RNA–Protein interactions for RNA: ENST00000433066.1

SMPD4P1-202, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 3

Gene SMPD4P1, Length 483 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-202ENST00000433066 DIP2BQ9P265 1576 aa13.48□□□□□ -0.25
SMPD4P1-202ENST00000433066 WRNQ14191 1432 aaPredicted RBP eCLIP13.44□□□□□ -0.26
SMPD4P1-202ENST00000433066 KDM6BO15054 1643 aa13.43□□□□□ -0.26
SMPD4P1-202ENST00000433066 JPH4Q96JJ6 628 aa13.43□□□□□ -0.26
SMPD4P1-202ENST00000433066 ERICH3Q5RHP9 1530 aa13.43□□□□□ -0.26
SMPD4P1-202ENST00000433066 ADCY10Q96PN6 1610 aa13.42□□□□□ -0.26
SMPD4P1-202ENST00000433066 RUSC2Q8N2Y8 1516 aa13.39□□□□□ -0.27
SMPD4P1-202ENST00000433066 BIVM-ERCC5R4GMW8 1640 aa13.36□□□□□ -0.27
SMPD4P1-202ENST00000433066 TOP2BQ02880 1626 aa13.35□□□□□ -0.27
SMPD4P1-202ENST00000433066 NPM1P06748 294 aaKnown RBP eCLIP13.35□□□□□ -0.27
SMPD4P1-202ENST00000433066 ADGRL1O94910 1474 aa13.33□□□□□ -0.28
SMPD4P1-202ENST00000433066 TSPOAP1O95153 1857 aa13.29□□□□□ -0.28
SMPD4P1-202ENST00000433066 HECW2Q9P2P5 1572 aa13.28□□□□□ -0.28
SMPD4P1-202ENST00000433066 PPRC1Q5VV67 1664 aaKnown RBP13.28□□□□□ -0.28
SMPD4P1-202ENST00000433066 KIAA0586Q9BVV6 1533 aa13.26□□□□□ -0.29
SMPD4P1-202ENST00000433066 COL17A1Q9UMD9 1497 aaPredicted RBP13.26□□□□□ -0.29
SMPD4P1-202ENST00000433066 GLI2P10070 1586 aa13.25□□□□□ -0.29
SMPD4P1-202ENST00000433066 ABCC2Q92887 1545 aa13.22□□□□□ -0.29
SMPD4P1-202ENST00000433066 ASXL2Q76L83 1435 aa13.22□□□□□ -0.29
SMPD4P1-202ENST00000433066 PTPRGP23470 1445 aa13.2□□□□□ -0.3
SMPD4P1-202ENST00000433066 PLB1Q6P1J6 1458 aa13.19□□□□□ -0.3
SMPD4P1-202ENST00000433066 IGF1RP08069 1367 aa13.17□□□□□ -0.3
SMPD4P1-202ENST00000433066 UHRF1BP1LA0JNW5 1464 aa13.16□□□□□ -0.3
SMPD4P1-202ENST00000433066 TNIKQ9UKE5 1360 aa13.15□□□□□ -0.3
SMPD4P1-202ENST00000433066 EPRSP07814 1512 aaKnown RBP13.14□□□□□ -0.31
SMPD4P1-202ENST00000433066 MAP3K4Q9Y6R4 1608 aa13.14□□□□□ -0.31
SMPD4P1-202ENST00000433066 FBXO41Q8TF61 875 aa13.14□□□□□ -0.31
SMPD4P1-202ENST00000433066 UACAQ9BZF9 1416 aa13.11□□□□□ -0.31
SMPD4P1-202ENST00000433066 TEX14Q8IWB6 1497 aa13.1□□□□□ -0.31
SMPD4P1-202ENST00000433066 KDM5BQ9UGL1 1544 aa13.1□□□□□ -0.31
SMPD4P1-202ENST00000433066 CUL7Q14999 1698 aa13.1□□□□□ -0.31
SMPD4P1-202ENST00000433066 CARMIL2Q6F5E8 1435 aa13.09□□□□□ -0.31
SMPD4P1-202ENST00000433066 TTBK1Q5TCY1 1321 aaPredicted RBP13.08□□□□□ -0.32
SMPD4P1-202ENST00000433066 DISP1Q96F81 1524 aa13.08□□□□□ -0.32
SMPD4P1-202ENST00000433066 KIF27Q86VH2 1401 aa13.06□□□□□ -0.32
SMPD4P1-202ENST00000433066 SUPT5HO00267 1087 aaKnown RBP13.04□□□□□ -0.32
SMPD4P1-202ENST00000433066 IQGAP2Q13576 1575 aa13.03□□□□□ -0.32
SMPD4P1-202ENST00000433066 ZCCHC11Q5TAX3 1644 aaKnown RBP13.03□□□□□ -0.32
SMPD4P1-202ENST00000433066 CARMIL1Q5VZK9 1371 aa13.03□□□□□ -0.32
SMPD4P1-202ENST00000433066 MAGI3Q5TCQ9 1506 aa13.01□□□□□ -0.33
SMPD4P1-202ENST00000433066 WDR7Q9Y4E6 1490 aa13□□□□□ -0.33
SMPD4P1-202ENST00000433066 UGGT2Q9NYU1 1516 aa12.98□□□□□ -0.33
SMPD4P1-202ENST00000433066 KIF21BO75037 1637 aa12.96□□□□□ -0.33
SMPD4P1-202ENST00000433066 CD109Q6YHK3 1445 aa12.96□□□□□ -0.34
SMPD4P1-202ENST00000433066 PTPRMP28827 1452 aa12.95□□□□□ -0.34
SMPD4P1-202ENST00000433066 KIAA0556O60303 1618 aa12.95□□□□□ -0.34
SMPD4P1-202ENST00000433066 ADAMTSL3P82987 1691 aa12.93□□□□□ -0.34
SMPD4P1-202ENST00000433066 CFAP43Q8NDM7 1665 aa12.92□□□□□ -0.34
SMPD4P1-202ENST00000433066 ARAP3Q8WWN8 1544 aa12.92□□□□□ -0.34
SMPD4P1-202ENST00000433066 LMTK3Q96Q04 1460 aa12.91□□□□□ -0.34
SMPD4P1-202ENST00000433066 SENP3Q9H4L4 574 aaPredicted RBP12.89□□□□□ -0.35
SMPD4P1-202ENST00000433066 ABCA8O94911 1581 aa12.89□□□□□ -0.35
SMPD4P1-202ENST00000433066 PCF11O94913 1555 aaKnown RBP12.89□□□□□ -0.35
SMPD4P1-202ENST00000433066 RAPGEF2Q9Y4G8 1499 aa12.85□□□□□ -0.35
SMPD4P1-202ENST00000433066 KCNH8Q96L42 1107 aa12.85□□□□□ -0.35
SMPD4P1-202ENST00000433066 BCORL1Q5H9F3 1711 aa12.82□□□□□ -0.36
SMPD4P1-202ENST00000433066 MADDQ8WXG6 1647 aa12.82□□□□□ -0.36
SMPD4P1-202ENST00000433066 ILDR2Q71H61 639 aa12.82□□□□□ -0.36
SMPD4P1-202ENST00000433066 FRMPD1Q5SYB0 1578 aa12.81□□□□□ -0.36
SMPD4P1-202ENST00000433066 PHLDB1Q86UU1 1377 aa12.81□□□□□ -0.36
SMPD4P1-202ENST00000433066 RAPGEF3O95398 923 aa12.79□□□□□ -0.36
SMPD4P1-202ENST00000433066 ABCA9Q8IUA7 1624 aa12.78□□□□□ -0.36
SMPD4P1-202ENST00000433066 SOCS7O14512 581 aa12.78□□□□□ -0.36
SMPD4P1-202ENST00000433066 CERKQ8TCT0 537 aa12.78□□□□□ -0.36
SMPD4P1-202ENST00000433066 GOLGA3Q08378 1498 aa12.78□□□□□ -0.36
SMPD4P1-202ENST00000433066 ATP10BO94823 1461 aa12.77□□□□□ -0.37
SMPD4P1-202ENST00000433066 HSPA2P54652 639 aa12.76□□□□□ -0.37
SMPD4P1-202ENST00000433066 PHF23Q9BUL5 403 aaPredicted RBP12.76□□□□□ -0.37
SMPD4P1-202ENST00000433066 NEO1Q92859 1461 aa12.76□□□□□ -0.37
SMPD4P1-202ENST00000433066 ARHGEF40Q8TER5 1519 aa12.73□□□□□ -0.37
SMPD4P1-202ENST00000433066 RIMS1Q86UR5 1692 aaKnown RBP12.73□□□□□ -0.37
SMPD4P1-202ENST00000433066 DISP3Q9P2K9 1392 aa12.72□□□□□ -0.37
SMPD4P1-202ENST00000433066 CTTNBP2Q8WZ74 1663 aa12.72□□□□□ -0.37
SMPD4P1-202ENST00000433066 ARID4BQ4LE39 1312 aaPredicted RBP12.71□□□□□ -0.37
SMPD4P1-202ENST00000433066 ARID3CA6NKF2 412 aa12.69□□□□□ -0.38
SMPD4P1-202ENST00000433066 SIGLEC1Q9BZZ2 1709 aa12.68□□□□□ -0.38
SMPD4P1-202ENST00000433066 FHOD3Q2V2M9 1422 aa12.68□□□□□ -0.38
SMPD4P1-202ENST00000433066 PRXQ9BXM0 1461 aa12.66□□□□□ -0.38
SMPD4P1-202ENST00000433066 RICTORQ6R327 1708 aa12.66□□□□□ -0.38
SMPD4P1-202ENST00000433066 DENND4BO75064 1496 aaPredicted RBP12.65□□□□□ -0.38
SMPD4P1-202ENST00000433066 ZMYM4Q5VZL5 1548 aa12.65□□□□□ -0.38
SMPD4P1-202ENST00000433066 TTC37Q6PGP7 1564 aa12.64□□□□□ -0.39
SMPD4P1-202ENST00000433066 YEATS2Q9ULM3 1422 aa12.63□□□□□ -0.39
SMPD4P1-202ENST00000433066 FANCAO15360 1455 aa12.63□□□□□ -0.39
SMPD4P1-202ENST00000433066 SPATA31D1Q6ZQQ2 1576 aa12.63□□□□□ -0.39
SMPD4P1-202ENST00000433066 POGZQ7Z3K3 1410 aa12.62□□□□□ -0.39
SMPD4P1-202ENST00000433066 AKNAQ7Z591 1439 aa12.62□□□□□ -0.39
SMPD4P1-202ENST00000433066 NUP153P49790 1475 aaKnown RBP12.61□□□□□ -0.39
SMPD4P1-202ENST00000433066 ZFYVE16Q7Z3T8 1539 aa12.61□□□□□ -0.39
SMPD4P1-202ENST00000433066 RAPGEF6Q8TEU7 1601 aa12.6□□□□□ -0.39
SMPD4P1-202ENST00000433066 PLPPR3Q6T4P5 718 aa12.6□□□□□ -0.39
SMPD4P1-202ENST00000433066 P3H3Q8IVL6 736 aa12.6□□□□□ -0.39
SMPD4P1-202ENST00000433066 SAMD9Q5K651 1589 aa12.6□□□□□ -0.39
SMPD4P1-202ENST00000433066 EFCAB5A4FU69 1503 aa12.59□□□□□ -0.39
SMPD4P1-202ENST00000433066 ARHGEF12Q9NZN5 1544 aa12.59□□□□□ -0.39
SMPD4P1-202ENST00000433066 MAGI2Q86UL8 1455 aa12.59□□□□□ -0.39
SMPD4P1-202ENST00000433066 STRCQ7RTU9 1775 aa12.58□□□□□ -0.39
SMPD4P1-202ENST00000433066 FER1L4A9Z1Z3 1794 aa12.56□□□□□ -0.4
SMPD4P1-202ENST00000433066 PREX1Q8TCU6 1659 aa12.56□□□□□ -0.4
SMPD4P1-202ENST00000433066 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms