RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 EFCAB5A4FU69 1503 aa25.49■■□□□ 1.67
CTSD-204ENST00000433655 FHAD1B1AJZ9 1412 aa25.47■■□□□ 1.67
CTSD-204ENST00000433655 TARBP1Q13395 1621 aaKnown RBP25.46■■□□□ 1.67
CTSD-204ENST00000433655 TDRD9Q8NDG6 1382 aaKnown RBP25.45■■□□□ 1.66
CTSD-204ENST00000433655 GAPVD1Q14C86 1478 aa25.44■■□□□ 1.66
CTSD-204ENST00000433655 LRRC9Q6ZRR7 1453 aa25.44■■□□□ 1.66
CTSD-204ENST00000433655 CCNB3Q8WWL7 1395 aa25.44■■□□□ 1.66
CTSD-204ENST00000433655 FHOD3Q2V2M9 1422 aa25.43■■□□□ 1.66
CTSD-204ENST00000433655 P3H3Q8IVL6 736 aa25.37■■□□□ 1.65
CTSD-204ENST00000433655 DHX57Q6P158 1386 aaKnown RBP25.37■■□□□ 1.65
CTSD-204ENST00000433655 FYCO1Q9BQS8 1478 aa25.37■■□□□ 1.65
CTSD-204ENST00000433655 AQRO60306 1485 aaKnown RBP eCLIP25.36■■□□□ 1.651e-6■■■■■ 31.1
CTSD-204ENST00000433655 SAMD9Q5K651 1589 aa25.35■■□□□ 1.65
CTSD-204ENST00000433655 CASKIN1Q8WXD9 1431 aa25.33■■□□□ 1.65
CTSD-204ENST00000433655 PBRM1Q86U86 1689 aa25.32■■□□□ 1.64
CTSD-204ENST00000433655 DIEXFQ68CQ4 756 aaKnown RBP25.3■■□□□ 1.64
CTSD-204ENST00000433655 PHLDB1Q86UU1 1377 aa25.3■■□□□ 1.64
CTSD-204ENST00000433655 SNAPC4Q5SXM2 1469 aa25.29■■□□□ 1.64
CTSD-204ENST00000433655 CLSPNQ9HAW4 1339 aa25.28■■□□□ 1.64
CTSD-204ENST00000433655 MRC2Q9UBG0 1479 aa25.28■■□□□ 1.64
CTSD-204ENST00000433655 ZNF316A6NFI3 1004 aaPredicted RBP25.28■■□□□ 1.64
CTSD-204ENST00000433655 FMN1Q68DA7 1419 aa25.24■■□□□ 1.63
CTSD-204ENST00000433655 LRRIQ1Q96JM4 1722 aa25.24■■□□□ 1.63
CTSD-204ENST00000433655 ADAMTS12P58397 1594 aa25.2■■□□□ 1.63
CTSD-204ENST00000433655 ITGAEP38570 1179 aa25.16■■□□□ 1.62
CTSD-204ENST00000433655 ATP1B4Q9UN42 357 aaPredicted RBP25.15■■□□□ 1.62
CTSD-204ENST00000433655 WDR62O43379 1518 aa25.15■■□□□ 1.62
CTSD-204ENST00000433655 GRIN2BQ13224 1484 aa25.14■■□□□ 1.62
CTSD-204ENST00000433655 RAB3GAP2Q9H2M9 1393 aa25.13■■□□□ 1.61
CTSD-204ENST00000433655 THOC2Q8NI27 1593 aaKnown RBP25.12■■□□□ 1.61
CTSD-204ENST00000433655 IQGAP2Q13576 1575 aa25.08■■□□□ 1.6
CTSD-204ENST00000433655 IFT140Q96RY7 1462 aa25.07■■□□□ 1.6
CTSD-204ENST00000433655 MAPKBP1O60336 1514 aa25.07■■□□□ 1.6
CTSD-204ENST00000433655 SETD5Q9C0A6 1442 aa25.07■■□□□ 1.6
CTSD-204ENST00000433655 ZNF608Q9ULD9 1512 aaPredicted RBP25.07■■□□□ 1.6
CTSD-204ENST00000433655 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.06■■□□□ 1.63e-7■■■□□ 14.6
CTSD-204ENST00000433655 FAM50AQ14320 339 aaKnown RBP25.04■■□□□ 1.6
CTSD-204ENST00000433655 FGD6Q6ZV73 1430 aa25.01■■□□□ 1.59
CTSD-204ENST00000433655 EHBP1L1Q8N3D4 1523 aa24.98■■□□□ 1.59
CTSD-204ENST00000433655 MTUS2Q5JR59 1369 aa24.98■■□□□ 1.59
CTSD-204ENST00000433655 MAGI3Q5TCQ9 1506 aa24.97■■□□□ 1.59
CTSD-204ENST00000433655 SUPT6HQ7KZ85 1726 aaKnown RBP24.97■■□□□ 1.59
CTSD-204ENST00000433655 EIF4G3O43432 1585 aaKnown RBP24.97■■□□□ 1.59
CTSD-204ENST00000433655 NCOA2Q15596 1464 aa24.96■■□□□ 1.59
CTSD-204ENST00000433655 UGGT2Q9NYU1 1516 aa24.95■■□□□ 1.58
CTSD-204ENST00000433655 HECW1Q76N89 1606 aa24.95■■□□□ 1.58
CTSD-204ENST00000433655 ARHGEF11O15085 1522 aa24.94■■□□□ 1.58
CTSD-204ENST00000433655 SCAF1Q9H7N4 1312 aaKnown RBP24.93■■□□□ 1.58
CTSD-204ENST00000433655 CCDC18Q5T9S5 1454 aa24.93■■□□□ 1.58
CTSD-204ENST00000433655 MYOM3Q5VTT5 1437 aa24.9■■□□□ 1.58
CTSD-204ENST00000433655 PTPRKQ15262 1439 aa24.87■■□□□ 1.57
CTSD-204ENST00000433655 ACIN1Q9UKV3 1341 aaKnown RBP24.86■■□□□ 1.57
CTSD-204ENST00000433655 EPRSP07814 1512 aaKnown RBP24.86■■□□□ 1.57
CTSD-204ENST00000433655 ERCC6Q03468 1493 aa24.86■■□□□ 1.57
CTSD-204ENST00000433655 KIAA0586Q9BVV6 1533 aa24.85■■□□□ 1.57
CTSD-204ENST00000433655 GRIN2AQ12879 1464 aa24.85■■□□□ 1.57
CTSD-204ENST00000433655 NEUROD1Q13562 356 aa24.85■■□□□ 1.57
CTSD-204ENST00000433655 KIAA0556O60303 1618 aa24.84■■□□□ 1.57
CTSD-204ENST00000433655 PTPN23Q9H3S7 1636 aa24.84■■□□□ 1.57
CTSD-204ENST00000433655 MIER1Q8N108 512 aa24.84■■□□□ 1.57
CTSD-204ENST00000433655 DISP1Q96F81 1524 aa24.83■■□□□ 1.56
CTSD-204ENST00000433655 CDK13Q14004 1512 aaKnown RBP24.82■■□□□ 1.56
CTSD-204ENST00000433655 HFM1A2PYH4 1435 aa24.79■■□□□ 1.56
CTSD-204ENST00000433655 TCOF1Q13428 1488 aaKnown RBP24.77■■□□□ 1.56
CTSD-204ENST00000433655 MAGI1Q96QZ7 1491 aaPredicted RBP24.76■■□□□ 1.55
CTSD-204ENST00000433655 CEP170Q5SW79 1584 aa24.73■■□□□ 1.55
CTSD-204ENST00000433655 CENPBP07199 599 aaPredicted RBP24.73■■□□□ 1.55
CTSD-204ENST00000433655 NAIPQ13075 1403 aa24.72■■□□□ 1.55
CTSD-204ENST00000433655 SIN3AQ96ST3 1273 aa24.71■■□□□ 1.55
CTSD-204ENST00000433655 SYNJ2O15056 1496 aa24.7■■□□□ 1.54
CTSD-204ENST00000433655 RAPGEF6Q8TEU7 1601 aa24.7■■□□□ 1.54
CTSD-204ENST00000433655 NUP153P49790 1475 aaKnown RBP24.68■■□□□ 1.54
CTSD-204ENST00000433655 GCC2Q8IWJ2 1684 aa24.67■■□□□ 1.54
CTSD-204ENST00000433655 UACAQ9BZF9 1416 aa24.67■■□□□ 1.54
CTSD-204ENST00000433655 MIA2Q96PC5 1412 aa24.64■■□□□ 1.54
CTSD-204ENST00000433655 ARID3CA6NKF2 412 aa24.61■■□□□ 1.53
CTSD-204ENST00000433655 NUP160Q12769 1436 aa24.6■■□□□ 1.53
CTSD-204ENST00000433655 TIMELESSQ9UNS1 1208 aa24.6■■□□□ 1.53
CTSD-204ENST00000433655 AKNAQ7Z591 1439 aa24.58■■□□□ 1.53
CTSD-204ENST00000433655 YTHDC1Q96MU7 727 aaKnown RBP24.57■■□□□ 1.52
CTSD-204ENST00000433655 CHMP7Q8WUX9 453 aaPredicted RBP24.56■■□□□ 1.52
CTSD-204ENST00000433655 KDM6BO15054 1643 aa24.56■■□□□ 1.52
CTSD-204ENST00000433655 PLB1Q6P1J6 1458 aa24.51■■□□□ 1.51
CTSD-204ENST00000433655 DENND4BO75064 1496 aaPredicted RBP24.5■■□□□ 1.51
CTSD-204ENST00000433655 PPP1R15AO75807 674 aaPredicted RBP24.5■■□□□ 1.51
CTSD-204ENST00000433655 GTF3C3Q9Y5Q9 886 aa24.5■■□□□ 1.51
CTSD-204ENST00000433655 DNMT1P26358 1616 aaKnown RBP24.5■■□□□ 1.51
CTSD-204ENST00000433655 RRP7BPQ9NSQ0 103 aa24.49■■□□□ 1.51
CTSD-204ENST00000433655 CHIC2Q9UKJ5 165 aa24.48■■□□□ 1.51
CTSD-204ENST00000433655 ADCY10Q96PN6 1610 aa24.47■■□□□ 1.51
CTSD-204ENST00000433655 KDM5BQ9UGL1 1544 aa24.46■■□□□ 1.51
CTSD-204ENST00000433655 DAPK1P53355 1430 aa24.46■■□□□ 1.51
CTSD-204ENST00000433655 FBLN2P98095 1184 aa24.45■■□□□ 1.51
CTSD-204ENST00000433655 TROQ12816 1431 aaPredicted RBP24.45■■□□□ 1.5
CTSD-204ENST00000433655 PRG4Q92954 1404 aaPredicted RBP24.44■■□□□ 1.5
CTSD-204ENST00000433655 CARMIL2Q6F5E8 1435 aa24.44■■□□□ 1.5
CTSD-204ENST00000433655 JPH4Q96JJ6 628 aa24.43■■□□□ 1.5
CTSD-204ENST00000433655 KIF14Q15058 1648 aa24.43■■□□□ 1.5
CTSD-204ENST00000433655 ABCC5O15440 1437 aa24.42■■□□□ 1.5
CTSD-204ENST00000433655 TONSLQ96HA7 1378 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms