RNA–Protein interactions for RNA: ENST00000432641.2

SDHAF3-202, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHAF3, Length 2,060 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-202ENST00000432641 TIAM1Q13009 1591 aa30.75■■■□□ 2.51
SDHAF3-202ENST00000432641 RRBP1Q9P2E9 1410 aaKnown RBP30.73■■■□□ 2.51
SDHAF3-202ENST00000432641 KANK4Q5T7N3 995 aaPredicted RBP30.72■■■□□ 2.51
SDHAF3-202ENST00000432641 AQRO60306 1485 aaKnown RBP eCLIP30.69■■■□□ 2.5
SDHAF3-202ENST00000432641 PBRM1Q86U86 1689 aa30.68■■■□□ 2.5
SDHAF3-202ENST00000432641 WDR62O43379 1518 aa30.67■■■□□ 2.5
SDHAF3-202ENST00000432641 CFAP43Q8NDM7 1665 aa30.67■■■□□ 2.5
SDHAF3-202ENST00000432641 HNRNPUL2Q1KMD3 747 aaKnown RBP30.66■■■□□ 2.5
SDHAF3-202ENST00000432641 FYCO1Q9BQS8 1478 aa30.65■■■□□ 2.5
SDHAF3-202ENST00000432641 PCF11O94913 1555 aaKnown RBP30.63■■■□□ 2.49
SDHAF3-202ENST00000432641 IFT140Q96RY7 1462 aa30.61■■■□□ 2.49
SDHAF3-202ENST00000432641 SAMD9Q5K651 1589 aa30.6■■■□□ 2.49
SDHAF3-202ENST00000432641 FMN1Q68DA7 1419 aa30.6■■■□□ 2.49
SDHAF3-202ENST00000432641 LRRC9Q6ZRR7 1453 aa30.59■■■□□ 2.49
SDHAF3-202ENST00000432641 CASKIN1Q8WXD9 1431 aa30.59■■■□□ 2.49
SDHAF3-202ENST00000432641 FHOD3Q2V2M9 1422 aa30.57■■■□□ 2.48
SDHAF3-202ENST00000432641 ADAMTS12P58397 1594 aa30.55■■■□□ 2.48
SDHAF3-202ENST00000432641 GRIN2BQ13224 1484 aa30.55■■■□□ 2.48
SDHAF3-202ENST00000432641 CCNB3Q8WWL7 1395 aa30.55■■■□□ 2.48
SDHAF3-202ENST00000432641 P3H3Q8IVL6 736 aa30.46■■■□□ 2.47
SDHAF3-202ENST00000432641 THOC2Q8NI27 1593 aaKnown RBP30.45■■■□□ 2.46
SDHAF3-202ENST00000432641 SNAPC4Q5SXM2 1469 aa30.43■■■□□ 2.46
SDHAF3-202ENST00000432641 CLSPNQ9HAW4 1339 aa30.43■■■□□ 2.46
SDHAF3-202ENST00000432641 ERCC6Q03468 1493 aa30.42■■■□□ 2.46
SDHAF3-202ENST00000432641 IQGAP2Q13576 1575 aa30.39■■■□□ 2.46
SDHAF3-202ENST00000432641 ZNF608Q9ULD9 1512 aaPredicted RBP30.32■■■□□ 2.44
SDHAF3-202ENST00000432641 PHLDB1Q86UU1 1377 aa30.3■■■□□ 2.44
SDHAF3-202ENST00000432641 EIF4G3O43432 1585 aaKnown RBP30.3■■■□□ 2.44
SDHAF3-202ENST00000432641 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.29■■■□□ 2.441e-9■■■■■ 28.6
SDHAF3-202ENST00000432641 ATP1B4Q9UN42 357 aaPredicted RBP30.28■■■□□ 2.44
SDHAF3-202ENST00000432641 UGGT2Q9NYU1 1516 aa30.26■■■□□ 2.43
SDHAF3-202ENST00000432641 DHX57Q6P158 1386 aaKnown RBP30.24■■■□□ 2.43
SDHAF3-202ENST00000432641 CCDC18Q5T9S5 1454 aa30.23■■■□□ 2.43
SDHAF3-202ENST00000432641 MAGI1Q96QZ7 1491 aaPredicted RBP30.22■■■□□ 2.43
SDHAF3-202ENST00000432641 PELP1Q8IZL8 1130 aaKnown RBP30.21■■■□□ 2.43
SDHAF3-202ENST00000432641 KIAA0586Q9BVV6 1533 aa30.2■■■□□ 2.43
SDHAF3-202ENST00000432641 LRRIQ1Q96JM4 1722 aa30.2■■■□□ 2.42
SDHAF3-202ENST00000432641 HECW1Q76N89 1606 aa30.19■■■□□ 2.42
SDHAF3-202ENST00000432641 EHBP1L1Q8N3D4 1523 aa30.18■■■□□ 2.42
SDHAF3-202ENST00000432641 MTUS2Q5JR59 1369 aa30.18■■■□□ 2.42
SDHAF3-202ENST00000432641 GRIN2AQ12879 1464 aa30.17■■■□□ 2.42
SDHAF3-202ENST00000432641 SUPT6HQ7KZ85 1726 aaKnown RBP30.13■■■□□ 2.41
SDHAF3-202ENST00000432641 FGD6Q6ZV73 1430 aa30.09■■■□□ 2.41
SDHAF3-202ENST00000432641 SETD5Q9C0A6 1442 aa30.09■■■□□ 2.41
SDHAF3-202ENST00000432641 SYNJ2O15056 1496 aa30.08■■■□□ 2.41
SDHAF3-202ENST00000432641 KIAA0556O60303 1618 aa30.06■■■□□ 2.4
SDHAF3-202ENST00000432641 FAM50AQ14320 339 aaKnown RBP30.06■■■□□ 2.4
SDHAF3-202ENST00000432641 RAB3GAP2Q9H2M9 1393 aa30.06■■■□□ 2.4
SDHAF3-202ENST00000432641 ITGAEP38570 1179 aa30.05■■■□□ 2.4
SDHAF3-202ENST00000432641 ZNF316A6NFI3 1004 aaPredicted RBP30.05■■■□□ 2.4
SDHAF3-202ENST00000432641 NCOA2Q15596 1464 aa30.04■■■□□ 2.4
SDHAF3-202ENST00000432641 ARHGEF11O15085 1522 aa30.02■■■□□ 2.4
SDHAF3-202ENST00000432641 MYOM3Q5VTT5 1437 aa30.01■■■□□ 2.4
SDHAF3-202ENST00000432641 EPRSP07814 1512 aaKnown RBP30.01■■■□□ 2.39
SDHAF3-202ENST00000432641 DISP1Q96F81 1524 aa30■■■□□ 2.39
SDHAF3-202ENST00000432641 DIEXFQ68CQ4 756 aaKnown RBP29.97■■■□□ 2.39
SDHAF3-202ENST00000432641 CHMP7Q8WUX9 453 aaPredicted RBP29.93■■■□□ 2.38
SDHAF3-202ENST00000432641 CEP170Q5SW79 1584 aa29.93■■■□□ 2.38
SDHAF3-202ENST00000432641 MAGI3Q5TCQ9 1506 aa29.92■■■□□ 2.38
SDHAF3-202ENST00000432641 NUP160Q12769 1436 aa29.91■■■□□ 2.38
SDHAF3-202ENST00000432641 RAPGEF6Q8TEU7 1601 aa29.88■■■□□ 2.37
SDHAF3-202ENST00000432641 PTPN23Q9H3S7 1636 aa29.87■■■□□ 2.37
SDHAF3-202ENST00000432641 TCOF1Q13428 1488 aaKnown RBP29.85■■■□□ 2.37
SDHAF3-202ENST00000432641 MAPKBP1O60336 1514 aa29.84■■■□□ 2.37
SDHAF3-202ENST00000432641 CDK13Q14004 1512 aaKnown RBP29.83■■■□□ 2.37
SDHAF3-202ENST00000432641 MIA2Q96PC5 1412 aa29.83■■■□□ 2.37
SDHAF3-202ENST00000432641 CARMIL2Q6F5E8 1435 aa29.82■■■□□ 2.36
SDHAF3-202ENST00000432641 HFM1A2PYH4 1435 aa29.81■■■□□ 2.36
SDHAF3-202ENST00000432641 NUP153P49790 1475 aaKnown RBP29.78■■■□□ 2.36
SDHAF3-202ENST00000432641 CDK11AQ9UQ88 783 aaPredicted RBP29.74■■■□□ 2.35
SDHAF3-202ENST00000432641 PTPRKQ15262 1439 aa29.7■■■□□ 2.35
SDHAF3-202ENST00000432641 AKNAQ7Z591 1439 aa29.7■■■□□ 2.35
SDHAF3-202ENST00000432641 FBLN2P98095 1184 aa29.7■■■□□ 2.35
SDHAF3-202ENST00000432641 SCAF1Q9H7N4 1312 aaKnown RBP29.7■■■□□ 2.34
SDHAF3-202ENST00000432641 TIMELESSQ9UNS1 1208 aa29.69■■■□□ 2.34
SDHAF3-202ENST00000432641 JPH4Q96JJ6 628 aa29.68■■■□□ 2.34
SDHAF3-202ENST00000432641 NAIPQ13075 1403 aa29.66■■■□□ 2.34
SDHAF3-202ENST00000432641 UACAQ9BZF9 1416 aa29.65■■■□□ 2.34
SDHAF3-202ENST00000432641 GCC2Q8IWJ2 1684 aa29.64■■■□□ 2.34
SDHAF3-202ENST00000432641 TROQ12816 1431 aaPredicted RBP29.61■■■□□ 2.33
SDHAF3-202ENST00000432641 ACIN1Q9UKV3 1341 aaKnown RBP29.6■■■□□ 2.33
SDHAF3-202ENST00000432641 ADCY10Q96PN6 1610 aa29.6■■■□□ 2.33
SDHAF3-202ENST00000432641 PLB1Q6P1J6 1458 aa29.57■■■□□ 2.32
SDHAF3-202ENST00000432641 ABCA8O94911 1581 aa29.56■■■□□ 2.32
SDHAF3-202ENST00000432641 ITSN2Q9NZM3 1697 aa29.56■■■□□ 2.32
SDHAF3-202ENST00000432641 DNMT1P26358 1616 aaKnown RBP29.51■■■□□ 2.31
SDHAF3-202ENST00000432641 ARID3CA6NKF2 412 aa29.51■■■□□ 2.31
SDHAF3-202ENST00000432641 CHD1O14646 1710 aa29.5■■■□□ 2.31
SDHAF3-202ENST00000432641 ROCK1Q13464 1354 aa29.5■■■□□ 2.31
SDHAF3-202ENST00000432641 DAPK1P53355 1430 aa29.46■■■□□ 2.31
SDHAF3-202ENST00000432641 PRG4Q92954 1404 aaPredicted RBP29.45■■■□□ 2.31
SDHAF3-202ENST00000432641 SHROOM2Q13796 1616 aa29.42■■■□□ 2.3
SDHAF3-202ENST00000432641 SIN3AQ96ST3 1273 aa29.4■■■□□ 2.3
SDHAF3-202ENST00000432641 KIF14Q15058 1648 aa29.39■■■□□ 2.3
SDHAF3-202ENST00000432641 ABCC5O15440 1437 aa29.38■■■□□ 2.29
SDHAF3-202ENST00000432641 NEUROD1Q13562 356 aa29.38■■■□□ 2.29
SDHAF3-202ENST00000432641 GPATCH8Q9UKJ3 1502 aaKnown RBP29.37■■■□□ 2.29
SDHAF3-202ENST00000432641 CENPBP07199 599 aaPredicted RBP29.36■■■□□ 2.29
SDHAF3-202ENST00000432641 PTPRGP23470 1445 aa29.36■■■□□ 2.29
SDHAF3-202ENST00000432641 ATP10BO94823 1461 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms