RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 ARAP1Q96P48 1450 aa16.63■□□□□ 0.25
NEFM-202ENST00000433454 SYNJ2O15056 1496 aa16.61■□□□□ 0.25
NEFM-202ENST00000433454 GRIN2AQ12879 1464 aa16.6■□□□□ 0.25
NEFM-202ENST00000433454 EFCAB5A4FU69 1503 aa16.6■□□□□ 0.25
NEFM-202ENST00000433454 IQGAP2Q13576 1575 aa16.56■□□□□ 0.24
NEFM-202ENST00000433454 CHMP7Q8WUX9 453 aaPredicted RBP16.55■□□□□ 0.24
NEFM-202ENST00000433454 SAMD9Q5K651 1589 aa16.53■□□□□ 0.24
NEFM-202ENST00000433454 KIAA0586Q9BVV6 1533 aa16.51■□□□□ 0.23
NEFM-202ENST00000433454 FBLN2P98095 1184 aa16.5■□□□□ 0.23
NEFM-202ENST00000433454 CEP170Q5SW79 1584 aa16.49■□□□□ 0.23
NEFM-202ENST00000433454 FHOD3Q2V2M9 1422 aa16.49■□□□□ 0.23
NEFM-202ENST00000433454 NUP160Q12769 1436 aa16.48■□□□□ 0.23
NEFM-202ENST00000433454 APLP2Q06481 763 aa16.47■□□□□ 0.23
NEFM-202ENST00000433454 TRIM26Q12899 539 aaPredicted RBP16.47■□□□□ 0.23
NEFM-202ENST00000433454 PPARGC1BQ86YN6 1023 aaKnown RBP16.47■□□□□ 0.23
NEFM-202ENST00000433454 UGGT2Q9NYU1 1516 aa16.46■□□□□ 0.23
NEFM-202ENST00000433454 P3H3Q8IVL6 736 aa16.46■□□□□ 0.23
NEFM-202ENST00000433454 CHD1O14646 1710 aa16.45■□□□□ 0.22
NEFM-202ENST00000433454 PCGF6Q9BYE7 350 aa16.44■□□□□ 0.22
NEFM-202ENST00000433454 FMN1Q68DA7 1419 aa16.43■□□□□ 0.22
NEFM-202ENST00000433454 PCF11O94913 1555 aaKnown RBP16.42■□□□□ 0.22
NEFM-202ENST00000433454 FYCO1Q9BQS8 1478 aa16.4■□□□□ 0.22
NEFM-202ENST00000433454 KIAA0556O60303 1618 aa16.39■□□□□ 0.21
NEFM-202ENST00000433454 CASKIN1Q8WXD9 1431 aa16.38■□□□□ 0.21
NEFM-202ENST00000433454 TTBK1Q5TCY1 1321 aaPredicted RBP16.37■□□□□ 0.21
NEFM-202ENST00000433454 DISP1Q96F81 1524 aa16.37■□□□□ 0.21
NEFM-202ENST00000433454 MAP3K1Q13233 1512 aa16.36■□□□□ 0.21
NEFM-202ENST00000433454 TIAM1Q13009 1591 aa16.35■□□□□ 0.21
NEFM-202ENST00000433454 CFAP43Q8NDM7 1665 aa16.34■□□□□ 0.21
NEFM-202ENST00000433454 JPH4Q96JJ6 628 aa16.32■□□□□ 0.2
NEFM-202ENST00000433454 CARMIL2Q6F5E8 1435 aa16.32■□□□□ 0.2
NEFM-202ENST00000433454 ATP1B4Q9UN42 357 aaPredicted RBP16.29■□□□□ 0.2
NEFM-202ENST00000433454 KANK4Q5T7N3 995 aaPredicted RBP16.28■□□□□ 0.2
NEFM-202ENST00000433454 HECW1Q76N89 1606 aa16.28■□□□□ 0.2
NEFM-202ENST00000433454 SHROOM2Q13796 1616 aa16.27■□□□□ 0.19
NEFM-202ENST00000433454 LRRC9Q6ZRR7 1453 aa16.26■□□□□ 0.19
NEFM-202ENST00000433454 CLASP1Q7Z460 1538 aa16.25■□□□□ 0.19
NEFM-202ENST00000433454 LRRIQ1Q96JM4 1722 aa16.25■□□□□ 0.19
NEFM-202ENST00000433454 PRG4Q92954 1404 aaPredicted RBP16.24■□□□□ 0.19
NEFM-202ENST00000433454 CCDC18Q5T9S5 1454 aa16.24■□□□□ 0.19
NEFM-202ENST00000433454 RAPGEF6Q8TEU7 1601 aa16.22■□□□□ 0.19
NEFM-202ENST00000433454 EPRSP07814 1512 aaKnown RBP16.19■□□□□ 0.18
NEFM-202ENST00000433454 NUP153P49790 1475 aaKnown RBP16.17■□□□□ 0.18
NEFM-202ENST00000433454 MTUS2Q5JR59 1369 aa16.16■□□□□ 0.18
NEFM-202ENST00000433454 PLB1Q6P1J6 1458 aa16.16■□□□□ 0.18
NEFM-202ENST00000433454 EHBP1L1Q8N3D4 1523 aa16.16■□□□□ 0.18
NEFM-202ENST00000433454 CDK13Q14004 1512 aaKnown RBP16.15■□□□□ 0.18
NEFM-202ENST00000433454 ABCA8O94911 1581 aa16.14■□□□□ 0.17
NEFM-202ENST00000433454 PTPRGP23470 1445 aa16.14■□□□□ 0.17
NEFM-202ENST00000433454 RRBP1Q9P2E9 1410 aaKnown RBP16.13■□□□□ 0.17
NEFM-202ENST00000433454 ERCC6L2Q5T890 1561 aa16.13■□□□□ 0.17
NEFM-202ENST00000433454 SUPT6HQ7KZ85 1726 aaKnown RBP16.11■□□□□ 0.17
NEFM-202ENST00000433454 MAGI3Q5TCQ9 1506 aa16.11■□□□□ 0.17
NEFM-202ENST00000433454 PHLDB1Q86UU1 1377 aa16.1■□□□□ 0.17
NEFM-202ENST00000433454 ARID3CA6NKF2 412 aa16.09■□□□□ 0.17
NEFM-202ENST00000433454 OSCARQ8IYS5 282 aa16.09■□□□□ 0.17
NEFM-202ENST00000433454 CCNB3Q8WWL7 1395 aa16.08■□□□□ 0.17
NEFM-202ENST00000433454 NCOA2Q15596 1464 aa16.07■□□□□ 0.16
NEFM-202ENST00000433454 CDK11AQ9UQ88 783 aaPredicted RBP16.06■□□□□ 0.16
NEFM-202ENST00000433454 UACAQ9BZF9 1416 aa16.05■□□□□ 0.16
NEFM-202ENST00000433454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.05■□□□□ 0.16
NEFM-202ENST00000433454 HNRNPUL2Q1KMD3 747 aaKnown RBP16.05■□□□□ 0.16
NEFM-202ENST00000433454 ARHGEF11O15085 1522 aa16.04■□□□□ 0.16
NEFM-202ENST00000433454 ABCC2Q92887 1545 aa16.02■□□□□ 0.16
NEFM-202ENST00000433454 ATP10BO94823 1461 aa16.01■□□□□ 0.15
NEFM-202ENST00000433454 TROQ12816 1431 aaPredicted RBP16.01■□□□□ 0.15
NEFM-202ENST00000433454 MYOM3Q5VTT5 1437 aa16.01■□□□□ 0.15
NEFM-202ENST00000433454 FGD6Q6ZV73 1430 aa16■□□□□ 0.15
NEFM-202ENST00000433454 ADCY10Q96PN6 1610 aa15.98■□□□□ 0.15
NEFM-202ENST00000433454 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.97■□□□□ 0.15
NEFM-202ENST00000433454 UHRF1BP1LA0JNW5 1464 aa15.97■□□□□ 0.15
NEFM-202ENST00000433454 FAM50AQ14320 339 aaKnown RBP15.95■□□□□ 0.14
NEFM-202ENST00000433454 PLEKHD1A6NEE1 506 aa15.95■□□□□ 0.14
NEFM-202ENST00000433454 KIF14Q15058 1648 aa15.94■□□□□ 0.14
NEFM-202ENST00000433454 PTPN23Q9H3S7 1636 aa15.93■□□□□ 0.14
NEFM-202ENST00000433454 HRCP23327 699 aa15.93■□□□□ 0.14
NEFM-202ENST00000433454 MIA2Q96PC5 1412 aa15.92■□□□□ 0.14
NEFM-202ENST00000433454 ITSN2Q9NZM3 1697 aa15.91■□□□□ 0.14
NEFM-202ENST00000433454 KDM5BQ9UGL1 1544 aa15.91■□□□□ 0.14
NEFM-202ENST00000433454 ZCCHC11Q5TAX3 1644 aaKnown RBP15.91■□□□□ 0.14
NEFM-202ENST00000433454 TCOF1Q13428 1488 aaKnown RBP15.9■□□□□ 0.14
NEFM-202ENST00000433454 ITGAEP38570 1179 aa15.9■□□□□ 0.14
NEFM-202ENST00000433454 ABCC10Q5T3U5 1492 aa15.86■□□□□ 0.13
NEFM-202ENST00000433454 GPATCH8Q9UKJ3 1502 aaKnown RBP15.85■□□□□ 0.13
NEFM-202ENST00000433454 CDC42BPAQ5VT25 1732 aa15.84■□□□□ 0.13
NEFM-202ENST00000433454 CCER1Q8TC90 406 aaPredicted RBP15.84■□□□□ 0.13
NEFM-202ENST00000433454 CFDP1Q9UEE9 299 aaPredicted RBP15.81■□□□□ 0.12
NEFM-202ENST00000433454 ZEB1P37275 1124 aaPredicted RBP15.8■□□□□ 0.12
NEFM-202ENST00000433454 CAMSAP2Q08AD1 1489 aa15.8■□□□□ 0.12
NEFM-202ENST00000433454 TTC37Q6PGP7 1564 aa15.79■□□□□ 0.12
NEFM-202ENST00000433454 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.79■□□□□ 0.12
NEFM-202ENST00000433454 PREX2Q70Z35 1606 aa15.79■□□□□ 0.12
NEFM-202ENST00000433454 PTPRKQ15262 1439 aa15.79■□□□□ 0.12
NEFM-202ENST00000433454 SETD5Q9C0A6 1442 aa15.78■□□□□ 0.12
NEFM-202ENST00000433454 DNMT1P26358 1616 aaKnown RBP15.78■□□□□ 0.12
NEFM-202ENST00000433454 WDR7Q9Y4E6 1490 aa15.77■□□□□ 0.12
NEFM-202ENST00000433454 RIMBP3CA6NJZ7 1639 aa15.76■□□□□ 0.11
NEFM-202ENST00000433454 RIMBP3BA6NNM3 1639 aa15.76■□□□□ 0.11
NEFM-202ENST00000433454 RIMBP3Q9UFD9 1639 aa15.76■□□□□ 0.11
NEFM-202ENST00000433454 RAB3GAP2Q9H2M9 1393 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms