RNA–Protein interactions for RNA: ENST00000434245.3

LINC01138-201, Transcript of long intergenic non-protein coding RNA 1138, humanhuman

TSL 5

Gene LINC01138, Length 1,140 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01138-201ENST00000434245 CLASP1Q7Z460 1538 aa17.52■□□□□ 0.4
LINC01138-201ENST00000434245 PRXQ9BXM0 1461 aa17.52■□□□□ 0.4
LINC01138-201ENST00000434245 EEA1Q15075 1411 aa17.52■□□□□ 0.4
LINC01138-201ENST00000434245 RAPGEF2Q9Y4G8 1499 aa17.51■□□□□ 0.39
LINC01138-201ENST00000434245 PIAS4Q8N2W9 510 aaPredicted RBP17.48■□□□□ 0.39
LINC01138-201ENST00000434245 EHMT2Q96KQ7 1210 aa17.47■□□□□ 0.39
LINC01138-201ENST00000434245 JPH4Q96JJ6 628 aa17.42■□□□□ 0.38
LINC01138-201ENST00000434245 KIAA0586Q9BVV6 1533 aa17.42■□□□□ 0.38
LINC01138-201ENST00000434245 ARHGEF11O15085 1522 aa17.41■□□□□ 0.38
LINC01138-201ENST00000434245 ERCC6L2Q5T890 1561 aa17.39■□□□□ 0.37
LINC01138-201ENST00000434245 RIMBP3CA6NJZ7 1639 aa17.39■□□□□ 0.37
LINC01138-201ENST00000434245 RIMBP3BA6NNM3 1639 aa17.39■□□□□ 0.37
LINC01138-201ENST00000434245 RIMBP3Q9UFD9 1639 aa17.39■□□□□ 0.37
LINC01138-201ENST00000434245 SHROOM2Q13796 1616 aa17.36■□□□□ 0.37
LINC01138-201ENST00000434245 PRG4Q92954 1404 aaPredicted RBP17.35■□□□□ 0.37
LINC01138-201ENST00000434245 KIF21BO75037 1637 aa17.34■□□□□ 0.37
LINC01138-201ENST00000434245 ARAP1Q96P48 1450 aa17.32■□□□□ 0.36
LINC01138-201ENST00000434245 IQGAP2Q13576 1575 aa17.32■□□□□ 0.36
LINC01138-201ENST00000434245 CYB5RLQ6IPT4 315 aa17.31■□□□□ 0.36
LINC01138-201ENST00000434245 UBTFP17480 764 aaKnown RBP17.29■□□□□ 0.36
LINC01138-201ENST00000434245 RANGAP1P46060 587 aaPredicted RBP17.28■□□□□ 0.36
LINC01138-201ENST00000434245 GOLGA3Q08378 1498 aa17.28■□□□□ 0.36
LINC01138-201ENST00000434245 CTTNBP2Q8WZ74 1663 aa17.26■□□□□ 0.35
LINC01138-201ENST00000434245 DISP1Q96F81 1524 aa17.25■□□□□ 0.35
LINC01138-201ENST00000434245 UGGT2Q9NYU1 1516 aa17.25■□□□□ 0.35
LINC01138-201ENST00000434245 LOC105371045A0A1W2PR82 267 aa17.24■□□□□ 0.35
LINC01138-201ENST00000434245 TTBK1Q5TCY1 1321 aaPredicted RBP17.23■□□□□ 0.35
LINC01138-201ENST00000434245 P3H3Q8IVL6 736 aa17.21■□□□□ 0.35
LINC01138-201ENST00000434245 CARMIL2Q6F5E8 1435 aa17.19■□□□□ 0.34
LINC01138-201ENST00000434245 TNIKQ9UKE5 1360 aa17.16■□□□□ 0.34
LINC01138-201ENST00000434245 PTPRGP23470 1445 aa17.16■□□□□ 0.34
LINC01138-201ENST00000434245 KIAA0556O60303 1618 aa17.16■□□□□ 0.34
LINC01138-201ENST00000434245 SAMD9Q5K651 1589 aa17.11■□□□□ 0.33
LINC01138-201ENST00000434245 FHOD3Q2V2M9 1422 aa17.09■□□□□ 0.33
LINC01138-201ENST00000434245 PPP6R1Q9UPN7 881 aa17.08■□□□□ 0.32
LINC01138-201ENST00000434245 ARHGAP35Q9NRY4 1499 aa17.07■□□□□ 0.32
LINC01138-201ENST00000434245 PLB1Q6P1J6 1458 aa17.05■□□□□ 0.32
LINC01138-201ENST00000434245 ADCY10Q96PN6 1610 aa17.04■□□□□ 0.32
LINC01138-201ENST00000434245 UACAQ9BZF9 1416 aa17.03■□□□□ 0.32
LINC01138-201ENST00000434245 PLPPR3Q6T4P5 718 aa17.02■□□□□ 0.32
LINC01138-201ENST00000434245 EFCAB5A4FU69 1503 aa17.01■□□□□ 0.31
LINC01138-201ENST00000434245 CLIP1P30622 1438 aa17.01■□□□□ 0.31
LINC01138-201ENST00000434245 ADRA2BP18089 450 aa17■□□□□ 0.31
LINC01138-201ENST00000434245 CEP162Q5TB80 1403 aa16.99■□□□□ 0.31
LINC01138-201ENST00000434245 ARID3CA6NKF2 412 aa16.99■□□□□ 0.31
LINC01138-201ENST00000434245 ABCA8O94911 1581 aa16.98■□□□□ 0.31
LINC01138-201ENST00000434245 UHRF1BP1LA0JNW5 1464 aa16.98■□□□□ 0.31
LINC01138-201ENST00000434245 ABCC2Q92887 1545 aa16.96■□□□□ 0.31
LINC01138-201ENST00000434245 NPM1P06748 294 aaKnown RBP eCLIP16.94■□□□□ 0.3
LINC01138-201ENST00000434245 KDM5BQ9UGL1 1544 aa16.91■□□□□ 0.3
LINC01138-201ENST00000434245 RAPGEF6Q8TEU7 1601 aa16.9■□□□□ 0.3
LINC01138-201ENST00000434245 NUP153P49790 1475 aaKnown RBP16.9■□□□□ 0.3
LINC01138-201ENST00000434245 ATP10BO94823 1461 aa16.89■□□□□ 0.29
LINC01138-201ENST00000434245 ATP1B4Q9UN42 357 aaPredicted RBP16.89■□□□□ 0.29
LINC01138-201ENST00000434245 FMN1Q68DA7 1419 aa16.88■□□□□ 0.29
LINC01138-201ENST00000434245 TRHP20396 242 aaPredicted RBP16.87■□□□□ 0.29
LINC01138-201ENST00000434245 ZCCHC11Q5TAX3 1644 aaKnown RBP16.87■□□□□ 0.29
LINC01138-201ENST00000434245 ASXL2Q76L83 1435 aa16.86■□□□□ 0.29
LINC01138-201ENST00000434245 MAPKBP1O60336 1514 aa16.85■□□□□ 0.29
LINC01138-201ENST00000434245 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.83■□□□□ 0.28
LINC01138-201ENST00000434245 HNRNPUL2Q1KMD3 747 aaKnown RBP16.83■□□□□ 0.28
LINC01138-201ENST00000434245 CDK13Q14004 1512 aaKnown RBP16.82■□□□□ 0.28
LINC01138-201ENST00000434245 PCF11O94913 1555 aaKnown RBP16.81■□□□□ 0.28
LINC01138-201ENST00000434245 CASKIN1Q8WXD9 1431 aa16.81■□□□□ 0.28
LINC01138-201ENST00000434245 FAM69CQ0P6D2 419 aa16.8■□□□□ 0.28
LINC01138-201ENST00000434245 KCNH8Q96L42 1107 aa16.79■□□□□ 0.28
LINC01138-201ENST00000434245 ABCC10Q5T3U5 1492 aa16.79■□□□□ 0.28
LINC01138-201ENST00000434245 EPRSP07814 1512 aaKnown RBP16.78■□□□□ 0.28
LINC01138-201ENST00000434245 WDR7Q9Y4E6 1490 aa16.77■□□□□ 0.28
LINC01138-201ENST00000434245 HECW1Q76N89 1606 aa16.77■□□□□ 0.27
LINC01138-201ENST00000434245 LRRIQ1Q96JM4 1722 aa16.76■□□□□ 0.27
LINC01138-201ENST00000434245 FYCO1Q9BQS8 1478 aa16.75■□□□□ 0.27
LINC01138-201ENST00000434245 DIP2BQ9P265 1576 aa16.75■□□□□ 0.27
LINC01138-201ENST00000434245 VPS8Q8N3P4 1428 aa16.74■□□□□ 0.27
LINC01138-201ENST00000434245 KIF13AQ9H1H9 1805 aa16.73■□□□□ 0.27
LINC01138-201ENST00000434245 PLEKHD1A6NEE1 506 aa16.73■□□□□ 0.27
LINC01138-201ENST00000434245 MAGI3Q5TCQ9 1506 aa16.68■□□□□ 0.26
LINC01138-201ENST00000434245 CCDC18Q5T9S5 1454 aa16.67■□□□□ 0.26
LINC01138-201ENST00000434245 GLI2P10070 1586 aa16.66■□□□□ 0.26
LINC01138-201ENST00000434245 CDK11AQ9UQ88 783 aaPredicted RBP16.65■□□□□ 0.26
LINC01138-201ENST00000434245 TROQ12816 1431 aaPredicted RBP16.64■□□□□ 0.25
LINC01138-201ENST00000434245 TSPOAP1O95153 1857 aa16.63■□□□□ 0.25
LINC01138-201ENST00000434245 CD109Q6YHK3 1445 aa16.62■□□□□ 0.25
LINC01138-201ENST00000434245 KANK4Q5T7N3 995 aaPredicted RBP16.61■□□□□ 0.25
LINC01138-201ENST00000434245 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.6■□□□□ 0.25
LINC01138-201ENST00000434245 KIF14Q15058 1648 aa16.6■□□□□ 0.25
LINC01138-201ENST00000434245 MAP3K4Q9Y6R4 1608 aa16.6■□□□□ 0.25
LINC01138-201ENST00000434245 PPRC1Q5VV67 1664 aaKnown RBP16.59■□□□□ 0.25
LINC01138-201ENST00000434245 ABCA9Q8IUA7 1624 aa16.59■□□□□ 0.25
LINC01138-201ENST00000434245 MTUS2Q5JR59 1369 aa16.58■□□□□ 0.24
LINC01138-201ENST00000434245 TTC37Q6PGP7 1564 aa16.58■□□□□ 0.24
LINC01138-201ENST00000434245 TIAM1Q13009 1591 aa16.57■□□□□ 0.24
LINC01138-201ENST00000434245 CFAP43Q8NDM7 1665 aa16.55■□□□□ 0.24
LINC01138-201ENST00000434245 LRRC9Q6ZRR7 1453 aa16.53■□□□□ 0.24
LINC01138-201ENST00000434245 MAP3K1Q13233 1512 aa16.52■□□□□ 0.24
LINC01138-201ENST00000434245 COL17A1Q9UMD9 1497 aaPredicted RBP16.51■□□□□ 0.23
LINC01138-201ENST00000434245 APLP2Q06481 763 aa16.51■□□□□ 0.23
LINC01138-201ENST00000434245 PPARGC1BQ86YN6 1023 aaKnown RBP16.51■□□□□ 0.23
LINC01138-201ENST00000434245 EHBP1L1Q8N3D4 1523 aa16.5■□□□□ 0.23
LINC01138-201ENST00000434245 PLCH2O75038 1416 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms