RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 KIF27Q86VH2 1401 aa24.87■■□□□ 1.57
SMARCE1-205ENST00000431889 TTBK1Q5TCY1 1321 aaPredicted RBP24.82■■□□□ 1.56
SMARCE1-205ENST00000431889 CUL7Q14999 1698 aa24.81■■□□□ 1.56
SMARCE1-205ENST00000431889 KIF13AQ9H1H9 1805 aa24.79■■□□□ 1.56
SMARCE1-205ENST00000431889 KIAA0586Q9BVV6 1533 aa24.76■■□□□ 1.55
SMARCE1-205ENST00000431889 CARMIL1Q5VZK9 1371 aa24.74■■□□□ 1.55
SMARCE1-205ENST00000431889 ADCY10Q96PN6 1610 aa24.73■■□□□ 1.55
SMARCE1-205ENST00000431889 NPM1P06748 294 aaKnown RBP eCLIP24.68■■□□□ 1.54
SMARCE1-205ENST00000431889 FAM69CQ0P6D2 419 aa24.67■■□□□ 1.54
SMARCE1-205ENST00000431889 AEBP2Q6ZN18 517 aaPredicted RBP24.64■■□□□ 1.54
SMARCE1-205ENST00000431889 ABCC10Q5T3U5 1492 aa24.59■■□□□ 1.53
SMARCE1-205ENST00000431889 PTPRGP23470 1445 aa24.58■■□□□ 1.52
SMARCE1-205ENST00000431889 IQGAP2Q13576 1575 aa24.57■■□□□ 1.52
SMARCE1-205ENST00000431889 TSPOAP1O95153 1857 aa24.57■■□□□ 1.52
SMARCE1-205ENST00000431889 MAPKBP1O60336 1514 aa24.57■■□□□ 1.52
SMARCE1-205ENST00000431889 DIP2BQ9P265 1576 aa24.57■■□□□ 1.52
SMARCE1-205ENST00000431889 CARMIL2Q6F5E8 1435 aa24.51■■□□□ 1.51
SMARCE1-205ENST00000431889 TNIKQ9UKE5 1360 aa24.51■■□□□ 1.51
SMARCE1-205ENST00000431889 RAPGEF2Q9Y4G8 1499 aa24.49■■□□□ 1.51
SMARCE1-205ENST00000431889 DISP1Q96F81 1524 aa24.48■■□□□ 1.51
SMARCE1-205ENST00000431889 ABCC2Q92887 1545 aa24.41■■□□□ 1.5
SMARCE1-205ENST00000431889 ASXL2Q76L83 1435 aa24.38■■□□□ 1.49
SMARCE1-205ENST00000431889 KDM6BO15054 1643 aa24.38■■□□□ 1.49
SMARCE1-205ENST00000431889 UACAQ9BZF9 1416 aa24.37■■□□□ 1.49
SMARCE1-205ENST00000431889 UGGT2Q9NYU1 1516 aa24.37■■□□□ 1.49
SMARCE1-205ENST00000431889 KIAA0556O60303 1618 aa24.37■■□□□ 1.49
SMARCE1-205ENST00000431889 CTTNBP2Q8WZ74 1663 aa24.35■■□□□ 1.49
SMARCE1-205ENST00000431889 UHRF1BP1LA0JNW5 1464 aa24.31■■□□□ 1.48
SMARCE1-205ENST00000431889 ZCCHC11Q5TAX3 1644 aaKnown RBP24.3■■□□□ 1.48
SMARCE1-205ENST00000431889 PPRC1Q5VV67 1664 aaKnown RBP24.28■■□□□ 1.48
SMARCE1-205ENST00000431889 PLB1Q6P1J6 1458 aa24.27■■□□□ 1.48
SMARCE1-205ENST00000431889 KDM5BQ9UGL1 1544 aa24.24■■□□□ 1.47
SMARCE1-205ENST00000431889 P3H3Q8IVL6 736 aa24.23■■□□□ 1.47
SMARCE1-205ENST00000431889 PRXQ9BXM0 1461 aa24.23■■□□□ 1.47
SMARCE1-205ENST00000431889 GLI2P10070 1586 aa24.21■■□□□ 1.47
SMARCE1-205ENST00000431889 ARID3CA6NKF2 412 aa24.21■■□□□ 1.47
SMARCE1-205ENST00000431889 EPRSP07814 1512 aaKnown RBP24.21■■□□□ 1.47
SMARCE1-205ENST00000431889 KDM4FA0A1W2PPD8 638 aa24.17■■□□□ 1.46
SMARCE1-205ENST00000431889 MAP3K4Q9Y6R4 1608 aa24.16■■□□□ 1.46
SMARCE1-205ENST00000431889 RANGAP1P46060 587 aaPredicted RBP24.16■■□□□ 1.46
SMARCE1-205ENST00000431889 KCNH8Q96L42 1107 aa24.15■■□□□ 1.46
SMARCE1-205ENST00000431889 GOLGA3Q08378 1498 aa24.14■■□□□ 1.46
SMARCE1-205ENST00000431889 FAM9AQ8IZU1 332 aaPredicted RBP24.14■■□□□ 1.45
SMARCE1-205ENST00000431889 COL17A1Q9UMD9 1497 aaPredicted RBP24.13■■□□□ 1.45
SMARCE1-205ENST00000431889 ABCA8O94911 1581 aa24.12■■□□□ 1.45
SMARCE1-205ENST00000431889 WDR7Q9Y4E6 1490 aa24.11■■□□□ 1.45
SMARCE1-205ENST00000431889 CSRNP3Q8WYN3 585 aa24.1■■□□□ 1.45
SMARCE1-205ENST00000431889 EHMT2Q96KQ7 1210 aa24.03■■□□□ 1.44
SMARCE1-205ENST00000431889 TEX14Q8IWB6 1497 aa24.01■■□□□ 1.43
SMARCE1-205ENST00000431889 CD109Q6YHK3 1445 aa23.99■■□□□ 1.43
SMARCE1-205ENST00000431889 ATP10BO94823 1461 aa23.96■■□□□ 1.43
SMARCE1-205ENST00000431889 ADGRL1O94910 1474 aa23.96■■□□□ 1.43
SMARCE1-205ENST00000431889 SAMD9Q5K651 1589 aa23.95■■□□□ 1.42
SMARCE1-205ENST00000431889 CFAP43Q8NDM7 1665 aa23.95■■□□□ 1.42
SMARCE1-205ENST00000431889 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.93■■□□□ 1.42
SMARCE1-205ENST00000431889 HNRNPUL2Q1KMD3 747 aaKnown RBP23.93■■□□□ 1.42
SMARCE1-205ENST00000431889 FHOD3Q2V2M9 1422 aa23.9■■□□□ 1.42
SMARCE1-205ENST00000431889 RAPGEF6Q8TEU7 1601 aa23.9■■□□□ 1.42
SMARCE1-205ENST00000431889 MAGI3Q5TCQ9 1506 aa23.88■■□□□ 1.41
SMARCE1-205ENST00000431889 EEA1Q15075 1411 aa23.85■■□□□ 1.41
SMARCE1-205ENST00000431889 NUP153P49790 1475 aaKnown RBP23.81■■□□□ 1.4
SMARCE1-205ENST00000431889 KIF21BO75037 1637 aa23.79■■□□□ 1.4
SMARCE1-205ENST00000431889 ABCA9Q8IUA7 1624 aa23.78■■□□□ 1.4
SMARCE1-205ENST00000431889 RAPGEF3O95398 923 aa23.75■■□□□ 1.39
SMARCE1-205ENST00000431889 CHIC1Q5VXU3 224 aa23.74■■□□□ 1.39
SMARCE1-205ENST00000431889 UBTFP17480 764 aaKnown RBP23.73■■□□□ 1.39
SMARCE1-205ENST00000431889 ARAP3Q8WWN8 1544 aa23.7■■□□□ 1.38
SMARCE1-205ENST00000431889 ATP1B4Q9UN42 357 aaPredicted RBP23.69■■□□□ 1.38
SMARCE1-205ENST00000431889 CDK13Q14004 1512 aaKnown RBP23.67■■□□□ 1.38
SMARCE1-205ENST00000431889 PLEKHD1A6NEE1 506 aa23.66■■□□□ 1.38
SMARCE1-205ENST00000431889 EFCAB5A4FU69 1503 aa23.65■■□□□ 1.38
SMARCE1-205ENST00000431889 HECW2Q9P2P5 1572 aa23.64■■□□□ 1.37
SMARCE1-205ENST00000431889 FRMPD1Q5SYB0 1578 aa23.62■■□□□ 1.37
SMARCE1-205ENST00000431889 TTC37Q6PGP7 1564 aa23.61■■□□□ 1.37
SMARCE1-205ENST00000431889 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.61■■□□□ 1.37
SMARCE1-205ENST00000431889 NEO1Q92859 1461 aa23.6■■□□□ 1.37
SMARCE1-205ENST00000431889 ARHGAP35Q9NRY4 1499 aa23.57■■□□□ 1.36
SMARCE1-205ENST00000431889 ARID4BQ4LE39 1312 aaPredicted RBP23.56■■□□□ 1.36
SMARCE1-205ENST00000431889 PHLDB1Q86UU1 1377 aa23.55■■□□□ 1.36
SMARCE1-205ENST00000431889 FANCAO15360 1455 aa23.54■■□□□ 1.36
SMARCE1-205ENST00000431889 AKNAQ7Z591 1439 aa23.53■■□□□ 1.36
SMARCE1-205ENST00000431889 RICTORQ6R327 1708 aa23.52■■□□□ 1.36
SMARCE1-205ENST00000431889 DENND4BO75064 1496 aaPredicted RBP23.5■■□□□ 1.35
SMARCE1-205ENST00000431889 ADAMTSL3P82987 1691 aa23.49■■□□□ 1.35
SMARCE1-205ENST00000431889 PLPPR3Q6T4P5 718 aa23.48■■□□□ 1.35
SMARCE1-205ENST00000431889 HECW1Q76N89 1606 aa23.48■■□□□ 1.35
SMARCE1-205ENST00000431889 LRRIQ1Q96JM4 1722 aa23.48■■□□□ 1.35
SMARCE1-205ENST00000431889 BCORL1Q5H9F3 1711 aa23.46■■□□□ 1.35
SMARCE1-205ENST00000431889 CFAP74Q9C0B2 1584 aa23.46■■□□□ 1.35
SMARCE1-205ENST00000431889 KIF14Q15058 1648 aa23.46■■□□□ 1.35
SMARCE1-205ENST00000431889 MADDQ8WXG6 1647 aa23.46■■□□□ 1.35
SMARCE1-205ENST00000431889 FMN1Q68DA7 1419 aa23.45■■□□□ 1.35
SMARCE1-205ENST00000431889 ILDR1Q86SU0 546 aaPredicted RBP23.45■■□□□ 1.34
SMARCE1-205ENST00000431889 PTPRMP28827 1452 aa23.45■■□□□ 1.34
SMARCE1-205ENST00000431889 SIGLEC1Q9BZZ2 1709 aa23.44■■□□□ 1.34
SMARCE1-205ENST00000431889 ARHGEF40Q8TER5 1519 aa23.44■■□□□ 1.34
SMARCE1-205ENST00000431889 YEATS2Q9ULM3 1422 aa23.43■■□□□ 1.34
SMARCE1-205ENST00000431889 RIMS1Q86UR5 1692 aaKnown RBP23.4■■□□□ 1.34
SMARCE1-205ENST00000431889 PLCH2O75038 1416 aa23.4■■□□□ 1.34
SMARCE1-205ENST00000431889 MLECQ14165 292 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms