RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 CARMIL1Q5VZK9 1371 aa22.88■■□□□ 1.25
EDEM1-202ENST00000434243 RUSC2Q8N2Y8 1516 aa22.86■■□□□ 1.25
EDEM1-202ENST00000434243 CUL7Q14999 1698 aa22.85■■□□□ 1.25
EDEM1-202ENST00000434243 KIAA0586Q9BVV6 1533 aa22.83■■□□□ 1.25
EDEM1-202ENST00000434243 NPM1P06748 294 aaKnown RBP eCLIP22.77■■□□□ 1.24
EDEM1-202ENST00000434243 TTBK1Q5TCY1 1321 aaPredicted RBP22.75■■□□□ 1.23
EDEM1-202ENST00000434243 RAPGEF2Q9Y4G8 1499 aa22.66■■□□□ 1.22
EDEM1-202ENST00000434243 PTPRGP23470 1445 aa22.65■■□□□ 1.22
EDEM1-202ENST00000434243 CARMIL2Q6F5E8 1435 aa22.65■■□□□ 1.22
EDEM1-202ENST00000434243 FAM69CQ0P6D2 419 aa22.62■■□□□ 1.21
EDEM1-202ENST00000434243 IQGAP2Q13576 1575 aa22.61■■□□□ 1.21
EDEM1-202ENST00000434243 TNIKQ9UKE5 1360 aa22.61■■□□□ 1.21
EDEM1-202ENST00000434243 ADCY10Q96PN6 1610 aa22.58■■□□□ 1.21
EDEM1-202ENST00000434243 ABCC10Q5T3U5 1492 aa22.53■■□□□ 1.2
EDEM1-202ENST00000434243 MAPKBP1O60336 1514 aa22.52■■□□□ 1.19
EDEM1-202ENST00000434243 DISP1Q96F81 1524 aa22.5■■□□□ 1.19
EDEM1-202ENST00000434243 KIF13AQ9H1H9 1805 aa22.47■■□□□ 1.19
EDEM1-202ENST00000434243 UGGT2Q9NYU1 1516 aa22.47■■□□□ 1.19
EDEM1-202ENST00000434243 UACAQ9BZF9 1416 aa22.46■■□□□ 1.19
EDEM1-202ENST00000434243 ABCC2Q92887 1545 aa22.44■■□□□ 1.18
EDEM1-202ENST00000434243 PRXQ9BXM0 1461 aa22.43■■□□□ 1.18
EDEM1-202ENST00000434243 DIP2BQ9P265 1576 aa22.42■■□□□ 1.18
EDEM1-202ENST00000434243 CSRNP3Q8WYN3 585 aa22.42■■□□□ 1.18
EDEM1-202ENST00000434243 AEBP2Q6ZN18 517 aaPredicted RBP22.41■■□□□ 1.18
EDEM1-202ENST00000434243 UHRF1BP1LA0JNW5 1464 aa22.4■■□□□ 1.18
EDEM1-202ENST00000434243 KIAA0556O60303 1618 aa22.39■■□□□ 1.18
EDEM1-202ENST00000434243 ASXL2Q76L83 1435 aa22.38■■□□□ 1.17
EDEM1-202ENST00000434243 GOLGA3Q08378 1498 aa22.35■■□□□ 1.17
EDEM1-202ENST00000434243 PLB1Q6P1J6 1458 aa22.35■■□□□ 1.17
EDEM1-202ENST00000434243 FAM9AQ8IZU1 332 aaPredicted RBP22.34■■□□□ 1.17
EDEM1-202ENST00000434243 CTTNBP2Q8WZ74 1663 aa22.33■■□□□ 1.17
EDEM1-202ENST00000434243 P3H3Q8IVL6 736 aa22.31■■□□□ 1.16
EDEM1-202ENST00000434243 KDM5BQ9UGL1 1544 aa22.29■■□□□ 1.16
EDEM1-202ENST00000434243 EEA1Q15075 1411 aa22.27■■□□□ 1.16
EDEM1-202ENST00000434243 TSPOAP1O95153 1857 aa22.26■■□□□ 1.15
EDEM1-202ENST00000434243 RANGAP1P46060 587 aaPredicted RBP22.26■■□□□ 1.15
EDEM1-202ENST00000434243 EPRSP07814 1512 aaKnown RBP22.22■■□□□ 1.15
EDEM1-202ENST00000434243 KDM6BO15054 1643 aa22.22■■□□□ 1.15
EDEM1-202ENST00000434243 ZCCHC11Q5TAX3 1644 aaKnown RBP22.22■■□□□ 1.15
EDEM1-202ENST00000434243 GLI2P10070 1586 aa22.21■■□□□ 1.15
EDEM1-202ENST00000434243 ARID3CA6NKF2 412 aa22.21■■□□□ 1.15
EDEM1-202ENST00000434243 KCNH8Q96L42 1107 aa22.2■■□□□ 1.14
EDEM1-202ENST00000434243 ABCA8O94911 1581 aa22.17■■□□□ 1.14
EDEM1-202ENST00000434243 WDR7Q9Y4E6 1490 aa22.17■■□□□ 1.14
EDEM1-202ENST00000434243 CHIC1Q5VXU3 224 aa22.15■■□□□ 1.14
EDEM1-202ENST00000434243 EHMT2Q96KQ7 1210 aa22.15■■□□□ 1.14
EDEM1-202ENST00000434243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.11■■□□□ 1.13
EDEM1-202ENST00000434243 HNRNPUL2Q1KMD3 747 aaKnown RBP22.11■■□□□ 1.13
EDEM1-202ENST00000434243 TEX14Q8IWB6 1497 aa22.09■■□□□ 1.13
EDEM1-202ENST00000434243 PPRC1Q5VV67 1664 aaKnown RBP22.07■■□□□ 1.12
EDEM1-202ENST00000434243 MAP3K4Q9Y6R4 1608 aa22.07■■□□□ 1.12
EDEM1-202ENST00000434243 CD109Q6YHK3 1445 aa22.06■■□□□ 1.12
EDEM1-202ENST00000434243 UBTFP17480 764 aaKnown RBP22.06■■□□□ 1.12
EDEM1-202ENST00000434243 SAMD9Q5K651 1589 aa22.06■■□□□ 1.12
EDEM1-202ENST00000434243 ATP10BO94823 1461 aa22.05■■□□□ 1.12
EDEM1-202ENST00000434243 FHOD3Q2V2M9 1422 aa22.05■■□□□ 1.12
EDEM1-202ENST00000434243 COL17A1Q9UMD9 1497 aaPredicted RBP22.03■■□□□ 1.12
EDEM1-202ENST00000434243 KIF21BO75037 1637 aa22.01■■□□□ 1.11
EDEM1-202ENST00000434243 KDM4FA0A1W2PPD8 638 aa22■■□□□ 1.11
EDEM1-202ENST00000434243 RAPGEF6Q8TEU7 1601 aa21.98■■□□□ 1.11
EDEM1-202ENST00000434243 MAGI3Q5TCQ9 1506 aa21.97■■□□□ 1.11
EDEM1-202ENST00000434243 CFAP43Q8NDM7 1665 aa21.94■■□□□ 1.1
EDEM1-202ENST00000434243 NUP153P49790 1475 aaKnown RBP21.92■■□□□ 1.1
EDEM1-202ENST00000434243 PLEKHD1A6NEE1 506 aa21.92■■□□□ 1.1
EDEM1-202ENST00000434243 EFCAB5A4FU69 1503 aa21.91■■□□□ 1.1
EDEM1-202ENST00000434243 ATP1B4Q9UN42 357 aaPredicted RBP21.9■■□□□ 1.1
EDEM1-202ENST00000434243 ADGRL1O94910 1474 aa21.83■■□□□ 1.08
EDEM1-202ENST00000434243 ABCA9Q8IUA7 1624 aa21.82■■□□□ 1.08
EDEM1-202ENST00000434243 PHLDB1Q86UU1 1377 aa21.8■■□□□ 1.08
EDEM1-202ENST00000434243 FMN1Q68DA7 1419 aa21.79■■□□□ 1.08
EDEM1-202ENST00000434243 ARHGAP35Q9NRY4 1499 aa21.78■■□□□ 1.08
EDEM1-202ENST00000434243 RAPGEF3O95398 923 aa21.78■■□□□ 1.08
EDEM1-202ENST00000434243 ARAP3Q8WWN8 1544 aa21.78■■□□□ 1.08
EDEM1-202ENST00000434243 CDK13Q14004 1512 aaKnown RBP21.75■■□□□ 1.07
EDEM1-202ENST00000434243 NEO1Q92859 1461 aa21.75■■□□□ 1.07
EDEM1-202ENST00000434243 CDK11AQ9UQ88 783 aaPredicted RBP21.72■■□□□ 1.07
EDEM1-202ENST00000434243 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.69■■□□□ 1.065e-11■■■■■ 71.6
EDEM1-202ENST00000434243 HECW1Q76N89 1606 aa21.68■■□□□ 1.06
EDEM1-202ENST00000434243 FANCAO15360 1455 aa21.66■■□□□ 1.06
EDEM1-202ENST00000434243 AKNAQ7Z591 1439 aa21.66■■□□□ 1.06
EDEM1-202ENST00000434243 ARID4BQ4LE39 1312 aaPredicted RBP21.64■■□□□ 1.05
EDEM1-202ENST00000434243 DENND4BO75064 1496 aaPredicted RBP21.64■■□□□ 1.05
EDEM1-202ENST00000434243 TTC37Q6PGP7 1564 aa21.62■■□□□ 1.05
EDEM1-202ENST00000434243 PLCH2O75038 1416 aa21.59■■□□□ 1.05
EDEM1-202ENST00000434243 CLIP1P30622 1438 aa21.58■■□□□ 1.05
EDEM1-202ENST00000434243 EFCAB2Q5VUJ9 269 aa21.58■■□□□ 1.05
EDEM1-202ENST00000434243 CFAP74Q9C0B2 1584 aa21.57■■□□□ 1.04
EDEM1-202ENST00000434243 TROQ12816 1431 aaPredicted RBP21.57■■□□□ 1.04
EDEM1-202ENST00000434243 FRMPD1Q5SYB0 1578 aa21.57■■□□□ 1.04
EDEM1-202ENST00000434243 CASKIN1Q8WXD9 1431 aa21.55■■□□□ 1.04
EDEM1-202ENST00000434243 SCAPERQ9BY12 1400 aa21.55■■□□□ 1.04
EDEM1-202ENST00000434243 KIF14Q15058 1648 aa21.51■■□□□ 1.03
EDEM1-202ENST00000434243 PCF11O94913 1555 aaKnown RBP21.5■■□□□ 1.03
EDEM1-202ENST00000434243 CCDC18Q5T9S5 1454 aa21.5■■□□□ 1.03
EDEM1-202ENST00000434243 MYT1LQ9UL68 1186 aa21.48■■□□□ 1.03
EDEM1-202ENST00000434243 RICTORQ6R327 1708 aa21.48■■□□□ 1.03
EDEM1-202ENST00000434243 ARHGAP5Q13017 1502 aa21.47■■□□□ 1.03
EDEM1-202ENST00000434243 POGZQ7Z3K3 1410 aa21.46■■□□□ 1.03
EDEM1-202ENST00000434243 YEATS2Q9ULM3 1422 aa21.46■■□□□ 1.03
EDEM1-202ENST00000434243 ARHGEF40Q8TER5 1519 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms