RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 KIAA0586Q9BVV6 1533 aa16.64■□□□□ 0.25
HDAC6-207ENST00000430858 ERCC6L2Q5T890 1561 aa16.64■□□□□ 0.25
HDAC6-207ENST00000430858 PRG4Q92954 1404 aaPredicted RBP16.63■□□□□ 0.25
HDAC6-207ENST00000430858 RAPGEF2Q9Y4G8 1499 aa16.59■□□□□ 0.25
HDAC6-207ENST00000430858 TRHP20396 242 aaPredicted RBP16.51■□□□□ 0.23
HDAC6-207ENST00000430858 PRXQ9BXM0 1461 aa16.5■□□□□ 0.23
HDAC6-207ENST00000430858 IQGAP2Q13576 1575 aa16.5■□□□□ 0.23
HDAC6-207ENST00000430858 EEA1Q15075 1411 aa16.48■□□□□ 0.23
HDAC6-207ENST00000430858 CARMIL2Q6F5E8 1435 aa16.48■□□□□ 0.23
HDAC6-207ENST00000430858 CSRNP3Q8WYN3 585 aa16.48■□□□□ 0.23
HDAC6-207ENST00000430858 TNIKQ9UKE5 1360 aa16.44■□□□□ 0.22
HDAC6-207ENST00000430858 CHIC1Q5VXU3 224 aa16.44■□□□□ 0.22
HDAC6-207ENST00000430858 PTPRGP23470 1445 aa16.43■□□□□ 0.22
HDAC6-207ENST00000430858 UGGT2Q9NYU1 1516 aa16.42■□□□□ 0.22
HDAC6-207ENST00000430858 DISP1Q96F81 1524 aa16.4■□□□□ 0.22
HDAC6-207ENST00000430858 NPM1P06748 294 aaKnown RBP eCLIP16.4■□□□□ 0.22
HDAC6-207ENST00000430858 AEBP2Q6ZN18 517 aaPredicted RBP16.4■□□□□ 0.22
HDAC6-207ENST00000430858 TTBK1Q5TCY1 1321 aaPredicted RBP16.37■□□□□ 0.21
HDAC6-207ENST00000430858 FAM9AQ8IZU1 332 aaPredicted RBP16.36■□□□□ 0.21
HDAC6-207ENST00000430858 CTTNBP2Q8WZ74 1663 aa16.36■□□□□ 0.21
HDAC6-207ENST00000430858 ADCY10Q96PN6 1610 aa16.35■□□□□ 0.21
HDAC6-207ENST00000430858 GOLGA3Q08378 1498 aa16.34■□□□□ 0.21
HDAC6-207ENST00000430858 KIAA0556O60303 1618 aa16.34■□□□□ 0.21
HDAC6-207ENST00000430858 MAPKBP1O60336 1514 aa16.31■□□□□ 0.2
HDAC6-207ENST00000430858 UACAQ9BZF9 1416 aa16.31■□□□□ 0.2
HDAC6-207ENST00000430858 UHRF1BP1LA0JNW5 1464 aa16.3■□□□□ 0.2
HDAC6-207ENST00000430858 ABCC2Q92887 1545 aa16.29■□□□□ 0.2
HDAC6-207ENST00000430858 ABCC10Q5T3U5 1492 aa16.26■□□□□ 0.19
HDAC6-207ENST00000430858 KIF21BO75037 1637 aa16.26■□□□□ 0.19
HDAC6-207ENST00000430858 FAM69CQ0P6D2 419 aa16.24■□□□□ 0.19
HDAC6-207ENST00000430858 KDM5BQ9UGL1 1544 aa16.21■□□□□ 0.19
HDAC6-207ENST00000430858 PLB1Q6P1J6 1458 aa16.21■□□□□ 0.19
HDAC6-207ENST00000430858 P3H3Q8IVL6 736 aa16.2■□□□□ 0.18
HDAC6-207ENST00000430858 ASXL2Q76L83 1435 aa16.19■□□□□ 0.18
HDAC6-207ENST00000430858 DIP2BQ9P265 1576 aa16.19■□□□□ 0.18
HDAC6-207ENST00000430858 KIF13AQ9H1H9 1805 aa16.19■□□□□ 0.18
HDAC6-207ENST00000430858 SAMD9Q5K651 1589 aa16.18■□□□□ 0.18
HDAC6-207ENST00000430858 ABCA8O94911 1581 aa16.17■□□□□ 0.18
HDAC6-207ENST00000430858 UBTFP17480 764 aaKnown RBP16.17■□□□□ 0.18
HDAC6-207ENST00000430858 RANGAP1P46060 587 aaPredicted RBP16.16■□□□□ 0.18
HDAC6-207ENST00000430858 EHMT2Q96KQ7 1210 aa16.14■□□□□ 0.17
HDAC6-207ENST00000430858 ZCCHC11Q5TAX3 1644 aaKnown RBP16.14■□□□□ 0.17
HDAC6-207ENST00000430858 EFCAB5A4FU69 1503 aa16.11■□□□□ 0.17
HDAC6-207ENST00000430858 FHOD3Q2V2M9 1422 aa16.11■□□□□ 0.17
HDAC6-207ENST00000430858 GLI2P10070 1586 aa16.1■□□□□ 0.17
HDAC6-207ENST00000430858 WDR7Q9Y4E6 1490 aa16.1■□□□□ 0.17
HDAC6-207ENST00000430858 EPRSP07814 1512 aaKnown RBP16.09■□□□□ 0.17
HDAC6-207ENST00000430858 ATP10BO94823 1461 aa16.06■□□□□ 0.16
HDAC6-207ENST00000430858 RAPGEF6Q8TEU7 1601 aa16.05■□□□□ 0.16
HDAC6-207ENST00000430858 ARID3CA6NKF2 412 aa16.05■□□□□ 0.16
HDAC6-207ENST00000430858 KCNH8Q96L42 1107 aa16.02■□□□□ 0.16
HDAC6-207ENST00000430858 NUP153P49790 1475 aaKnown RBP16.02■□□□□ 0.15
HDAC6-207ENST00000430858 ARHGAP35Q9NRY4 1499 aa16.01■□□□□ 0.15
HDAC6-207ENST00000430858 TSPOAP1O95153 1857 aa16.01■□□□□ 0.15
HDAC6-207ENST00000430858 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16■□□□□ 0.15
HDAC6-207ENST00000430858 HNRNPUL2Q1KMD3 747 aaKnown RBP16■□□□□ 0.15
HDAC6-207ENST00000430858 MAP3K4Q9Y6R4 1608 aa16■□□□□ 0.15
HDAC6-207ENST00000430858 FMN1Q68DA7 1419 aa15.99■□□□□ 0.15
HDAC6-207ENST00000430858 TEX14Q8IWB6 1497 aa15.98■□□□□ 0.15
HDAC6-207ENST00000430858 CD109Q6YHK3 1445 aa15.97■□□□□ 0.15
HDAC6-207ENST00000430858 KDM6BO15054 1643 aa15.97■□□□□ 0.15
HDAC6-207ENST00000430858 PPRC1Q5VV67 1664 aaKnown RBP15.96■□□□□ 0.15
HDAC6-207ENST00000430858 PLEKHD1A6NEE1 506 aa15.95■□□□□ 0.14
HDAC6-207ENST00000430858 MAGI3Q5TCQ9 1506 aa15.94■□□□□ 0.14
HDAC6-207ENST00000430858 CFAP43Q8NDM7 1665 aa15.93■□□□□ 0.14
HDAC6-207ENST00000430858 ATP1B4Q9UN42 357 aaPredicted RBP15.9■□□□□ 0.14
HDAC6-207ENST00000430858 CLIP1P30622 1438 aa15.89■□□□□ 0.13
HDAC6-207ENST00000430858 HECW1Q76N89 1606 aa15.89■□□□□ 0.13
HDAC6-207ENST00000430858 ABCA9Q8IUA7 1624 aa15.89■□□□□ 0.13
HDAC6-207ENST00000430858 COL17A1Q9UMD9 1497 aaPredicted RBP15.87■□□□□ 0.13
HDAC6-207ENST00000430858 CDK13Q14004 1512 aaKnown RBP15.87■□□□□ 0.13
HDAC6-207ENST00000430858 CDK11AQ9UQ88 783 aaPredicted RBP15.86■□□□□ 0.13
HDAC6-207ENST00000430858 PHLDB1Q86UU1 1377 aa15.85■□□□□ 0.13
HDAC6-207ENST00000430858 CASKIN1Q8WXD9 1431 aa15.84■□□□□ 0.13
HDAC6-207ENST00000430858 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.8■□□□□ 0.12
HDAC6-207ENST00000430858 ARAP3Q8WWN8 1544 aa15.8■□□□□ 0.12
HDAC6-207ENST00000430858 NEO1Q92859 1461 aa15.8■□□□□ 0.12
HDAC6-207ENST00000430858 PCF11O94913 1555 aaKnown RBP15.79■□□□□ 0.12
HDAC6-207ENST00000430858 CCDC18Q5T9S5 1454 aa15.79■□□□□ 0.12
HDAC6-207ENST00000430858 FYCO1Q9BQS8 1478 aa15.78■□□□□ 0.12
HDAC6-207ENST00000430858 TROQ12816 1431 aaPredicted RBP15.78■□□□□ 0.12
HDAC6-207ENST00000430858 CEP162Q5TB80 1403 aa15.78■□□□□ 0.12
HDAC6-207ENST00000430858 LOC105371045A0A1W2PR82 267 aa15.76■□□□□ 0.11
HDAC6-207ENST00000430858 TTC37Q6PGP7 1564 aa15.75■□□□□ 0.11
HDAC6-207ENST00000430858 FANCAO15360 1455 aa15.74■□□□□ 0.11
HDAC6-207ENST00000430858 PLCH2O75038 1416 aa15.74■□□□□ 0.11
HDAC6-207ENST00000430858 AKNAQ7Z591 1439 aa15.73■□□□□ 0.11
HDAC6-207ENST00000430858 LRRIQ1Q96JM4 1722 aa15.73■□□□□ 0.11
HDAC6-207ENST00000430858 KIF14Q15058 1648 aa15.72■□□□□ 0.11
HDAC6-207ENST00000430858 RAPGEF3O95398 923 aa15.72■□□□□ 0.11
HDAC6-207ENST00000430858 CFAP74Q9C0B2 1584 aa15.71■□□□□ 0.11
HDAC6-207ENST00000430858 DENND4BO75064 1496 aaPredicted RBP15.7■□□□□ 0.1
HDAC6-207ENST00000430858 KDM4FA0A1W2PPD8 638 aa15.69■□□□□ 0.1
HDAC6-207ENST00000430858 EFCAB2Q5VUJ9 269 aa15.69■□□□□ 0.1
HDAC6-207ENST00000430858 ADGRL1O94910 1474 aa15.65■□□□□ 0.1
HDAC6-207ENST00000430858 FRMPD1Q5SYB0 1578 aa15.65■□□□□ 0.1
HDAC6-207ENST00000430858 MYO5CQ9NQX4 1742 aa15.65■□□□□ 0.1
HDAC6-207ENST00000430858 SCAPERQ9BY12 1400 aa15.64■□□□□ 0.09
HDAC6-207ENST00000430858 ARHGAP5Q13017 1502 aa15.63■□□□□ 0.09
HDAC6-207ENST00000430858 MTUS2Q5JR59 1369 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms