RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 NUP160Q12769 1436 aa12.01□□□□□ -0.49
CNKSR3-202ENST00000433165 LOC105371045A0A1W2PR82 267 aa12□□□□□ -0.49
CNKSR3-202ENST00000433165 ACIN1Q9UKV3 1341 aaKnown RBP11.97□□□□□ -0.49
CNKSR3-202ENST00000433165 ARAP1Q96P48 1450 aa11.96□□□□□ -0.49
CNKSR3-202ENST00000433165 CEP170Q5SW79 1584 aa11.96□□□□□ -0.49
CNKSR3-202ENST00000433165 SHROOM2Q13796 1616 aa11.95□□□□□ -0.5
CNKSR3-202ENST00000433165 CYB5RLQ6IPT4 315 aa11.92□□□□□ -0.5
CNKSR3-202ENST00000433165 IGF1RP08069 1367 aa11.91□□□□□ -0.5
CNKSR3-202ENST00000433165 RUSC2Q8N2Y8 1516 aa11.91□□□□□ -0.5
CNKSR3-202ENST00000433165 KIAA0586Q9BVV6 1533 aa11.89□□□□□ -0.51
CNKSR3-202ENST00000433165 CARMIL1Q5VZK9 1371 aa11.88□□□□□ -0.51
CNKSR3-202ENST00000433165 NEUROD1Q13562 356 aa11.88□□□□□ -0.51
CNKSR3-202ENST00000433165 PRG4Q92954 1404 aaPredicted RBP11.84□□□□□ -0.51
CNKSR3-202ENST00000433165 RAPGEF2Q9Y4G8 1499 aa11.84□□□□□ -0.51
CNKSR3-202ENST00000433165 JPH4Q96JJ6 628 aa11.84□□□□□ -0.51
CNKSR3-202ENST00000433165 GTF3C3Q9Y5Q9 886 aa11.82□□□□□ -0.52
CNKSR3-202ENST00000433165 EEA1Q15075 1411 aa11.82□□□□□ -0.52
CNKSR3-202ENST00000433165 CARMIL2Q6F5E8 1435 aa11.82□□□□□ -0.52
CNKSR3-202ENST00000433165 IQGAP2Q13576 1575 aa11.81□□□□□ -0.52
CNKSR3-202ENST00000433165 CENPBP07199 599 aaPredicted RBP11.8□□□□□ -0.52
CNKSR3-202ENST00000433165 ERCC6L2Q5T890 1561 aa11.8□□□□□ -0.52
CNKSR3-202ENST00000433165 CTTNBP2Q8WZ74 1663 aa11.77□□□□□ -0.53
CNKSR3-202ENST00000433165 TRHP20396 242 aaPredicted RBP11.76□□□□□ -0.53
CNKSR3-202ENST00000433165 NPM1P06748 294 aaKnown RBP eCLIP11.75□□□□□ -0.53
CNKSR3-202ENST00000433165 UGGT2Q9NYU1 1516 aa11.74□□□□□ -0.53
CNKSR3-202ENST00000433165 GOLGA3Q08378 1498 aa11.74□□□□□ -0.53
CNKSR3-202ENST00000433165 TNIKQ9UKE5 1360 aa11.74□□□□□ -0.53
CNKSR3-202ENST00000433165 PRXQ9BXM0 1461 aa11.73□□□□□ -0.53
CNKSR3-202ENST00000433165 FAM9AQ8IZU1 332 aaPredicted RBP11.72□□□□□ -0.53
CNKSR3-202ENST00000433165 PTPRGP23470 1445 aa11.71□□□□□ -0.53
CNKSR3-202ENST00000433165 MAPKBP1O60336 1514 aa11.71□□□□□ -0.54
CNKSR3-202ENST00000433165 KIAA0556O60303 1618 aa11.69□□□□□ -0.54
CNKSR3-202ENST00000433165 CSRNP3Q8WYN3 585 aa11.69□□□□□ -0.54
CNKSR3-202ENST00000433165 UHRF1BP1LA0JNW5 1464 aa11.68□□□□□ -0.54
CNKSR3-202ENST00000433165 ADCY10Q96PN6 1610 aa11.68□□□□□ -0.54
CNKSR3-202ENST00000433165 DISP1Q96F81 1524 aa11.67□□□□□ -0.54
CNKSR3-202ENST00000433165 DIEXFQ68CQ4 756 aaKnown RBP11.66□□□□□ -0.54
CNKSR3-202ENST00000433165 UACAQ9BZF9 1416 aa11.64□□□□□ -0.55
CNKSR3-202ENST00000433165 KIF21BO75037 1637 aa11.64□□□□□ -0.55
CNKSR3-202ENST00000433165 ABCC2Q92887 1545 aa11.64□□□□□ -0.55
CNKSR3-202ENST00000433165 TTBK1Q5TCY1 1321 aaPredicted RBP11.64□□□□□ -0.55
CNKSR3-202ENST00000433165 ABCC10Q5T3U5 1492 aa11.62□□□□□ -0.55
CNKSR3-202ENST00000433165 PLB1Q6P1J6 1458 aa11.62□□□□□ -0.55
CNKSR3-202ENST00000433165 KIF13AQ9H1H9 1805 aa11.6□□□□□ -0.55
CNKSR3-202ENST00000433165 DIP2BQ9P265 1576 aa11.6□□□□□ -0.55
CNKSR3-202ENST00000433165 KDM5BQ9UGL1 1544 aa11.59□□□□□ -0.55
CNKSR3-202ENST00000433165 SAMD9Q5K651 1589 aa11.58□□□□□ -0.56
CNKSR3-202ENST00000433165 EFCAB5A4FU69 1503 aa11.57□□□□□ -0.56
CNKSR3-202ENST00000433165 GLI2P10070 1586 aa11.57□□□□□ -0.56
CNKSR3-202ENST00000433165 ABCA8O94911 1581 aa11.56□□□□□ -0.56
CNKSR3-202ENST00000433165 CCER1Q8TC90 406 aaPredicted RBP11.55□□□□□ -0.56
CNKSR3-202ENST00000433165 ZCCHC11Q5TAX3 1644 aaKnown RBP11.55□□□□□ -0.56
CNKSR3-202ENST00000433165 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.55□□□□□ -0.56
CNKSR3-202ENST00000433165 FAM69CQ0P6D2 419 aa11.55□□□□□ -0.56
CNKSR3-202ENST00000433165 ASXL2Q76L83 1435 aa11.55□□□□□ -0.56
CNKSR3-202ENST00000433165 TEX14Q8IWB6 1497 aa11.5□□□□□ -0.57
CNKSR3-202ENST00000433165 WDR7Q9Y4E6 1490 aa11.5□□□□□ -0.57
CNKSR3-202ENST00000433165 RAPGEF6Q8TEU7 1601 aa11.5□□□□□ -0.57
CNKSR3-202ENST00000433165 EPRSP07814 1512 aaKnown RBP11.49□□□□□ -0.57
CNKSR3-202ENST00000433165 MAP3K4Q9Y6R4 1608 aa11.48□□□□□ -0.57
CNKSR3-202ENST00000433165 CFAP43Q8NDM7 1665 aa11.48□□□□□ -0.57
CNKSR3-202ENST00000433165 KDM6BO15054 1643 aa11.47□□□□□ -0.57
CNKSR3-202ENST00000433165 UBTFP17480 764 aaKnown RBP11.46□□□□□ -0.57
CNKSR3-202ENST00000433165 FMN1Q68DA7 1419 aa11.45□□□□□ -0.58
CNKSR3-202ENST00000433165 ZNF316A6NFI3 1004 aaPredicted RBP11.44□□□□□ -0.58
CNKSR3-202ENST00000433165 TSPOAP1O95153 1857 aa11.44□□□□□ -0.58
CNKSR3-202ENST00000433165 P3H3Q8IVL6 736 aa11.42□□□□□ -0.58
CNKSR3-202ENST00000433165 FHOD3Q2V2M9 1422 aa11.42□□□□□ -0.58
CNKSR3-202ENST00000433165 MAGI3Q5TCQ9 1506 aa11.42□□□□□ -0.58
CNKSR3-202ENST00000433165 ATP10BO94823 1461 aa11.41□□□□□ -0.58
CNKSR3-202ENST00000433165 PPRC1Q5VV67 1664 aaKnown RBP11.41□□□□□ -0.58
CNKSR3-202ENST00000433165 HECW1Q76N89 1606 aa11.41□□□□□ -0.58
CNKSR3-202ENST00000433165 PHLDB1Q86UU1 1377 aa11.41□□□□□ -0.58
CNKSR3-202ENST00000433165 CD109Q6YHK3 1445 aa11.39□□□□□ -0.59
CNKSR3-202ENST00000433165 CLSPNQ9HAW4 1339 aa11.39□□□□□ -0.59
CNKSR3-202ENST00000433165 NUP153P49790 1475 aaKnown RBP11.39□□□□□ -0.59
CNKSR3-202ENST00000433165 ABCA9Q8IUA7 1624 aa11.39□□□□□ -0.59
CNKSR3-202ENST00000433165 BCL11AQ9H165 835 aa11.38□□□□□ -0.59
CNKSR3-202ENST00000433165 HNRNPUL2Q1KMD3 747 aaKnown RBP11.38□□□□□ -0.59
CNKSR3-202ENST00000433165 PLEKHD1A6NEE1 506 aa11.37□□□□□ -0.59
CNKSR3-202ENST00000433165 RANGAP1P46060 587 aaPredicted RBP11.37□□□□□ -0.59
CNKSR3-202ENST00000433165 ARHGAP35Q9NRY4 1499 aa11.37□□□□□ -0.59
CNKSR3-202ENST00000433165 CFAP74Q9C0B2 1584 aa11.36□□□□□ -0.59
CNKSR3-202ENST00000433165 YTHDC1Q96MU7 727 aaKnown RBP11.36□□□□□ -0.59
CNKSR3-202ENST00000433165 CDK11AQ9UQ88 783 aaPredicted RBP11.36□□□□□ -0.59
CNKSR3-202ENST00000433165 ANP32EQ9BTT0 268 aa11.36□□□□□ -0.59
CNKSR3-202ENST00000433165 KCNH8Q96L42 1107 aa11.35□□□□□ -0.59
CNKSR3-202ENST00000433165 NEO1Q92859 1461 aa11.34□□□□□ -0.59
CNKSR3-202ENST00000433165 MIER1Q8N108 512 aa11.34□□□□□ -0.59
CNKSR3-202ENST00000433165 CCDC18Q5T9S5 1454 aa11.33□□□□□ -0.6
CNKSR3-202ENST00000433165 ARAP3Q8WWN8 1544 aa11.32□□□□□ -0.6
CNKSR3-202ENST00000433165 AEBP2Q6ZN18 517 aaPredicted RBP11.32□□□□□ -0.6
CNKSR3-202ENST00000433165 CLIP1P30622 1438 aa11.31□□□□□ -0.6
CNKSR3-202ENST00000433165 CASKIN1Q8WXD9 1431 aa11.3□□□□□ -0.6
CNKSR3-202ENST00000433165 FYCO1Q9BQS8 1478 aa11.3□□□□□ -0.6
CNKSR3-202ENST00000433165 ARID3CA6NKF2 412 aa11.29□□□□□ -0.6
CNKSR3-202ENST00000433165 KIF14Q15058 1648 aa11.29□□□□□ -0.6
CNKSR3-202ENST00000433165 EHMT2Q96KQ7 1210 aa11.28□□□□□ -0.6
CNKSR3-202ENST00000433165 CDK13Q14004 1512 aaKnown RBP11.27□□□□□ -0.61
CNKSR3-202ENST00000433165 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms