RNA–Protein interactions for RNA: ENST00000434278.5

LMBR1-208, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-208ENST00000434278 PRG4Q92954 1404 aaPredicted RBP34.66■■■■□ 3.14
LMBR1-208ENST00000434278 CARMIL1Q5VZK9 1371 aa34.66■■■■□ 3.14
LMBR1-208ENST00000434278 TRHP20396 242 aaPredicted RBP34.59■■■■□ 3.13
LMBR1-208ENST00000434278 KIAA0586Q9BVV6 1533 aa34.59■■■■□ 3.13
LMBR1-208ENST00000434278 RAPGEF2Q9Y4G8 1499 aa34.4■■■■□ 3.1
LMBR1-208ENST00000434278 IQGAP2Q13576 1575 aa34.33■■■■□ 3.09
LMBR1-208ENST00000434278 CARMIL2Q6F5E8 1435 aa34.21■■■■□ 3.07
LMBR1-208ENST00000434278 ADCY10Q96PN6 1610 aa34.2■■■■□ 3.07
LMBR1-208ENST00000434278 PRXQ9BXM0 1461 aa34.2■■■■□ 3.06
LMBR1-208ENST00000434278 PTPRGP23470 1445 aa34.18■■■■□ 3.06
LMBR1-208ENST00000434278 DISP1Q96F81 1524 aa34.16■■■■□ 3.06
LMBR1-208ENST00000434278 TNIKQ9UKE5 1360 aa34.16■■■■□ 3.06
LMBR1-208ENST00000434278 UGGT2Q9NYU1 1516 aa34.14■■■■□ 3.06
LMBR1-208ENST00000434278 TTBK1Q5TCY1 1321 aaPredicted RBP34.13■■■■□ 3.05
LMBR1-208ENST00000434278 NPM1P06748 294 aaKnown RBP eCLIP34.11■■■■□ 3.05
LMBR1-208ENST00000434278 CTTNBP2Q8WZ74 1663 aa34.09■■■■□ 3.05
LMBR1-208ENST00000434278 CSRNP3Q8WYN3 585 aa34.06■■■■□ 3.04
LMBR1-208ENST00000434278 MAPKBP1O60336 1514 aa34.04■■■■□ 3.04
LMBR1-208ENST00000434278 KIF13AQ9H1H9 1805 aa34.04■■■■□ 3.04
LMBR1-208ENST00000434278 KIAA0556O60303 1618 aa34.03■■■■□ 3.04
LMBR1-208ENST00000434278 EEA1Q15075 1411 aa33.96■■■■□ 3.03
LMBR1-208ENST00000434278 ABCC10Q5T3U5 1492 aa33.95■■■■□ 3.03
LMBR1-208ENST00000434278 UACAQ9BZF9 1416 aa33.94■■■■□ 3.02
LMBR1-208ENST00000434278 UHRF1BP1LA0JNW5 1464 aa33.93■■■■□ 3.02
LMBR1-208ENST00000434278 ABCC2Q92887 1545 aa33.93■■■■□ 3.02
LMBR1-208ENST00000434278 FAM69CQ0P6D2 419 aa33.91■■■■□ 3.02
LMBR1-208ENST00000434278 CHIC1Q5VXU3 224 aa33.9■■■■□ 3.02
LMBR1-208ENST00000434278 DIP2BQ9P265 1576 aa33.89■■■■□ 3.02
LMBR1-208ENST00000434278 GOLGA3Q08378 1498 aa33.88■■■■□ 3.01
LMBR1-208ENST00000434278 FAM9AQ8IZU1 332 aaPredicted RBP33.88■■■■□ 3.01
LMBR1-208ENST00000434278 KDM5BQ9UGL1 1544 aa33.78■■■■□ 3
LMBR1-208ENST00000434278 ASXL2Q76L83 1435 aa33.77■■■■□ 3
LMBR1-208ENST00000434278 PLB1Q6P1J6 1458 aa33.76■■■□□ 2.99
LMBR1-208ENST00000434278 ZCCHC11Q5TAX3 1644 aaKnown RBP33.71■■■□□ 2.99
LMBR1-208ENST00000434278 ABCA8O94911 1581 aa33.69■■■□□ 2.98
LMBR1-208ENST00000434278 P3H3Q8IVL6 736 aa33.69■■■□□ 2.98
LMBR1-208ENST00000434278 KIF21BO75037 1637 aa33.68■■■□□ 2.98
LMBR1-208ENST00000434278 SAMD9Q5K651 1589 aa33.66■■■□□ 2.98
LMBR1-208ENST00000434278 TSPOAP1O95153 1857 aa33.63■■■□□ 2.97
LMBR1-208ENST00000434278 GLI2P10070 1586 aa33.61■■■□□ 2.97
LMBR1-208ENST00000434278 EPRSP07814 1512 aaKnown RBP33.58■■■□□ 2.97
LMBR1-208ENST00000434278 RANGAP1P46060 587 aaPredicted RBP33.57■■■□□ 2.96
LMBR1-208ENST00000434278 WDR7Q9Y4E6 1490 aa33.51■■■□□ 2.96
LMBR1-208ENST00000434278 PPRC1Q5VV67 1664 aaKnown RBP33.49■■■□□ 2.95
LMBR1-208ENST00000434278 EHMT2Q96KQ7 1210 aa33.49■■■□□ 2.95
LMBR1-208ENST00000434278 KDM6BO15054 1643 aa33.46■■■□□ 2.95
LMBR1-208ENST00000434278 FHOD3Q2V2M9 1422 aa33.45■■■□□ 2.95
LMBR1-208ENST00000434278 MAP3K4Q9Y6R4 1608 aa33.45■■■□□ 2.95
LMBR1-208ENST00000434278 ARID3CA6NKF2 412 aa33.44■■■□□ 2.94
LMBR1-208ENST00000434278 ATP10BO94823 1461 aa33.42■■■□□ 2.94
LMBR1-208ENST00000434278 RAPGEF6Q8TEU7 1601 aa33.42■■■□□ 2.94
LMBR1-208ENST00000434278 UBTFP17480 764 aaKnown RBP33.41■■■□□ 2.94
LMBR1-208ENST00000434278 EFCAB5A4FU69 1503 aa33.39■■■□□ 2.94
LMBR1-208ENST00000434278 KCNH8Q96L42 1107 aa33.37■■■□□ 2.93
LMBR1-208ENST00000434278 NUP153P49790 1475 aaKnown RBP33.31■■■□□ 2.92
LMBR1-208ENST00000434278 TEX14Q8IWB6 1497 aa33.29■■■□□ 2.92
LMBR1-208ENST00000434278 CFAP43Q8NDM7 1665 aa33.27■■■□□ 2.92
LMBR1-208ENST00000434278 CD109Q6YHK3 1445 aa33.26■■■□□ 2.91
LMBR1-208ENST00000434278 COL17A1Q9UMD9 1497 aaPredicted RBP33.25■■■□□ 2.91
LMBR1-208ENST00000434278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.22■■■□□ 2.91
LMBR1-208ENST00000434278 HNRNPUL2Q1KMD3 747 aaKnown RBP33.22■■■□□ 2.91
LMBR1-208ENST00000434278 MAGI3Q5TCQ9 1506 aa33.22■■■□□ 2.91
LMBR1-208ENST00000434278 ARHGAP35Q9NRY4 1499 aa33.21■■■□□ 2.91
LMBR1-208ENST00000434278 AEBP2Q6ZN18 517 aaPredicted RBP33.14■■■□□ 2.9
LMBR1-208ENST00000434278 ABCA9Q8IUA7 1624 aa33.13■■■□□ 2.89
LMBR1-208ENST00000434278 FMN1Q68DA7 1419 aa33.09■■■□□ 2.89
LMBR1-208ENST00000434278 PLEKHD1A6NEE1 506 aa33.06■■■□□ 2.88
LMBR1-208ENST00000434278 CDK13Q14004 1512 aaKnown RBP33.04■■■□□ 2.88
LMBR1-208ENST00000434278 HECW1Q76N89 1606 aa32.99■■■□□ 2.87
LMBR1-208ENST00000434278 ATP1B4Q9UN42 357 aaPredicted RBP32.99■■■□□ 2.87
LMBR1-208ENST00000434278 ARAP3Q8WWN8 1544 aa32.94■■■□□ 2.86
LMBR1-208ENST00000434278 KDM4FA0A1W2PPD8 638 aa32.94■■■□□ 2.86
LMBR1-208ENST00000434278 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.91■■■□□ 2.861e-6■■■□□ 16.9
LMBR1-208ENST00000434278 NEO1Q92859 1461 aa32.89■■■□□ 2.86
LMBR1-208ENST00000434278 PHLDB1Q86UU1 1377 aa32.89■■■□□ 2.86
LMBR1-208ENST00000434278 TTC37Q6PGP7 1564 aa32.87■■■□□ 2.85
LMBR1-208ENST00000434278 LRRIQ1Q96JM4 1722 aa32.85■■■□□ 2.85
LMBR1-208ENST00000434278 CLIP1P30622 1438 aa32.85■■■□□ 2.85
LMBR1-208ENST00000434278 PCF11O94913 1555 aaKnown RBP32.81■■■□□ 2.84
LMBR1-208ENST00000434278 CASKIN1Q8WXD9 1431 aa32.81■■■□□ 2.84
LMBR1-208ENST00000434278 CDK11AQ9UQ88 783 aaPredicted RBP32.79■■■□□ 2.84
LMBR1-208ENST00000434278 RAPGEF3O95398 923 aa32.78■■■□□ 2.84
LMBR1-208ENST00000434278 ADGRL1O94910 1474 aa32.78■■■□□ 2.84
LMBR1-208ENST00000434278 FANCAO15360 1455 aa32.75■■■□□ 2.83
LMBR1-208ENST00000434278 AKNAQ7Z591 1439 aa32.74■■■□□ 2.83
LMBR1-208ENST00000434278 TROQ12816 1431 aaPredicted RBP32.73■■■□□ 2.83
LMBR1-208ENST00000434278 KIF14Q15058 1648 aa32.73■■■□□ 2.83
LMBR1-208ENST00000434278 FRMPD1Q5SYB0 1578 aa32.72■■■□□ 2.83
LMBR1-208ENST00000434278 CFAP74Q9C0B2 1584 aa32.7■■■□□ 2.83
LMBR1-208ENST00000434278 PLCH2O75038 1416 aa32.7■■■□□ 2.83
LMBR1-208ENST00000434278 CCDC18Q5T9S5 1454 aa32.69■■■□□ 2.82
LMBR1-208ENST00000434278 FYCO1Q9BQS8 1478 aa32.68■■■□□ 2.82
LMBR1-208ENST00000434278 DENND4BO75064 1496 aaPredicted RBP32.66■■■□□ 2.82
LMBR1-208ENST00000434278 RICTORQ6R327 1708 aa32.63■■■□□ 2.81
LMBR1-208ENST00000434278 MYO5CQ9NQX4 1742 aa32.63■■■□□ 2.81
LMBR1-208ENST00000434278 CEP162Q5TB80 1403 aa32.6■■■□□ 2.81
LMBR1-208ENST00000434278 EFCAB2Q5VUJ9 269 aa32.56■■■□□ 2.8
LMBR1-208ENST00000434278 SCAPERQ9BY12 1400 aa32.55■■■□□ 2.8
LMBR1-208ENST00000434278 LOC105371045A0A1W2PR82 267 aa32.54■■■□□ 2.8
LMBR1-208ENST00000434278 ARHGAP5Q13017 1502 aa32.51■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms