RNA–Protein interactions for RNA: ENST00000433627.9

LSM14A-201, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LSM14A, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-201ENST00000433627 FAM50AQ14320 339 aaKnown RBP20.36■□□□□ 0.85
LSM14A-201ENST00000433627 DIEXFQ68CQ4 756 aaKnown RBP20.34■□□□□ 0.85
LSM14A-201ENST00000433627 TIAM1Q13009 1591 aa20.34■□□□□ 0.85
LSM14A-201ENST00000433627 RRBP1Q9P2E9 1410 aaKnown RBP20.32■□□□□ 0.84
LSM14A-201ENST00000433627 PCF11O94913 1555 aaKnown RBP20.32■□□□□ 0.84
LSM14A-201ENST00000433627 WDR97A6NE52 1622 aa20.32■□□□□ 0.84
LSM14A-201ENST00000433627 AQRO60306 1485 aaKnown RBP eCLIP20.31■□□□□ 0.842e-7■■■■□ 21.1
LSM14A-201ENST00000433627 ABCA5Q8WWZ7 1642 aa20.3■□□□□ 0.84
LSM14A-201ENST00000433627 LRRC9Q6ZRR7 1453 aa20.29■□□□□ 0.84
LSM14A-201ENST00000433627 CTTNBP2Q8WZ74 1663 aa20.27■□□□□ 0.84
LSM14A-201ENST00000433627 ZNF316A6NFI3 1004 aaPredicted RBP20.27■□□□□ 0.84
LSM14A-201ENST00000433627 MRC2Q9UBG0 1479 aa20.27■□□□□ 0.83
LSM14A-201ENST00000433627 PHLDB1Q86UU1 1377 aa20.27■□□□□ 0.83
LSM14A-201ENST00000433627 EFCAB5A4FU69 1503 aa20.24■□□□□ 0.83
LSM14A-201ENST00000433627 DHX57Q6P158 1386 aaKnown RBP20.24■□□□□ 0.83
LSM14A-201ENST00000433627 TARBP1Q13395 1621 aaKnown RBP20.23■□□□□ 0.83
LSM14A-201ENST00000433627 ARID3CA6NKF2 412 aa20.21■□□□□ 0.83
LSM14A-201ENST00000433627 FMN1Q68DA7 1419 aa20.2■□□□□ 0.82
LSM14A-201ENST00000433627 CASKIN1Q8WXD9 1431 aa20.2■□□□□ 0.82
LSM14A-201ENST00000433627 MAP3K1Q13233 1512 aa20.2■□□□□ 0.82
LSM14A-201ENST00000433627 ERCC6Q03468 1493 aa20.2■□□□□ 0.82
LSM14A-201ENST00000433627 FYCO1Q9BQS8 1478 aa20.2■□□□□ 0.82
LSM14A-201ENST00000433627 MTUS2Q5JR59 1369 aa20.18■□□□□ 0.82
LSM14A-201ENST00000433627 ZNF608Q9ULD9 1512 aaPredicted RBP20.16■□□□□ 0.82
LSM14A-201ENST00000433627 CFAP43Q8NDM7 1665 aa20.14■□□□□ 0.82
LSM14A-201ENST00000433627 RAB3GAP2Q9H2M9 1393 aa20.14■□□□□ 0.81
LSM14A-201ENST00000433627 PBRM1Q86U86 1689 aa20.12■□□□□ 0.81
LSM14A-201ENST00000433627 FBLN2P98095 1184 aa20.11■□□□□ 0.81
LSM14A-201ENST00000433627 GRIN2BQ13224 1484 aa20.11■□□□□ 0.81
LSM14A-201ENST00000433627 SNAPC4Q5SXM2 1469 aa20.09■□□□□ 0.81
LSM14A-201ENST00000433627 IFT140Q96RY7 1462 aa20.08■□□□□ 0.8
LSM14A-201ENST00000433627 CLSPNQ9HAW4 1339 aa20.08■□□□□ 0.8
LSM14A-201ENST00000433627 SAMD9Q5K651 1589 aa20.06■□□□□ 0.8
LSM14A-201ENST00000433627 SETD5Q9C0A6 1442 aa20.06■□□□□ 0.8
LSM14A-201ENST00000433627 ADAMTS12P58397 1594 aa20.05■□□□□ 0.8
LSM14A-201ENST00000433627 NEUROD1Q13562 356 aa20.03■□□□□ 0.8
LSM14A-201ENST00000433627 WDR62O43379 1518 aa20.02■□□□□ 0.8
LSM14A-201ENST00000433627 IQGAP2Q13576 1575 aa20.02■□□□□ 0.8
LSM14A-201ENST00000433627 CHMP7Q8WUX9 453 aaPredicted RBP20.01■□□□□ 0.79
LSM14A-201ENST00000433627 FGD6Q6ZV73 1430 aa19.99■□□□□ 0.79
LSM14A-201ENST00000433627 YTHDC1Q96MU7 727 aaKnown RBP19.99■□□□□ 0.79
LSM14A-201ENST00000433627 NCOA2Q15596 1464 aa19.97■□□□□ 0.79
LSM14A-201ENST00000433627 SIN3AQ96ST3 1273 aa19.96■□□□□ 0.79
LSM14A-201ENST00000433627 MIER1Q8N108 512 aa19.95■□□□□ 0.78
LSM14A-201ENST00000433627 LRRIQ1Q96JM4 1722 aa19.95■□□□□ 0.78
LSM14A-201ENST00000433627 EIF4G3O43432 1585 aaKnown RBP19.94■□□□□ 0.78
LSM14A-201ENST00000433627 CHIC2Q9UKJ5 165 aa19.93■□□□□ 0.78
LSM14A-201ENST00000433627 CDK13Q14004 1512 aaKnown RBP19.91■□□□□ 0.78
LSM14A-201ENST00000433627 MYOM3Q5VTT5 1437 aa19.9■□□□□ 0.78
LSM14A-201ENST00000433627 GRIN2AQ12879 1464 aa19.89■□□□□ 0.78
LSM14A-201ENST00000433627 MAPKBP1O60336 1514 aa19.88■□□□□ 0.77
LSM14A-201ENST00000433627 EHBP1L1Q8N3D4 1523 aa19.88■□□□□ 0.77
LSM14A-201ENST00000433627 MAGI3Q5TCQ9 1506 aa19.88■□□□□ 0.77
LSM14A-201ENST00000433627 SCAF1Q9H7N4 1312 aaKnown RBP19.88■□□□□ 0.77
LSM14A-201ENST00000433627 CENPBP07199 599 aaPredicted RBP19.88■□□□□ 0.77
LSM14A-201ENST00000433627 RRP7BPQ9NSQ0 103 aa19.88■□□□□ 0.77
LSM14A-201ENST00000433627 SUPT6HQ7KZ85 1726 aaKnown RBP19.87■□□□□ 0.77
LSM14A-201ENST00000433627 CCDC18Q5T9S5 1454 aa19.87■□□□□ 0.77
LSM14A-201ENST00000433627 HECW1Q76N89 1606 aa19.87■□□□□ 0.77
LSM14A-201ENST00000433627 EPRSP07814 1512 aaKnown RBP19.87■□□□□ 0.77
LSM14A-201ENST00000433627 KIAA0586Q9BVV6 1533 aa19.87■□□□□ 0.77
LSM14A-201ENST00000433627 THOC2Q8NI27 1593 aaKnown RBP19.86■□□□□ 0.77
LSM14A-201ENST00000433627 PTPRKQ15262 1439 aa19.86■□□□□ 0.77
LSM14A-201ENST00000433627 ACIN1Q9UKV3 1341 aaKnown RBP19.85■□□□□ 0.77
LSM14A-201ENST00000433627 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.84■□□□□ 0.77
LSM14A-201ENST00000433627 UGGT2Q9NYU1 1516 aa19.83■□□□□ 0.77
LSM14A-201ENST00000433627 DISP1Q96F81 1524 aa19.8■□□□□ 0.76
LSM14A-201ENST00000433627 MAGI1Q96QZ7 1491 aaPredicted RBP19.79■□□□□ 0.76
LSM14A-201ENST00000433627 TRIM52Q96A61 297 aa19.79■□□□□ 0.76
LSM14A-201ENST00000433627 KIAA0556O60303 1618 aa19.79■□□□□ 0.76
LSM14A-201ENST00000433627 SYNJ2O15056 1496 aa19.78■□□□□ 0.76
LSM14A-201ENST00000433627 PTPN23Q9H3S7 1636 aa19.78■□□□□ 0.76
LSM14A-201ENST00000433627 JPH4Q96JJ6 628 aa19.77■□□□□ 0.76
LSM14A-201ENST00000433627 CDK11AQ9UQ88 783 aaPredicted RBP19.76■□□□□ 0.75
LSM14A-201ENST00000433627 HFM1A2PYH4 1435 aa19.74■□□□□ 0.75
LSM14A-201ENST00000433627 CEP170Q5SW79 1584 aa19.74■□□□□ 0.75
LSM14A-201ENST00000433627 NAIPQ13075 1403 aa19.73■□□□□ 0.75
LSM14A-201ENST00000433627 HIRIP3Q9BW71 556 aaPredicted RBP19.73■□□□□ 0.75
LSM14A-201ENST00000433627 ZNF777Q9ULD5 760 aaPredicted RBP19.72■□□□□ 0.75
LSM14A-201ENST00000433627 ZNF644Q9H582 1327 aaPredicted RBP19.72■□□□□ 0.75
LSM14A-201ENST00000433627 NUP153P49790 1475 aaKnown RBP19.72■□□□□ 0.75
LSM14A-201ENST00000433627 PLB1Q6P1J6 1458 aa19.71■□□□□ 0.75
LSM14A-201ENST00000433627 ARHGEF11O15085 1522 aa19.7■□□□□ 0.74
LSM14A-201ENST00000433627 TONSLQ96HA7 1378 aa19.7■□□□□ 0.74
LSM14A-201ENST00000433627 CARMIL2Q6F5E8 1435 aa19.69■□□□□ 0.74
LSM14A-201ENST00000433627 RAPGEF6Q8TEU7 1601 aa19.68■□□□□ 0.74
LSM14A-201ENST00000433627 PRG4Q92954 1404 aaPredicted RBP19.67■□□□□ 0.74
LSM14A-201ENST00000433627 UACAQ9BZF9 1416 aa19.67■□□□□ 0.74
LSM14A-201ENST00000433627 GTF3C3Q9Y5Q9 886 aa19.67■□□□□ 0.74
LSM14A-201ENST00000433627 CFDP1Q9UEE9 299 aaPredicted RBP19.64■□□□□ 0.73
LSM14A-201ENST00000433627 PPP1R15AO75807 674 aaPredicted RBP19.63■□□□□ 0.73
LSM14A-201ENST00000433627 MIA2Q96PC5 1412 aa19.63■□□□□ 0.73
LSM14A-201ENST00000433627 TCOF1Q13428 1488 aaKnown RBP19.63■□□□□ 0.73
LSM14A-201ENST00000433627 NUP160Q12769 1436 aa19.62■□□□□ 0.73
LSM14A-201ENST00000433627 FOXD1Q16676 465 aa19.61■□□□□ 0.73
LSM14A-201ENST00000433627 DDX10Q13206 875 aaKnown RBP19.61■□□□□ 0.73
LSM14A-201ENST00000433627 TIMELESSQ9UNS1 1208 aa19.59■□□□□ 0.73
LSM14A-201ENST00000433627 PLEKHD1A6NEE1 506 aa19.58■□□□□ 0.73
LSM14A-201ENST00000433627 TROQ12816 1431 aaPredicted RBP19.58■□□□□ 0.72
LSM14A-201ENST00000433627 DAPK1P53355 1430 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms