RNA–Protein interactions for RNA: ENST00000432213.1

SEC13-212, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-212ENST00000432213 CUL7Q14999 1698 aa25.19■■□□□ 1.62
SEC13-212ENST00000432213 ADCY10Q96PN6 1610 aa25.18■■□□□ 1.62
SEC13-212ENST00000432213 IGF1RP08069 1367 aa25.17■■□□□ 1.62
SEC13-212ENST00000432213 KIF27Q86VH2 1401 aa25.11■■□□□ 1.61
SEC13-212ENST00000432213 KIAA0586Q9BVV6 1533 aa25.09■■□□□ 1.61
SEC13-212ENST00000432213 DIP2BQ9P265 1576 aa25.05■■□□□ 1.6
SEC13-212ENST00000432213 MAPKBP1O60336 1514 aa25.03■■□□□ 1.6
SEC13-212ENST00000432213 ABCC10Q5T3U5 1492 aa24.99■■□□□ 1.59
SEC13-212ENST00000432213 CARMIL1Q5VZK9 1371 aa24.96■■□□□ 1.59
SEC13-212ENST00000432213 TSPOAP1O95153 1857 aa24.95■■□□□ 1.58
SEC13-212ENST00000432213 IQGAP2Q13576 1575 aa24.93■■□□□ 1.58
SEC13-212ENST00000432213 FAM69CQ0P6D2 419 aa24.9■■□□□ 1.58
SEC13-212ENST00000432213 AEBP2Q6ZN18 517 aaPredicted RBP24.86■■□□□ 1.57
SEC13-212ENST00000432213 DISP1Q96F81 1524 aa24.85■■□□□ 1.57
SEC13-212ENST00000432213 TTBK1Q5TCY1 1321 aaPredicted RBP24.85■■□□□ 1.57
SEC13-212ENST00000432213 PTPRGP23470 1445 aa24.83■■□□□ 1.57
SEC13-212ENST00000432213 PPRC1Q5VV67 1664 aaKnown RBP24.81■■□□□ 1.56
SEC13-212ENST00000432213 NPM1P06748 294 aaKnown RBP eCLIP24.8■■□□□ 1.56
SEC13-212ENST00000432213 KDM6BO15054 1643 aa24.79■■□□□ 1.56
SEC13-212ENST00000432213 ABCC2Q92887 1545 aa24.78■■□□□ 1.56
SEC13-212ENST00000432213 TNIKQ9UKE5 1360 aa24.78■■□□□ 1.56
SEC13-212ENST00000432213 RAPGEF2Q9Y4G8 1499 aa24.76■■□□□ 1.55
SEC13-212ENST00000432213 UGGT2Q9NYU1 1516 aa24.75■■□□□ 1.55
SEC13-212ENST00000432213 KIAA0556O60303 1618 aa24.75■■□□□ 1.55
SEC13-212ENST00000432213 CARMIL2Q6F5E8 1435 aa24.74■■□□□ 1.55
SEC13-212ENST00000432213 CTTNBP2Q8WZ74 1663 aa24.74■■□□□ 1.55
SEC13-212ENST00000432213 UHRF1BP1LA0JNW5 1464 aa24.71■■□□□ 1.55
SEC13-212ENST00000432213 ASXL2Q76L83 1435 aa24.71■■□□□ 1.55
SEC13-212ENST00000432213 ZCCHC11Q5TAX3 1644 aaKnown RBP24.7■■□□□ 1.54
SEC13-212ENST00000432213 UACAQ9BZF9 1416 aa24.68■■□□□ 1.54
SEC13-212ENST00000432213 GLI2P10070 1586 aa24.67■■□□□ 1.54
SEC13-212ENST00000432213 KDM5BQ9UGL1 1544 aa24.64■■□□□ 1.53
SEC13-212ENST00000432213 MAP3K4Q9Y6R4 1608 aa24.63■■□□□ 1.53
SEC13-212ENST00000432213 PLB1Q6P1J6 1458 aa24.6■■□□□ 1.53
SEC13-212ENST00000432213 EPRSP07814 1512 aaKnown RBP24.58■■□□□ 1.53
SEC13-212ENST00000432213 COL17A1Q9UMD9 1497 aaPredicted RBP24.56■■□□□ 1.52
SEC13-212ENST00000432213 KDM4FA0A1W2PPD8 638 aa24.55■■□□□ 1.52
SEC13-212ENST00000432213 PRXQ9BXM0 1461 aa24.53■■□□□ 1.52
SEC13-212ENST00000432213 ABCA8O94911 1581 aa24.51■■□□□ 1.51
SEC13-212ENST00000432213 WDR7Q9Y4E6 1490 aa24.45■■□□□ 1.5
SEC13-212ENST00000432213 GOLGA3Q08378 1498 aa24.4■■□□□ 1.5
SEC13-212ENST00000432213 CFAP43Q8NDM7 1665 aa24.37■■□□□ 1.49
SEC13-212ENST00000432213 ADGRL1O94910 1474 aa24.37■■□□□ 1.49
SEC13-212ENST00000432213 SAMD9Q5K651 1589 aa24.34■■□□□ 1.49
SEC13-212ENST00000432213 TEX14Q8IWB6 1497 aa24.34■■□□□ 1.49
SEC13-212ENST00000432213 ARID3CA6NKF2 412 aa24.29■■□□□ 1.48
SEC13-212ENST00000432213 P3H3Q8IVL6 736 aa24.29■■□□□ 1.48
SEC13-212ENST00000432213 MAGI3Q5TCQ9 1506 aa24.27■■□□□ 1.48
SEC13-212ENST00000432213 KCNH8Q96L42 1107 aa24.26■■□□□ 1.47
SEC13-212ENST00000432213 CD109Q6YHK3 1445 aa24.26■■□□□ 1.47
SEC13-212ENST00000432213 ATP10BO94823 1461 aa24.26■■□□□ 1.47
SEC13-212ENST00000432213 RAPGEF6Q8TEU7 1601 aa24.23■■□□□ 1.47
SEC13-212ENST00000432213 KIF21BO75037 1637 aa24.21■■□□□ 1.47
SEC13-212ENST00000432213 CSRNP3Q8WYN3 585 aa24.19■■□□□ 1.46
SEC13-212ENST00000432213 ABCA9Q8IUA7 1624 aa24.19■■□□□ 1.46
SEC13-212ENST00000432213 NUP153P49790 1475 aaKnown RBP24.13■■□□□ 1.45
SEC13-212ENST00000432213 FHOD3Q2V2M9 1422 aa24.13■■□□□ 1.45
SEC13-212ENST00000432213 HECW2Q9P2P5 1572 aa24.11■■□□□ 1.45
SEC13-212ENST00000432213 RANGAP1P46060 587 aaPredicted RBP24.1■■□□□ 1.45
SEC13-212ENST00000432213 ARAP3Q8WWN8 1544 aa24.1■■□□□ 1.45
SEC13-212ENST00000432213 FRMPD1Q5SYB0 1578 aa24.09■■□□□ 1.45
SEC13-212ENST00000432213 FAM9AQ8IZU1 332 aaPredicted RBP24.08■■□□□ 1.45
SEC13-212ENST00000432213 EEA1Q15075 1411 aa24.05■■□□□ 1.44
SEC13-212ENST00000432213 TTC37Q6PGP7 1564 aa23.98■■□□□ 1.43
SEC13-212ENST00000432213 ADAMTSL3P82987 1691 aa23.97■■□□□ 1.43
SEC13-212ENST00000432213 RICTORQ6R327 1708 aa23.96■■□□□ 1.43
SEC13-212ENST00000432213 EFCAB5A4FU69 1503 aa23.95■■□□□ 1.43
SEC13-212ENST00000432213 RAPGEF3O95398 923 aa23.95■■□□□ 1.42
SEC13-212ENST00000432213 CDK13Q14004 1512 aaKnown RBP23.94■■□□□ 1.42
SEC13-212ENST00000432213 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.94■■□□□ 1.424e-7■■■■□ 22.2
SEC13-212ENST00000432213 NEO1Q92859 1461 aa23.94■■□□□ 1.42
SEC13-212ENST00000432213 SIGLEC1Q9BZZ2 1709 aa23.94■■□□□ 1.42
SEC13-212ENST00000432213 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.92■■□□□ 1.42
SEC13-212ENST00000432213 HNRNPUL2Q1KMD3 747 aaKnown RBP23.92■■□□□ 1.42
SEC13-212ENST00000432213 BCORL1Q5H9F3 1711 aa23.91■■□□□ 1.42
SEC13-212ENST00000432213 EHMT2Q96KQ7 1210 aa23.91■■□□□ 1.42
SEC13-212ENST00000432213 LRRIQ1Q96JM4 1722 aa23.89■■□□□ 1.41
SEC13-212ENST00000432213 MADDQ8WXG6 1647 aa23.88■■□□□ 1.41
SEC13-212ENST00000432213 ARHGEF40Q8TER5 1519 aa23.87■■□□□ 1.41
SEC13-212ENST00000432213 PHLDB1Q86UU1 1377 aa23.85■■□□□ 1.41
SEC13-212ENST00000432213 ILDR1Q86SU0 546 aaPredicted RBP23.84■■□□□ 1.41
SEC13-212ENST00000432213 PTPRMP28827 1452 aa23.82■■□□□ 1.4
SEC13-212ENST00000432213 ARHGAP35Q9NRY4 1499 aa23.82■■□□□ 1.4
SEC13-212ENST00000432213 CFAP74Q9C0B2 1584 aa23.82■■□□□ 1.4
SEC13-212ENST00000432213 FANCAO15360 1455 aa23.81■■□□□ 1.4
SEC13-212ENST00000432213 AKNAQ7Z591 1439 aa23.8■■□□□ 1.4
SEC13-212ENST00000432213 KIF14Q15058 1648 aa23.8■■□□□ 1.4
SEC13-212ENST00000432213 RIMS1Q86UR5 1692 aaKnown RBP23.79■■□□□ 1.4
SEC13-212ENST00000432213 DENND4BO75064 1496 aaPredicted RBP23.77■■□□□ 1.4
SEC13-212ENST00000432213 PLEKHD1A6NEE1 506 aa23.77■■□□□ 1.4
SEC13-212ENST00000432213 CHIC1Q5VXU3 224 aa23.77■■□□□ 1.4
SEC13-212ENST00000432213 ZMYM4Q5VZL5 1548 aa23.77■■□□□ 1.4
SEC13-212ENST00000432213 HECW1Q76N89 1606 aa23.77■■□□□ 1.4
SEC13-212ENST00000432213 YEATS2Q9ULM3 1422 aa23.75■■□□□ 1.39
SEC13-212ENST00000432213 MYO5CQ9NQX4 1742 aa23.74■■□□□ 1.39
SEC13-212ENST00000432213 ZFYVE16Q7Z3T8 1539 aa23.71■■□□□ 1.39
SEC13-212ENST00000432213 UBTFP17480 764 aaKnown RBP23.7■■□□□ 1.38
SEC13-212ENST00000432213 PLCH2O75038 1416 aa23.67■■□□□ 1.38
SEC13-212ENST00000432213 ARID4BQ4LE39 1312 aaPredicted RBP23.66■■□□□ 1.38
SEC13-212ENST00000432213 LMTK3Q96Q04 1460 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms