RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 OSCARQ8IYS5 282 aa18.01■□□□□ 0.47
CHD4-202ENST00000430771 KIAA0586Q9BVV6 1533 aa18■□□□□ 0.47
CHD4-202ENST00000430771 SHROOM2Q13796 1616 aa17.96■□□□□ 0.47
CHD4-202ENST00000430771 UBTFP17480 764 aaKnown RBP17.91■□□□□ 0.46
CHD4-202ENST00000430771 UGGT2Q9NYU1 1516 aa17.89■□□□□ 0.45
CHD4-202ENST00000430771 EHMT2Q96KQ7 1210 aa17.89■□□□□ 0.45
CHD4-202ENST00000430771 DNAJC5Q9H3Z4 198 aa17.87■□□□□ 0.45
CHD4-202ENST00000430771 TNIKQ9UKE5 1360 aa17.87■□□□□ 0.45
CHD4-202ENST00000430771 EFCAB5A4FU69 1503 aa17.85■□□□□ 0.45
CHD4-202ENST00000430771 KIAA0556O60303 1618 aa17.84■□□□□ 0.45
CHD4-202ENST00000430771 SAMD9Q5K651 1589 aa17.83■□□□□ 0.45
CHD4-202ENST00000430771 CARMIL2Q6F5E8 1435 aa17.81■□□□□ 0.44
CHD4-202ENST00000430771 PRG4Q92954 1404 aaPredicted RBP17.81■□□□□ 0.44
CHD4-202ENST00000430771 JPH4Q96JJ6 628 aa17.81■□□□□ 0.44
CHD4-202ENST00000430771 ARHGEF11O15085 1522 aa17.81■□□□□ 0.44
CHD4-202ENST00000430771 RIMBP3CA6NJZ7 1639 aa17.79■□□□□ 0.44
CHD4-202ENST00000430771 RIMBP3BA6NNM3 1639 aa17.79■□□□□ 0.44
CHD4-202ENST00000430771 RIMBP3Q9UFD9 1639 aa17.79■□□□□ 0.44
CHD4-202ENST00000430771 DISP1Q96F81 1524 aa17.78■□□□□ 0.44
CHD4-202ENST00000430771 ERCC6L2Q5T890 1561 aa17.77■□□□□ 0.44
CHD4-202ENST00000430771 CEP162Q5TB80 1403 aa17.75■□□□□ 0.43
CHD4-202ENST00000430771 LOC105371045A0A1W2PR82 267 aa17.75■□□□□ 0.43
CHD4-202ENST00000430771 CLIP1P30622 1438 aa17.74■□□□□ 0.43
CHD4-202ENST00000430771 ARHGAP35Q9NRY4 1499 aa17.72■□□□□ 0.43
CHD4-202ENST00000430771 RANGAP1P46060 587 aaPredicted RBP17.7■□□□□ 0.42
CHD4-202ENST00000430771 FHOD3Q2V2M9 1422 aa17.68■□□□□ 0.42
CHD4-202ENST00000430771 ARAP1Q96P48 1450 aa17.68■□□□□ 0.42
CHD4-202ENST00000430771 PTPRGP23470 1445 aa17.64■□□□□ 0.41
CHD4-202ENST00000430771 FMN1Q68DA7 1419 aa17.64■□□□□ 0.41
CHD4-202ENST00000430771 P3H3Q8IVL6 736 aa17.6■□□□□ 0.41
CHD4-202ENST00000430771 RAPGEF6Q8TEU7 1601 aa17.6■□□□□ 0.41
CHD4-202ENST00000430771 ABCA8O94911 1581 aa17.58■□□□□ 0.41
CHD4-202ENST00000430771 ABCC2Q92887 1545 aa17.58■□□□□ 0.41
CHD4-202ENST00000430771 HECW1Q76N89 1606 aa17.58■□□□□ 0.4
CHD4-202ENST00000430771 PCF11O94913 1555 aaKnown RBP17.57■□□□□ 0.4
CHD4-202ENST00000430771 UACAQ9BZF9 1416 aa17.56■□□□□ 0.4
CHD4-202ENST00000430771 TTBK1Q5TCY1 1321 aaPredicted RBP17.56■□□□□ 0.4
CHD4-202ENST00000430771 UHRF1BP1LA0JNW5 1464 aa17.56■□□□□ 0.4
CHD4-202ENST00000430771 ADCY10Q96PN6 1610 aa17.55■□□□□ 0.4
CHD4-202ENST00000430771 PLB1Q6P1J6 1458 aa17.55■□□□□ 0.4
CHD4-202ENST00000430771 FYCO1Q9BQS8 1478 aa17.53■□□□□ 0.4
CHD4-202ENST00000430771 VPS8Q8N3P4 1428 aa17.53■□□□□ 0.4
CHD4-202ENST00000430771 CASKIN1Q8WXD9 1431 aa17.51■□□□□ 0.39
CHD4-202ENST00000430771 CYB5RLQ6IPT4 315 aa17.5■□□□□ 0.39
CHD4-202ENST00000430771 NUP153P49790 1475 aaKnown RBP17.48■□□□□ 0.39
CHD4-202ENST00000430771 CCDC18Q5T9S5 1454 aa17.47■□□□□ 0.39
CHD4-202ENST00000430771 ZCCHC11Q5TAX3 1644 aaKnown RBP17.47■□□□□ 0.39
CHD4-202ENST00000430771 KDM5BQ9UGL1 1544 aa17.46■□□□□ 0.39
CHD4-202ENST00000430771 LRRIQ1Q96JM4 1722 aa17.44■□□□□ 0.38
CHD4-202ENST00000430771 CFAP43Q8NDM7 1665 aa17.43■□□□□ 0.38
CHD4-202ENST00000430771 EPRSP07814 1512 aaKnown RBP17.42■□□□□ 0.38
CHD4-202ENST00000430771 MAPKBP1O60336 1514 aa17.4■□□□□ 0.38
CHD4-202ENST00000430771 CDK13Q14004 1512 aaKnown RBP17.39■□□□□ 0.37
CHD4-202ENST00000430771 NPM1P06748 294 aaKnown RBP eCLIP17.38■□□□□ 0.37
CHD4-202ENST00000430771 ATP10BO94823 1461 aa17.37■□□□□ 0.37
CHD4-202ENST00000430771 ATP1B4Q9UN42 357 aaPredicted RBP17.37■□□□□ 0.37
CHD4-202ENST00000430771 TIAM1Q13009 1591 aa17.36■□□□□ 0.37
CHD4-202ENST00000430771 MAP3K1Q13233 1512 aa17.35■□□□□ 0.37
CHD4-202ENST00000430771 EHBP1L1Q8N3D4 1523 aa17.32■□□□□ 0.36
CHD4-202ENST00000430771 WDR7Q9Y4E6 1490 aa17.32■□□□□ 0.36
CHD4-202ENST00000430771 ARID3CA6NKF2 412 aa17.32■□□□□ 0.36
CHD4-202ENST00000430771 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.32■□□□□ 0.36
CHD4-202ENST00000430771 HNRNPUL2Q1KMD3 747 aaKnown RBP17.32■□□□□ 0.36
CHD4-202ENST00000430771 ASXL2Q76L83 1435 aa17.31■□□□□ 0.36
CHD4-202ENST00000430771 APLP2Q06481 763 aa17.3■□□□□ 0.36
CHD4-202ENST00000430771 CDK11AQ9UQ88 783 aaPredicted RBP17.3■□□□□ 0.36
CHD4-202ENST00000430771 KIF14Q15058 1648 aa17.29■□□□□ 0.36
CHD4-202ENST00000430771 TROQ12816 1431 aaPredicted RBP17.27■□□□□ 0.35
CHD4-202ENST00000430771 DIP2BQ9P265 1576 aa17.26■□□□□ 0.35
CHD4-202ENST00000430771 MAGI3Q5TCQ9 1506 aa17.26■□□□□ 0.35
CHD4-202ENST00000430771 MTUS2Q5JR59 1369 aa17.25■□□□□ 0.35
CHD4-202ENST00000430771 PLEKHD1A6NEE1 506 aa17.24■□□□□ 0.35
CHD4-202ENST00000430771 SUPT6HQ7KZ85 1726 aaKnown RBP17.24■□□□□ 0.35
CHD4-202ENST00000430771 LRRC9Q6ZRR7 1453 aa17.24■□□□□ 0.35
CHD4-202ENST00000430771 ABCC10Q5T3U5 1492 aa17.22■□□□□ 0.35
CHD4-202ENST00000430771 GLI2P10070 1586 aa17.22■□□□□ 0.35
CHD4-202ENST00000430771 KIF13AQ9H1H9 1805 aa17.21■□□□□ 0.35
CHD4-202ENST00000430771 ABCA9Q8IUA7 1624 aa17.2■□□□□ 0.34
CHD4-202ENST00000430771 TTC37Q6PGP7 1564 aa17.18■□□□□ 0.34
CHD4-202ENST00000430771 MAP3K4Q9Y6R4 1608 aa17.17■□□□□ 0.34
CHD4-202ENST00000430771 ITSN2Q9NZM3 1697 aa17.16■□□□□ 0.34
CHD4-202ENST00000430771 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.16■□□□□ 0.34
CHD4-202ENST00000430771 MYO5CQ9NQX4 1742 aa17.16■□□□□ 0.34
CHD4-202ENST00000430771 NCOA2Q15596 1464 aa17.14■□□□□ 0.33
CHD4-202ENST00000430771 PREX2Q70Z35 1606 aa17.13■□□□□ 0.33
CHD4-202ENST00000430771 KCNH8Q96L42 1107 aa17.12■□□□□ 0.33
CHD4-202ENST00000430771 CDC42BPAQ5VT25 1732 aa17.11■□□□□ 0.33
CHD4-202ENST00000430771 KANK4Q5T7N3 995 aaPredicted RBP17.11■□□□□ 0.33
CHD4-202ENST00000430771 ARAP3Q8WWN8 1544 aa17.11■□□□□ 0.33
CHD4-202ENST00000430771 CFAP74Q9C0B2 1584 aa17.11■□□□□ 0.33
CHD4-202ENST00000430771 FAM69CQ0P6D2 419 aa17.09■□□□□ 0.33
CHD4-202ENST00000430771 TEX14Q8IWB6 1497 aa17.07■□□□□ 0.32
CHD4-202ENST00000430771 CD109Q6YHK3 1445 aa17.07■□□□□ 0.32
CHD4-202ENST00000430771 CCNB3Q8WWL7 1395 aa17.07■□□□□ 0.32
CHD4-202ENST00000430771 TSPOAP1O95153 1857 aa17.07■□□□□ 0.32
CHD4-202ENST00000430771 PPRC1Q5VV67 1664 aaKnown RBP17.07■□□□□ 0.32
CHD4-202ENST00000430771 TRHP20396 242 aaPredicted RBP17.06■□□□□ 0.32
CHD4-202ENST00000430771 CDC42BPBQ9Y5S2 1711 aa17.06■□□□□ 0.32
CHD4-202ENST00000430771 ARHGAP5Q13017 1502 aa17.06■□□□□ 0.32
CHD4-202ENST00000430771 GPATCH8Q9UKJ3 1502 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms