RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 RAPGEF2Q9Y4G8 1499 aa32■■■□□ 2.71
RPUSD3-207ENST00000433555 KIAA0586Q9BVV6 1533 aa31.97■■■□□ 2.71
RPUSD3-207ENST00000433555 PRXQ9BXM0 1461 aa31.94■■■□□ 2.7
RPUSD3-207ENST00000433555 CTTNBP2Q8WZ74 1663 aa31.89■■■□□ 2.7
RPUSD3-207ENST00000433555 CYB5RLQ6IPT4 315 aa31.89■■■□□ 2.7
RPUSD3-207ENST00000433555 PRG4Q92954 1404 aaPredicted RBP31.89■■■□□ 2.7
RPUSD3-207ENST00000433555 IQGAP2Q13576 1575 aa31.89■■■□□ 2.7
RPUSD3-207ENST00000433555 EEA1Q15075 1411 aa31.85■■■□□ 2.69
RPUSD3-207ENST00000433555 JPH4Q96JJ6 628 aa31.83■■■□□ 2.69
RPUSD3-207ENST00000433555 CSRNP3Q8WYN3 585 aa31.75■■■□□ 2.67
RPUSD3-207ENST00000433555 FAM9AQ8IZU1 332 aaPredicted RBP31.71■■■□□ 2.67
RPUSD3-207ENST00000433555 KIF21BO75037 1637 aa31.7■■■□□ 2.66
RPUSD3-207ENST00000433555 UGGT2Q9NYU1 1516 aa31.7■■■□□ 2.66
RPUSD3-207ENST00000433555 DISP1Q96F81 1524 aa31.66■■■□□ 2.66
RPUSD3-207ENST00000433555 KIAA0556O60303 1618 aa31.64■■■□□ 2.65
RPUSD3-207ENST00000433555 ADCY10Q96PN6 1610 aa31.56■■■□□ 2.64
RPUSD3-207ENST00000433555 CARMIL2Q6F5E8 1435 aa31.55■■■□□ 2.64
RPUSD3-207ENST00000433555 TNIKQ9UKE5 1360 aa31.49■■■□□ 2.63
RPUSD3-207ENST00000433555 SAMD9Q5K651 1589 aa31.44■■■□□ 2.62
RPUSD3-207ENST00000433555 PTPRGP23470 1445 aa31.44■■■□□ 2.62
RPUSD3-207ENST00000433555 GOLGA3Q08378 1498 aa31.41■■■□□ 2.62
RPUSD3-207ENST00000433555 TTBK1Q5TCY1 1321 aaPredicted RBP31.39■■■□□ 2.62
RPUSD3-207ENST00000433555 EHMT2Q96KQ7 1210 aa31.33■■■□□ 2.61
RPUSD3-207ENST00000433555 ABCC2Q92887 1545 aa31.32■■■□□ 2.6
RPUSD3-207ENST00000433555 UHRF1BP1LA0JNW5 1464 aa31.29■■■□□ 2.6
RPUSD3-207ENST00000433555 UACAQ9BZF9 1416 aa31.28■■■□□ 2.6
RPUSD3-207ENST00000433555 MAPKBP1O60336 1514 aa31.28■■■□□ 2.6
RPUSD3-207ENST00000433555 ABCA8O94911 1581 aa31.26■■■□□ 2.6
RPUSD3-207ENST00000433555 KIF13AQ9H1H9 1805 aa31.26■■■□□ 2.59
RPUSD3-207ENST00000433555 PLB1Q6P1J6 1458 aa31.25■■■□□ 2.59
RPUSD3-207ENST00000433555 EFCAB5A4FU69 1503 aa31.22■■■□□ 2.59
RPUSD3-207ENST00000433555 ZCCHC11Q5TAX3 1644 aaKnown RBP31.21■■■□□ 2.59
RPUSD3-207ENST00000433555 TRHP20396 242 aaPredicted RBP31.2■■■□□ 2.59
RPUSD3-207ENST00000433555 P3H3Q8IVL6 736 aa31.19■■■□□ 2.58
RPUSD3-207ENST00000433555 RANGAP1P46060 587 aaPredicted RBP31.18■■■□□ 2.58
RPUSD3-207ENST00000433555 FHOD3Q2V2M9 1422 aa31.17■■■□□ 2.58
RPUSD3-207ENST00000433555 KDM5BQ9UGL1 1544 aa31.16■■■□□ 2.58
RPUSD3-207ENST00000433555 UBTFP17480 764 aaKnown RBP31.16■■■□□ 2.58
RPUSD3-207ENST00000433555 DIP2BQ9P265 1576 aa31.15■■■□□ 2.58
RPUSD3-207ENST00000433555 RAPGEF6Q8TEU7 1601 aa31.1■■■□□ 2.57
RPUSD3-207ENST00000433555 NPM1P06748 294 aaKnown RBP eCLIP31.1■■■□□ 2.57
RPUSD3-207ENST00000433555 ARHGAP35Q9NRY4 1499 aa31.08■■■□□ 2.57
RPUSD3-207ENST00000433555 ABCC10Q5T3U5 1492 aa31.08■■■□□ 2.57
RPUSD3-207ENST00000433555 ASXL2Q76L83 1435 aa31.04■■■□□ 2.56
RPUSD3-207ENST00000433555 NUP153P49790 1475 aaKnown RBP30.95■■■□□ 2.55
RPUSD3-207ENST00000433555 ATP10BO94823 1461 aa30.91■■■□□ 2.54
RPUSD3-207ENST00000433555 GLI2P10070 1586 aa30.91■■■□□ 2.54
RPUSD3-207ENST00000433555 TSPOAP1O95153 1857 aa30.91■■■□□ 2.54
RPUSD3-207ENST00000433555 WDR7Q9Y4E6 1490 aa30.9■■■□□ 2.54
RPUSD3-207ENST00000433555 EPRSP07814 1512 aaKnown RBP30.89■■■□□ 2.54
RPUSD3-207ENST00000433555 FAM69CQ0P6D2 419 aa30.89■■■□□ 2.54
RPUSD3-207ENST00000433555 ARID3CA6NKF2 412 aa30.88■■■□□ 2.53
RPUSD3-207ENST00000433555 PPRC1Q5VV67 1664 aaKnown RBP30.87■■■□□ 2.53
RPUSD3-207ENST00000433555 MAP3K4Q9Y6R4 1608 aa30.84■■■□□ 2.53
RPUSD3-207ENST00000433555 LRRIQ1Q96JM4 1722 aa30.84■■■□□ 2.53
RPUSD3-207ENST00000433555 CLIP1P30622 1438 aa30.82■■■□□ 2.52
RPUSD3-207ENST00000433555 HECW1Q76N89 1606 aa30.82■■■□□ 2.52
RPUSD3-207ENST00000433555 FMN1Q68DA7 1419 aa30.81■■■□□ 2.52
RPUSD3-207ENST00000433555 PCF11O94913 1555 aaKnown RBP30.81■■■□□ 2.52
RPUSD3-207ENST00000433555 CDK13Q14004 1512 aaKnown RBP30.78■■■□□ 2.52
RPUSD3-207ENST00000433555 CFAP43Q8NDM7 1665 aa30.73■■■□□ 2.51
RPUSD3-207ENST00000433555 CEP162Q5TB80 1403 aa30.73■■■□□ 2.51
RPUSD3-207ENST00000433555 LOC105371045A0A1W2PR82 267 aa30.7■■■□□ 2.51
RPUSD3-207ENST00000433555 ABCA9Q8IUA7 1624 aa30.66■■■□□ 2.5
RPUSD3-207ENST00000433555 CASKIN1Q8WXD9 1431 aa30.64■■■□□ 2.49
RPUSD3-207ENST00000433555 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.61■■■□□ 2.49
RPUSD3-207ENST00000433555 HNRNPUL2Q1KMD3 747 aaKnown RBP30.61■■■□□ 2.49
RPUSD3-207ENST00000433555 KCNH8Q96L42 1107 aa30.61■■■□□ 2.49
RPUSD3-207ENST00000433555 KDM6BO15054 1643 aa30.6■■■□□ 2.49
RPUSD3-207ENST00000433555 FYCO1Q9BQS8 1478 aa30.6■■■□□ 2.49
RPUSD3-207ENST00000433555 TTC37Q6PGP7 1564 aa30.55■■■□□ 2.48
RPUSD3-207ENST00000433555 ATP1B4Q9UN42 357 aaPredicted RBP30.55■■■□□ 2.48
RPUSD3-207ENST00000433555 CD109Q6YHK3 1445 aa30.55■■■□□ 2.48
RPUSD3-207ENST00000433555 MAGI3Q5TCQ9 1506 aa30.54■■■□□ 2.48
RPUSD3-207ENST00000433555 TEX14Q8IWB6 1497 aa30.52■■■□□ 2.48
RPUSD3-207ENST00000433555 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.52■■■□□ 2.48
RPUSD3-207ENST00000433555 KIF14Q15058 1648 aa30.51■■■□□ 2.48
RPUSD3-207ENST00000433555 CCDC18Q5T9S5 1454 aa30.51■■■□□ 2.48
RPUSD3-207ENST00000433555 PLEKHD1A6NEE1 506 aa30.46■■■□□ 2.47
RPUSD3-207ENST00000433555 COL17A1Q9UMD9 1497 aaPredicted RBP30.44■■■□□ 2.46
RPUSD3-207ENST00000433555 TROQ12816 1431 aaPredicted RBP30.42■■■□□ 2.46
RPUSD3-207ENST00000433555 MYO5CQ9NQX4 1742 aa30.39■■■□□ 2.45
RPUSD3-207ENST00000433555 VPS8Q8N3P4 1428 aa30.33■■■□□ 2.45
RPUSD3-207ENST00000433555 CFAP74Q9C0B2 1584 aa30.31■■■□□ 2.44
RPUSD3-207ENST00000433555 CDK11AQ9UQ88 783 aaPredicted RBP30.3■■■□□ 2.44
RPUSD3-207ENST00000433555 NEO1Q92859 1461 aa30.3■■■□□ 2.44
RPUSD3-207ENST00000433555 ARAP3Q8WWN8 1544 aa30.27■■■□□ 2.44
RPUSD3-207ENST00000433555 FRMPD1Q5SYB0 1578 aa30.27■■■□□ 2.44
RPUSD3-207ENST00000433555 PREX2Q70Z35 1606 aa30.25■■■□□ 2.43
RPUSD3-207ENST00000433555 FANCAO15360 1455 aa30.25■■■□□ 2.43
RPUSD3-207ENST00000433555 CDC42BPAQ5VT25 1732 aa30.25■■■□□ 2.43
RPUSD3-207ENST00000433555 CDC42BPBQ9Y5S2 1711 aa30.25■■■□□ 2.43
RPUSD3-207ENST00000433555 TIAM1Q13009 1591 aa30.24■■■□□ 2.43
RPUSD3-207ENST00000433555 PLCH2O75038 1416 aa30.22■■■□□ 2.43
RPUSD3-207ENST00000433555 EHBP1L1Q8N3D4 1523 aa30.22■■■□□ 2.43
RPUSD3-207ENST00000433555 RICTORQ6R327 1708 aa30.21■■■□□ 2.43
RPUSD3-207ENST00000433555 AKNAQ7Z591 1439 aa30.17■■■□□ 2.42
RPUSD3-207ENST00000433555 PHLDB1Q86UU1 1377 aa30.16■■■□□ 2.42
RPUSD3-207ENST00000433555 ARHGAP5Q13017 1502 aa30.16■■■□□ 2.42
RPUSD3-207ENST00000433555 MTUS2Q5JR59 1369 aa30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms