533 aa22.2■■□□□ 1.14
RCC1-210ENST00000434290 RAPGEF2Q9Y4G8 1499 aa22.17■■□□□ 1.14
RCC1-210ENST00000434290 KIF21BO75037 1637 aa22.14■■□□□ 1.14
RCC1-210ENST00000434290 PRG4Q92954 1404 aaPredicted RBP22.13■■□□□ 1.13
RCC1-210ENST00000434290 CSRNP3Q8WYN3 585 aa22.12■■□□□ 1.13
RCC1-210ENST00000434290 PRXQ9BXM0 1461 aa22.11■■□□□ 1.13
RCC1-210ENST00000434290 ERCC6L2Q5T890 1561 aa22.1■■□□□ 1.13
RCC1-210ENST00000434290 IQGAP2Q13576 1575 aa22.02■■□□□ 1.12
RCC1-210ENST00000434290 CARMIL2Q6F5E8 1435 aa21.97■■□□□ 1.11
RCC1-210ENST00000434290 GOLGA3Q08378 1498 aa21.97■■□□□ 1.11
RCC1-210ENST00000434290 CTTNBP2Q8WZ74 1663 aa21.95■■□□□ 1.1
RCC1-210ENST00000434290 UGGT2Q9NYU1 1516 aa21.92■■□□□ 1.1
RCC1-210ENST00000434290 EHMT2Q96KQ7 1210 aa21.9■■□□□ 1.1
RCC1-210ENST00000434290 TNIKQ9UKE5 1360 aa21.89■■□□□ 1.1
RCC1-210ENST00000434290 LOC105371045A0A1W2PR82 267 aa21.89■■□□□ 1.09
RCC1-210ENST00000434290 PTPRGP23470 1445 aa21.88■■□□□ 1.09
RCC1-210ENST00000434290 DISP1Q96F81 1524 aa21.87■■□□□ 1.09
RCC1-210ENST00000434290 TRHP20396 242 aaPredicted RBP21.82■■□□□ 1.08
RCC1-210ENST00000434290 NPM1P06748 294 aaKnown RBP eCLIP21.8■■□□□ 1.08
RCC1-210ENST00000434290 KIAA0556O60303 1618 aa21.8■■□□□ 1.08
RCC1-210ENST00000434290 ADCY10Q96PN6 1610 aa21.75■■□□□ 1.07
RCC1-210ENST00000434290 TTBK1Q5TCY1 1321 aaPredicted RBP21.75■■□□□ 1.07
RCC1-210ENST00000434290 UBTFP17480 764 aaKnown RBP21.74■■□□□ 1.07
RCC1-210ENST00000434290 UACAQ9BZF9 1416 aa21.72■■□□□ 1.07
RCC1-210ENST00000434290 UHRF1BP1LA0JNW5 1464 aa21.72■■□□□ 1.07
RCC1-210ENST00000434290 MAPKBP1O60336 1514 aa21.68■■□□□ 1.06
RCC1-210ENST00000434290 ABCC2Q92887 1545 aa21.68■■□□□ 1.06
RCC1-210ENST00000434290 SAMD9Q5K651 1589 aa21.65■■□□□ 1.06
RCC1-210ENST00000434290 CEP162Q5TB80 1403 aa21.64■■□□□ 1.06
RCC1-210ENST00000434290 P3H3Q8IVL6 736 aa21.61■■□□□ 1.05
RCC1-210ENST00000434290 KDM5BQ9UGL1 1544 aa21.6■■□□□ 1.05
RCC1-210ENST00000434290 ABCC10Q5T3U5 1492 aa21.59■■□□□ 1.05
RCC1-210ENST00000434290 PLB1Q6P1J6 1458 aa21.59■■□□□ 1.05
RCC1-210ENST00000434290 EFCAB5A4FU69 1503 aa21.58■■□□□ 1.04
RCC1-210ENST00000434290 ARHGAP35Q9NRY4 1499 aa21.58■■□□□ 1.04
RCC1-210ENST00000434290 ABCA8O94911 1581 aa21.57■■□□□ 1.04
RCC1-210ENST00000434290 CLIP1P30622 1438 aa21.57■■□□□ 1.04
RCC1-210ENST00000434290 RANGAP1P46060 587 aaPredicted RBP21.57■■□□□ 1.04
RCC1-210ENST00000434290 FAM69CQ0P6D2 419 aa21.55■■□□□ 1.04
RCC1-210ENST00000434290 AEBP2Q6ZN18 517 aaPredicted RBP21.53■■□□□ 1.04
RCC1-210ENST00000434290 ASXL2Q76L83 1435 aa21.53■■□□□ 1.04
RCC1-210ENST00000434290 KIF13AQ9H1H9 1805 aa21.52■■□□□ 1.04
RCC1-210ENST00000434290 DIP2BQ9P265 1576 aa21.51■■□□□ 1.03
RCC1-210ENST00000434290 FHOD3Q2V2M9 1422 aa21.5■■□□□ 1.03
RCC1-210ENST00000434290 ZCCHC11Q5TAX3 1644 aaKnown RBP21.49■■□□□ 1.03
RCC1-210ENST00000434290 RAPGEF6Q8TEU7 1601 aa21.44■■□□□ 1.02
RCC1-210ENST00000434290 GLI2P10070 1586 aa21.43■■□□□ 1.02
RCC1-210ENST00000434290 WDR7Q9Y4E6 1490 aa21.42■■□□□ 1.02
RCC1-210ENST00000434290 ATP10BO94823 1461 aa21.41■■□□□ 1.02
RCC1-210ENST00000434290 EPRSP07814 1512 aaKnown RBP21.4■■□□□ 1.02
RCC1-210ENST00000434290 FMN1Q68DA7 1419 aa21.4■■□□□ 1.02
RCC1-210ENST00000434290 NUP153P49790 1475 aaKnown RBP21.38■■□□□ 1.01
RCC1-210ENST00000434290 PCF11O94913 1555 aaKnown RBP21.36■■□□□ 1.01
RCC1-210ENST00000434290 ARID3CA6NKF2 412 aa21.35■■□□□ 1.01
RCC1-210ENST00000434290 VPS8Q8N3P4 1428 aa21.34■■□□□ 1.01
RCC1-210ENST00000434290 LRRIQ1Q96JM4 1722 aa21.33■■□□□ 1.01
RCC1-210ENST00000434290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.33■■□□□ 1.01
RCC1-210ENST00000434290 HNRNPUL2Q1KMD3 747 aaKnown RBP21.33■■□□□ 1.01
RCC1-210ENST00000434290 KCNH8Q96L42 1107 aa21.32■■□□□ 1
RCC1-210ENST00000434290 MAP3K4Q9Y6R4 1608 aa21.29■■□□□ 1
RCC1-210ENST00000434290 TSPOAP1O95153 1857 aa21.28■■□□□ 1
RCC1-210ENST00000434290 PLEKHD1A6NEE1 506 aa21.28■■□□□ 1
RCC1-210ENST00000434290 HECW1Q76N89 1606 aa21.26■□□□□ 0.99
RCC1-210ENST00000434290 TEX14Q8IWB6 1497 aa21.25■□□□□ 0.99
RCC1-210ENST00000434290 CD109Q6YHK3 1445 aa21.24■□□□□ 0.99
RCC1-210ENST00000434290 FYCO1Q9BQS8 1478 aa21.24■□□□□ 0.99
RCC1-210ENST00000434290 CFAP43Q8NDM7 1665 aa21.24■□□□□ 0.99
RCC1-210ENST00000434290 CASKIN1Q8WXD9 1431 aa21.23■□□□□ 0.99
RCC1-210ENST00000434290 ATP1B4Q9UN42 357 aaPredicted RBP21.23■□□□□ 0.99
RCC1-210ENST00000434290 PPRC1Q5VV67 1664 aaKnown RBP21.22■□□□□ 0.99
RCC1-210ENST00000434290 MAGI3Q5TCQ9 1506 aa21.21■□□□□ 0.99
RCC1-210ENST00000434290 CDK11AQ9UQ88 783 aaPredicted RBP21.21■□□□□ 0.99
RCC1-210ENST00000434290 CDK13Q14004 1512 aaKnown RBP21.18■□□□□ 0.98
RCC1-210ENST00000434290 KDM6BO15054 1643 aa21.18■□□□□ 0.98
RCC1-210ENST00000434290 ABCA9Q8IUA7 1624 aa21.18■□□□□ 0.98
RCC1-210ENST00000434290 TIAM1Q13009 1591 aa21.14■□□□□ 0.97
RCC1-210ENST00000434290 CCDC18Q5T9S5 1454 aa21.13■□□□□ 0.97
RCC1-210ENST00000434290 PHLDB1Q86UU1 1377 aa21.11■□□□□ 0.97
RCC1-210ENST00000434290 TROQ12816 1431 aaPredicted RBP21.08■□□□□ 0.97
RCC1-210ENST00000434290 MAP3K1Q13233 1512 aa21.08■□□□□ 0.96
RCC1-210ENST00000434290 COL17A1Q9UMD9 1497 aaPredicted RBP21.07■□□□□ 0.96
RCC1-210ENST00000434290 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.07■□□□□ 0.96
RCC1-210ENST00000434290 NEO1Q92859 1461 aa21.06■□□□□ 0.96
RCC1-210ENST00000434290 ARAP3Q8WWN8 1544 aa21.04■□□□□ 0.96
RCC1-210ENST00000434290 TTC37Q6PGP7 1564 aa21.01■□□□□ 0.95
RCC1-210ENST00000434290 PLCH2O75038 1416 aa21■□□□□ 0.95
RCC1-210ENST00000434290 KIF14Q15058 1648 aa21■□□□□ 0.95
RCC1-210ENST00000434290 FANCAO15360 1455 aa20.97■□□□□ 0.95
RCC1-210ENST00000434290 LRRC9Q6ZRR7 1453 aa20.97■□□□□ 0.95
RCC1-210ENST00000434290 EHBP1L1Q8N3D4 1523 aa20.96■□□□□ 0.95
RCC1-210ENST00000434290 CFAP74Q9C0B2 1584 aa20.96■□□□□ 0.95
RCC1-210ENST00000434290 AKNAQ7Z591 1439 aa20.95■□□□□ 0.94
RCC1-210ENST00000434290 KANK4Q5T7N3 995 aaPredicted RBP20.94■□□□□ 0.94
RCC1-210ENST00000434290 EFCAB2Q5VUJ9 269 aa20.94■□□□□ 0.94
RCC1-210ENST00000434290 ILDR1Q86SU0 546 aaPredicted RBP20.93■□□□□ 0.94
RCC1-210ENST00000434290 MYO5CQ9NQX4 1742 aa20.92■□□□□ 0.94
RCC1-210ENST00000434290 MTUS2Q5JR59 1369 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms