RNA–Protein interactions for RNA: ENST00000433179.3

PERM1-202, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PERM1, Length 3,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-202ENST00000433179 VPS8Q8N3P4 1428 aa19.86■□□□□ 0.77
PERM1-202ENST00000433179 CLIP1P30622 1438 aa19.84■□□□□ 0.77
PERM1-202ENST00000433179 SAMD9Q5K651 1589 aa19.83■□□□□ 0.76
PERM1-202ENST00000433179 ADAMTS12P58397 1594 aa19.82■□□□□ 0.76
PERM1-202ENST00000433179 MAP3K1Q13233 1512 aa19.81■□□□□ 0.76
PERM1-202ENST00000433179 ARHGAP35Q9NRY4 1499 aa19.8■□□□□ 0.76
PERM1-202ENST00000433179 EFCAB5A4FU69 1503 aa19.8■□□□□ 0.76
PERM1-202ENST00000433179 IFT140Q96RY7 1462 aa19.77■□□□□ 0.76
PERM1-202ENST00000433179 CARMIL1Q5VZK9 1371 aa19.76■□□□□ 0.75
PERM1-202ENST00000433179 CFAP43Q8NDM7 1665 aa19.75■□□□□ 0.75
PERM1-202ENST00000433179 GAPVD1Q14C86 1478 aa19.75■□□□□ 0.75
PERM1-202ENST00000433179 BCL11AQ9H165 835 aa19.74■□□□□ 0.75
PERM1-202ENST00000433179 DIEXFQ68CQ4 756 aaKnown RBP19.71■□□□□ 0.75
PERM1-202ENST00000433179 EIF4G3O43432 1585 aaKnown RBP19.71■□□□□ 0.75
PERM1-202ENST00000433179 AQRO60306 1485 aaKnown RBP eCLIP19.68■□□□□ 0.74
PERM1-202ENST00000433179 HNRNPUL2Q1KMD3 747 aaKnown RBP19.67■□□□□ 0.74
PERM1-202ENST00000433179 YTHDC1Q96MU7 727 aaKnown RBP19.67■□□□□ 0.74
PERM1-202ENST00000433179 LRRIQ1Q96JM4 1722 aa19.63■□□□□ 0.73
PERM1-202ENST00000433179 GRIN2BQ13224 1484 aa19.61■□□□□ 0.73
PERM1-202ENST00000433179 FHAD1B1AJZ9 1412 aa19.6■□□□□ 0.73
PERM1-202ENST00000433179 TIAM1Q13009 1591 aa19.58■□□□□ 0.73
PERM1-202ENST00000433179 PCF11O94913 1555 aaKnown RBP19.57■□□□□ 0.72
PERM1-202ENST00000433179 SNAPC4Q5SXM2 1469 aa19.56■□□□□ 0.72
PERM1-202ENST00000433179 UGGT2Q9NYU1 1516 aa19.55■□□□□ 0.72
PERM1-202ENST00000433179 ZNF608Q9ULD9 1512 aaPredicted RBP19.54■□□□□ 0.72
PERM1-202ENST00000433179 MAGI1Q96QZ7 1491 aaPredicted RBP19.53■□□□□ 0.72
PERM1-202ENST00000433179 FYCO1Q9BQS8 1478 aa19.53■□□□□ 0.72
PERM1-202ENST00000433179 IQGAP2Q13576 1575 aa19.51■□□□□ 0.71
PERM1-202ENST00000433179 TDRD9Q8NDG6 1382 aaKnown RBP19.49■□□□□ 0.71
PERM1-202ENST00000433179 CASKIN1Q8WXD9 1431 aa19.46■□□□□ 0.71
PERM1-202ENST00000433179 RRBP1Q9P2E9 1410 aaKnown RBP19.45■□□□□ 0.7
PERM1-202ENST00000433179 APLP2Q06481 763 aa19.43■□□□□ 0.7
PERM1-202ENST00000433179 GRIN2AQ12879 1464 aa19.42■□□□□ 0.7
PERM1-202ENST00000433179 ERCC6Q03468 1493 aa19.42■□□□□ 0.7
PERM1-202ENST00000433179 CEP170Q5SW79 1584 aa19.42■□□□□ 0.7
PERM1-202ENST00000433179 KIAA0556O60303 1618 aa19.4■□□□□ 0.7
PERM1-202ENST00000433179 SYNJ2O15056 1496 aa19.39■□□□□ 0.7
PERM1-202ENST00000433179 ARHGEF11O15085 1522 aa19.39■□□□□ 0.7
PERM1-202ENST00000433179 NUP160Q12769 1436 aa19.39■□□□□ 0.69
PERM1-202ENST00000433179 KIAA0586Q9BVV6 1533 aa19.38■□□□□ 0.69
PERM1-202ENST00000433179 LRRC9Q6ZRR7 1453 aa19.37■□□□□ 0.69
PERM1-202ENST00000433179 KANK4Q5T7N3 995 aaPredicted RBP19.36■□□□□ 0.69
PERM1-202ENST00000433179 DISP1Q96F81 1524 aa19.35■□□□□ 0.69
PERM1-202ENST00000433179 FMN1Q68DA7 1419 aa19.35■□□□□ 0.69
PERM1-202ENST00000433179 SHROOM2Q13796 1616 aa19.34■□□□□ 0.69
PERM1-202ENST00000433179 ITGAEP38570 1179 aa19.32■□□□□ 0.68
PERM1-202ENST00000433179 PRKCSHP14314 528 aaPredicted RBP19.31■□□□□ 0.68
PERM1-202ENST00000433179 HECW1Q76N89 1606 aa19.31■□□□□ 0.68
PERM1-202ENST00000433179 ANP32EQ9BTT0 268 aa19.31■□□□□ 0.68
PERM1-202ENST00000433179 ZNF316A6NFI3 1004 aaPredicted RBP19.29■□□□□ 0.68
PERM1-202ENST00000433179 FHOD3Q2V2M9 1422 aa19.29■□□□□ 0.68
PERM1-202ENST00000433179 P3H3Q8IVL6 736 aa19.28■□□□□ 0.68
PERM1-202ENST00000433179 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.26■□□□□ 0.67
PERM1-202ENST00000433179 CHD1O14646 1710 aa19.26■□□□□ 0.67
PERM1-202ENST00000433179 CCDC18Q5T9S5 1454 aa19.25■□□□□ 0.67
PERM1-202ENST00000433179 EHBP1L1Q8N3D4 1523 aa19.24■□□□□ 0.67
PERM1-202ENST00000433179 ADCY10Q96PN6 1610 aa19.23■□□□□ 0.67
PERM1-202ENST00000433179 ATP1B4Q9UN42 357 aaPredicted RBP19.22■□□□□ 0.67
PERM1-202ENST00000433179 MAGI3Q5TCQ9 1506 aa19.22■□□□□ 0.67
PERM1-202ENST00000433179 MIER1Q8N108 512 aa19.21■□□□□ 0.67
PERM1-202ENST00000433179 SUPT6HQ7KZ85 1726 aaKnown RBP19.2■□□□□ 0.66
PERM1-202ENST00000433179 RAPGEF6Q8TEU7 1601 aa19.2■□□□□ 0.66
PERM1-202ENST00000433179 ABCA8O94911 1581 aa19.15■□□□□ 0.66
PERM1-202ENST00000433179 CLASP1Q7Z460 1538 aa19.14■□□□□ 0.65
PERM1-202ENST00000433179 EPRSP07814 1512 aaKnown RBP19.12■□□□□ 0.65
PERM1-202ENST00000433179 TCOF1Q13428 1488 aaKnown RBP19.12■□□□□ 0.65
PERM1-202ENST00000433179 PHLDB1Q86UU1 1377 aa19.09■□□□□ 0.65
PERM1-202ENST00000433179 NUP153P49790 1475 aaKnown RBP19.09■□□□□ 0.65
PERM1-202ENST00000433179 CCNB3Q8WWL7 1395 aa19.07■□□□□ 0.64
PERM1-202ENST00000433179 GCC2Q8IWJ2 1684 aa19.03■□□□□ 0.64
PERM1-202ENST00000433179 NCOA2Q15596 1464 aa19.01■□□□□ 0.63
PERM1-202ENST00000433179 PTPN23Q9H3S7 1636 aa19■□□□□ 0.63
PERM1-202ENST00000433179 TSHZ2Q9NRE2 1034 aa18.99■□□□□ 0.63
PERM1-202ENST00000433179 FGD6Q6ZV73 1430 aa18.98■□□□□ 0.63
PERM1-202ENST00000433179 FBLN2P98095 1184 aa18.98■□□□□ 0.63
PERM1-202ENST00000433179 ITSN2Q9NZM3 1697 aa18.97■□□□□ 0.63
PERM1-202ENST00000433179 CROCC2H7BZ55 1655 aa18.97■□□□□ 0.63
PERM1-202ENST00000433179 CDK13Q14004 1512 aaKnown RBP18.96■□□□□ 0.63
PERM1-202ENST00000433179 MYOM3Q5VTT5 1437 aa18.96■□□□□ 0.63
PERM1-202ENST00000433179 ARID3CA6NKF2 412 aa18.95■□□□□ 0.62
PERM1-202ENST00000433179 FAM50AQ14320 339 aaKnown RBP18.95■□□□□ 0.62
PERM1-202ENST00000433179 AKNAQ7Z591 1439 aa18.94■□□□□ 0.62
PERM1-202ENST00000433179 MIA2Q96PC5 1412 aa18.94■□□□□ 0.62
PERM1-202ENST00000433179 CLSPNQ9HAW4 1339 aa18.93■□□□□ 0.62
PERM1-202ENST00000433179 SUPT16HQ9Y5B9 1047 aaKnown RBP18.92■□□□□ 0.62
PERM1-202ENST00000433179 DHX57Q6P158 1386 aaKnown RBP18.92■□□□□ 0.62
PERM1-202ENST00000433179 DNMT1P26358 1616 aaKnown RBP18.9■□□□□ 0.62
PERM1-202ENST00000433179 CDC42BPAQ5VT25 1732 aa18.9■□□□□ 0.62
PERM1-202ENST00000433179 CARMIL2Q6F5E8 1435 aa18.89■□□□□ 0.61
PERM1-202ENST00000433179 MAPKBP1O60336 1514 aa18.88■□□□□ 0.61
PERM1-202ENST00000433179 KIF14Q15058 1648 aa18.86■□□□□ 0.61
PERM1-202ENST00000433179 ABCC10Q5T3U5 1492 aa18.86■□□□□ 0.61
PERM1-202ENST00000433179 UHRF1BP1LA0JNW5 1464 aa18.85■□□□□ 0.61
PERM1-202ENST00000433179 ADGBQ8N7X0 1667 aa18.85■□□□□ 0.61
PERM1-202ENST00000433179 PLB1Q6P1J6 1458 aa18.85■□□□□ 0.61
PERM1-202ENST00000433179 HFM1A2PYH4 1435 aa18.83■□□□□ 0.6
PERM1-202ENST00000433179 TROQ12816 1431 aaPredicted RBP18.82■□□□□ 0.6
PERM1-202ENST00000433179 PTPRKQ15262 1439 aa18.82■□□□□ 0.6
PERM1-202ENST00000433179 ERICH6Q7L0X2 663 aa18.82■□□□□ 0.6
PERM1-202ENST00000433179 BCANQ96GW7 911 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms