RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 IGF1RP08069 1367 aa25.86■■□□□ 1.73
RPUSD3-208ENST00000433972 CUL7Q14999 1698 aa25.84■■□□□ 1.73
RPUSD3-208ENST00000433972 KIAA0586Q9BVV6 1533 aa25.82■■□□□ 1.72
RPUSD3-208ENST00000433972 NPM1P06748 294 aaKnown RBP eCLIP25.77■■□□□ 1.72
RPUSD3-208ENST00000433972 CARMIL1Q5VZK9 1371 aa25.72■■□□□ 1.71
RPUSD3-208ENST00000433972 MAPKBP1O60336 1514 aa25.63■■□□□ 1.69
RPUSD3-208ENST00000433972 CARMIL2Q6F5E8 1435 aa25.63■■□□□ 1.69
RPUSD3-208ENST00000433972 ABCC10Q5T3U5 1492 aa25.6■■□□□ 1.69
RPUSD3-208ENST00000433972 AEBP2Q6ZN18 517 aaPredicted RBP25.59■■□□□ 1.69
RPUSD3-208ENST00000433972 PTPRGP23470 1445 aa25.58■■□□□ 1.69
RPUSD3-208ENST00000433972 FAM69CQ0P6D2 419 aa25.58■■□□□ 1.69
RPUSD3-208ENST00000433972 ADCY10Q96PN6 1610 aa25.58■■□□□ 1.69
RPUSD3-208ENST00000433972 TNIKQ9UKE5 1360 aa25.55■■□□□ 1.68
RPUSD3-208ENST00000433972 KIF13AQ9H1H9 1805 aa25.54■■□□□ 1.68
RPUSD3-208ENST00000433972 IQGAP2Q13576 1575 aa25.54■■□□□ 1.68
RPUSD3-208ENST00000433972 RAPGEF2Q9Y4G8 1499 aa25.51■■□□□ 1.67
RPUSD3-208ENST00000433972 DIP2BQ9P265 1576 aa25.48■■□□□ 1.67
RPUSD3-208ENST00000433972 TTBK1Q5TCY1 1321 aaPredicted RBP25.43■■□□□ 1.66
RPUSD3-208ENST00000433972 ABCC2Q92887 1545 aa25.42■■□□□ 1.66
RPUSD3-208ENST00000433972 UHRF1BP1LA0JNW5 1464 aa25.4■■□□□ 1.66
RPUSD3-208ENST00000433972 UGGT2Q9NYU1 1516 aa25.39■■□□□ 1.66
RPUSD3-208ENST00000433972 DISP1Q96F81 1524 aa25.38■■□□□ 1.65
RPUSD3-208ENST00000433972 UACAQ9BZF9 1416 aa25.37■■□□□ 1.65
RPUSD3-208ENST00000433972 PLB1Q6P1J6 1458 aa25.37■■□□□ 1.65
RPUSD3-208ENST00000433972 ASXL2Q76L83 1435 aa25.31■■□□□ 1.64
RPUSD3-208ENST00000433972 KDM6BO15054 1643 aa25.29■■□□□ 1.64
RPUSD3-208ENST00000433972 KIAA0556O60303 1618 aa25.29■■□□□ 1.64
RPUSD3-208ENST00000433972 GOLGA3Q08378 1498 aa25.27■■□□□ 1.64
RPUSD3-208ENST00000433972 KDM5BQ9UGL1 1544 aa25.26■■□□□ 1.63
RPUSD3-208ENST00000433972 GLI2P10070 1586 aa25.25■■□□□ 1.63
RPUSD3-208ENST00000433972 PRXQ9BXM0 1461 aa25.22■■□□□ 1.63
RPUSD3-208ENST00000433972 CTTNBP2Q8WZ74 1663 aa25.2■■□□□ 1.63
RPUSD3-208ENST00000433972 FAM9AQ8IZU1 332 aaPredicted RBP25.19■■□□□ 1.62
RPUSD3-208ENST00000433972 TSPOAP1O95153 1857 aa25.19■■□□□ 1.62
RPUSD3-208ENST00000433972 EPRSP07814 1512 aaKnown RBP25.16■■□□□ 1.62
RPUSD3-208ENST00000433972 ZCCHC11Q5TAX3 1644 aaKnown RBP25.14■■□□□ 1.61
RPUSD3-208ENST00000433972 TEX14Q8IWB6 1497 aa25.13■■□□□ 1.61
RPUSD3-208ENST00000433972 WDR7Q9Y4E6 1490 aa25.1■■□□□ 1.61
RPUSD3-208ENST00000433972 MAP3K4Q9Y6R4 1608 aa25.06■■□□□ 1.6
RPUSD3-208ENST00000433972 CSRNP3Q8WYN3 585 aa25.06■■□□□ 1.6
RPUSD3-208ENST00000433972 PPRC1Q5VV67 1664 aaKnown RBP25.05■■□□□ 1.6
RPUSD3-208ENST00000433972 ABCA8O94911 1581 aa25.05■■□□□ 1.6
RPUSD3-208ENST00000433972 EEA1Q15075 1411 aa25.04■■□□□ 1.6
RPUSD3-208ENST00000433972 KDM4FA0A1W2PPD8 638 aa24.97■■□□□ 1.59
RPUSD3-208ENST00000433972 CD109Q6YHK3 1445 aa24.95■■□□□ 1.58
RPUSD3-208ENST00000433972 MAGI3Q5TCQ9 1506 aa24.93■■□□□ 1.58
RPUSD3-208ENST00000433972 KCNH8Q96L42 1107 aa24.93■■□□□ 1.58
RPUSD3-208ENST00000433972 CFAP43Q8NDM7 1665 aa24.91■■□□□ 1.58
RPUSD3-208ENST00000433972 COL17A1Q9UMD9 1497 aaPredicted RBP24.91■■□□□ 1.58
RPUSD3-208ENST00000433972 P3H3Q8IVL6 736 aa24.9■■□□□ 1.58
RPUSD3-208ENST00000433972 SAMD9Q5K651 1589 aa24.88■■□□□ 1.57
RPUSD3-208ENST00000433972 ATP10BO94823 1461 aa24.85■■□□□ 1.57
RPUSD3-208ENST00000433972 ADGRL1O94910 1474 aa24.82■■□□□ 1.56
RPUSD3-208ENST00000433972 ARID3CA6NKF2 412 aa24.8■■□□□ 1.56
RPUSD3-208ENST00000433972 RAPGEF6Q8TEU7 1601 aa24.79■■□□□ 1.56
RPUSD3-208ENST00000433972 PHLDB1Q86UU1 1377 aa24.79■■□□□ 1.56
RPUSD3-208ENST00000433972 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.77■■□□□ 1.56
RPUSD3-208ENST00000433972 HNRNPUL2Q1KMD3 747 aaKnown RBP24.77■■□□□ 1.56
RPUSD3-208ENST00000433972 KIF21BO75037 1637 aa24.73■■□□□ 1.55
RPUSD3-208ENST00000433972 EFCAB5A4FU69 1503 aa24.73■■□□□ 1.55
RPUSD3-208ENST00000433972 RANGAP1P46060 587 aaPredicted RBP24.73■■□□□ 1.55
RPUSD3-208ENST00000433972 ABCA9Q8IUA7 1624 aa24.72■■□□□ 1.55
RPUSD3-208ENST00000433972 ARAP3Q8WWN8 1544 aa24.72■■□□□ 1.55
RPUSD3-208ENST00000433972 FHOD3Q2V2M9 1422 aa24.72■■□□□ 1.55
RPUSD3-208ENST00000433972 NUP153P49790 1475 aaKnown RBP24.7■■□□□ 1.54
RPUSD3-208ENST00000433972 NEO1Q92859 1461 aa24.67■■□□□ 1.54
RPUSD3-208ENST00000433972 PLEKHD1A6NEE1 506 aa24.66■■□□□ 1.54
RPUSD3-208ENST00000433972 UBTFP17480 764 aaKnown RBP24.59■■□□□ 1.53
RPUSD3-208ENST00000433972 FMN1Q68DA7 1419 aa24.54■■□□□ 1.52
RPUSD3-208ENST00000433972 CHIC1Q5VXU3 224 aa24.54■■□□□ 1.52
RPUSD3-208ENST00000433972 RAPGEF3O95398 923 aa24.53■■□□□ 1.52
RPUSD3-208ENST00000433972 CFAP74Q9C0B2 1584 aa24.5■■□□□ 1.51
RPUSD3-208ENST00000433972 FANCAO15360 1455 aa24.48■■□□□ 1.51
RPUSD3-208ENST00000433972 DENND4BO75064 1496 aaPredicted RBP24.48■■□□□ 1.51
RPUSD3-208ENST00000433972 CDK11AQ9UQ88 783 aaPredicted RBP24.47■■□□□ 1.51
RPUSD3-208ENST00000433972 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.46■■□□□ 1.51
RPUSD3-208ENST00000433972 AKNAQ7Z591 1439 aa24.46■■□□□ 1.51
RPUSD3-208ENST00000433972 HECW2Q9P2P5 1572 aa24.46■■□□□ 1.51
RPUSD3-208ENST00000433972 EHMT2Q96KQ7 1210 aa24.45■■□□□ 1.5
RPUSD3-208ENST00000433972 HECW1Q76N89 1606 aa24.44■■□□□ 1.5
RPUSD3-208ENST00000433972 FRMPD1Q5SYB0 1578 aa24.43■■□□□ 1.5
RPUSD3-208ENST00000433972 ATP1B4Q9UN42 357 aaPredicted RBP24.43■■□□□ 1.5
RPUSD3-208ENST00000433972 CDK13Q14004 1512 aaKnown RBP24.43■■□□□ 1.5
RPUSD3-208ENST00000433972 ARHGAP35Q9NRY4 1499 aa24.42■■□□□ 1.5
RPUSD3-208ENST00000433972 ARID4BQ4LE39 1312 aaPredicted RBP24.41■■□□□ 1.5
RPUSD3-208ENST00000433972 TTC37Q6PGP7 1564 aa24.39■■□□□ 1.5
RPUSD3-208ENST00000433972 ARHGEF40Q8TER5 1519 aa24.38■■□□□ 1.49
RPUSD3-208ENST00000433972 PLCH2O75038 1416 aa24.37■■□□□ 1.49
RPUSD3-208ENST00000433972 MAGI2Q86UL8 1455 aa24.36■■□□□ 1.49
RPUSD3-208ENST00000433972 PTPRMP28827 1452 aa24.35■■□□□ 1.49
RPUSD3-208ENST00000433972 ADAMTSL3P82987 1691 aa24.34■■□□□ 1.49
RPUSD3-208ENST00000433972 RICTORQ6R327 1708 aa24.34■■□□□ 1.49
RPUSD3-208ENST00000433972 ZMYM4Q5VZL5 1548 aa24.34■■□□□ 1.49
RPUSD3-208ENST00000433972 CLIP1P30622 1438 aa24.34■■□□□ 1.49
RPUSD3-208ENST00000433972 POGZQ7Z3K3 1410 aa24.34■■□□□ 1.49
RPUSD3-208ENST00000433972 EFCAB2Q5VUJ9 269 aa24.32■■□□□ 1.48
RPUSD3-208ENST00000433972 BCORL1Q5H9F3 1711 aa24.31■■□□□ 1.48
RPUSD3-208ENST00000433972 TROQ12816 1431 aaPredicted RBP24.3■■□□□ 1.48
RPUSD3-208ENST00000433972 ZFYVE16Q7Z3T8 1539 aa24.3■■□□□ 1.48
RPUSD3-208ENST00000433972 SCAPERQ9BY12 1400 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms