RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 PRG4Q92954 1404 aaPredicted RBP28.52■■■□□ 2.16
PTPRA-206ENST00000430705 JPH4Q96JJ6 628 aa28.45■■■□□ 2.14
PTPRA-206ENST00000430705 KIAA0586Q9BVV6 1533 aa28.41■■■□□ 2.14
PTPRA-206ENST00000430705 CARMIL1Q5VZK9 1371 aa28.32■■■□□ 2.12
PTPRA-206ENST00000430705 KIF13AQ9H1H9 1805 aa28.29■■■□□ 2.12
PTPRA-206ENST00000430705 ADCY10Q96PN6 1610 aa28.29■■■□□ 2.12
PTPRA-206ENST00000430705 IQGAP2Q13576 1575 aa28.2■■■□□ 2.11
PTPRA-206ENST00000430705 MAPKBP1O60336 1514 aa28.18■■■□□ 2.1
PTPRA-206ENST00000430705 RAPGEF2Q9Y4G8 1499 aa28.12■■■□□ 2.09
PTPRA-206ENST00000430705 DIP2BQ9P265 1576 aa28.11■■■□□ 2.09
PTPRA-206ENST00000430705 ABCC10Q5T3U5 1492 aa28.1■■■□□ 2.09
PTPRA-206ENST00000430705 DISP1Q96F81 1524 aa28.09■■■□□ 2.09
PTPRA-206ENST00000430705 PTPRGP23470 1445 aa28.05■■■□□ 2.08
PTPRA-206ENST00000430705 UGGT2Q9NYU1 1516 aa28.04■■■□□ 2.08
PTPRA-206ENST00000430705 TNIKQ9UKE5 1360 aa28.04■■■□□ 2.08
PTPRA-206ENST00000430705 CARMIL2Q6F5E8 1435 aa28.03■■■□□ 2.08
PTPRA-206ENST00000430705 CTTNBP2Q8WZ74 1663 aa27.99■■■□□ 2.07
PTPRA-206ENST00000430705 KIAA0556O60303 1618 aa27.99■■■□□ 2.07
PTPRA-206ENST00000430705 NPM1P06748 294 aaKnown RBP eCLIP27.97■■■□□ 2.07
PTPRA-206ENST00000430705 ABCC2Q92887 1545 aa27.97■■■□□ 2.07
PTPRA-206ENST00000430705 FAM69CQ0P6D2 419 aa27.95■■■□□ 2.06
PTPRA-206ENST00000430705 TTBK1Q5TCY1 1321 aaPredicted RBP27.94■■■□□ 2.06
PTPRA-206ENST00000430705 UHRF1BP1LA0JNW5 1464 aa27.94■■■□□ 2.06
PTPRA-206ENST00000430705 PRXQ9BXM0 1461 aa27.94■■■□□ 2.06
PTPRA-206ENST00000430705 UACAQ9BZF9 1416 aa27.89■■■□□ 2.06
PTPRA-206ENST00000430705 TSPOAP1O95153 1857 aa27.84■■■□□ 2.05
PTPRA-206ENST00000430705 ASXL2Q76L83 1435 aa27.84■■■□□ 2.05
PTPRA-206ENST00000430705 KDM5BQ9UGL1 1544 aa27.82■■■□□ 2.04
PTPRA-206ENST00000430705 ZCCHC11Q5TAX3 1644 aaKnown RBP27.81■■■□□ 2.04
PTPRA-206ENST00000430705 PPRC1Q5VV67 1664 aaKnown RBP27.81■■■□□ 2.04
PTPRA-206ENST00000430705 GLI2P10070 1586 aa27.79■■■□□ 2.04
PTPRA-206ENST00000430705 PLB1Q6P1J6 1458 aa27.78■■■□□ 2.04
PTPRA-206ENST00000430705 KDM6BO15054 1643 aa27.77■■■□□ 2.04
PTPRA-206ENST00000430705 GOLGA3Q08378 1498 aa27.72■■■□□ 2.03
PTPRA-206ENST00000430705 ABCA8O94911 1581 aa27.72■■■□□ 2.03
PTPRA-206ENST00000430705 EPRSP07814 1512 aaKnown RBP27.7■■■□□ 2.02
PTPRA-206ENST00000430705 MAP3K4Q9Y6R4 1608 aa27.69■■■□□ 2.02
PTPRA-206ENST00000430705 SAMD9Q5K651 1589 aa27.62■■■□□ 2.01
PTPRA-206ENST00000430705 WDR7Q9Y4E6 1490 aa27.6■■■□□ 2.01
PTPRA-206ENST00000430705 AEBP2Q6ZN18 517 aaPredicted RBP27.6■■■□□ 2.01
PTPRA-206ENST00000430705 CSRNP3Q8WYN3 585 aa27.6■■■□□ 2.01
PTPRA-206ENST00000430705 EEA1Q15075 1411 aa27.57■■■□□ 2
PTPRA-206ENST00000430705 COL17A1Q9UMD9 1497 aaPredicted RBP27.53■■■□□ 2
PTPRA-206ENST00000430705 CFAP43Q8NDM7 1665 aa27.46■■□□□ 1.99
PTPRA-206ENST00000430705 KIF21BO75037 1637 aa27.46■■□□□ 1.99
PTPRA-206ENST00000430705 P3H3Q8IVL6 736 aa27.46■■□□□ 1.99
PTPRA-206ENST00000430705 TEX14Q8IWB6 1497 aa27.45■■□□□ 1.99
PTPRA-206ENST00000430705 ATP10BO94823 1461 aa27.43■■□□□ 1.98
PTPRA-206ENST00000430705 RAPGEF6Q8TEU7 1601 aa27.42■■□□□ 1.98
PTPRA-206ENST00000430705 MAGI3Q5TCQ9 1506 aa27.4■■□□□ 1.98
PTPRA-206ENST00000430705 FAM9AQ8IZU1 332 aaPredicted RBP27.39■■□□□ 1.98
PTPRA-206ENST00000430705 KDM4FA0A1W2PPD8 638 aa27.38■■□□□ 1.97
PTPRA-206ENST00000430705 FHOD3Q2V2M9 1422 aa27.36■■□□□ 1.97
PTPRA-206ENST00000430705 ARID3CA6NKF2 412 aa27.36■■□□□ 1.97
PTPRA-206ENST00000430705 CD109Q6YHK3 1445 aa27.35■■□□□ 1.97
PTPRA-206ENST00000430705 NUP153P49790 1475 aaKnown RBP27.34■■□□□ 1.97
PTPRA-206ENST00000430705 KCNH8Q96L42 1107 aa27.32■■□□□ 1.96
PTPRA-206ENST00000430705 ABCA9Q8IUA7 1624 aa27.3■■□□□ 1.96
PTPRA-206ENST00000430705 EFCAB5A4FU69 1503 aa27.29■■□□□ 1.96
PTPRA-206ENST00000430705 CHIC1Q5VXU3 224 aa27.28■■□□□ 1.96
PTPRA-206ENST00000430705 RANGAP1P46060 587 aaPredicted RBP27.26■■□□□ 1.95
PTPRA-206ENST00000430705 ADGRL1O94910 1474 aa27.25■■□□□ 1.95
PTPRA-206ENST00000430705 ARAP3Q8WWN8 1544 aa27.17■■□□□ 1.94
PTPRA-206ENST00000430705 ARHGAP35Q9NRY4 1499 aa27.11■■□□□ 1.93
PTPRA-206ENST00000430705 EHMT2Q96KQ7 1210 aa27.1■■□□□ 1.93
PTPRA-206ENST00000430705 CDK13Q14004 1512 aaKnown RBP27.1■■□□□ 1.93
PTPRA-206ENST00000430705 FRMPD1Q5SYB0 1578 aa27.09■■□□□ 1.93
PTPRA-206ENST00000430705 NEO1Q92859 1461 aa27.07■■□□□ 1.92
PTPRA-206ENST00000430705 TTC37Q6PGP7 1564 aa27.07■■□□□ 1.92
PTPRA-206ENST00000430705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.07■■□□□ 1.92
PTPRA-206ENST00000430705 HNRNPUL2Q1KMD3 747 aaKnown RBP27.07■■□□□ 1.92
PTPRA-206ENST00000430705 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.06■■□□□ 1.92
PTPRA-206ENST00000430705 UBTFP17480 764 aaKnown RBP27.02■■□□□ 1.92
PTPRA-206ENST00000430705 PHLDB1Q86UU1 1377 aa27.01■■□□□ 1.91
PTPRA-206ENST00000430705 HECW1Q76N89 1606 aa27.01■■□□□ 1.91
PTPRA-206ENST00000430705 LRRIQ1Q96JM4 1722 aa26.98■■□□□ 1.91
PTPRA-206ENST00000430705 FMN1Q68DA7 1419 aa26.97■■□□□ 1.91
PTPRA-206ENST00000430705 RICTORQ6R327 1708 aa26.96■■□□□ 1.91
PTPRA-206ENST00000430705 PLEKHD1A6NEE1 506 aa26.95■■□□□ 1.9
PTPRA-206ENST00000430705 RAPGEF3O95398 923 aa26.95■■□□□ 1.9
PTPRA-206ENST00000430705 CFAP74Q9C0B2 1584 aa26.93■■□□□ 1.9
PTPRA-206ENST00000430705 FANCAO15360 1455 aa26.92■■□□□ 1.9
PTPRA-206ENST00000430705 KIF14Q15058 1648 aa26.89■■□□□ 1.9
PTPRA-206ENST00000430705 ARHGEF40Q8TER5 1519 aa26.89■■□□□ 1.89
PTPRA-206ENST00000430705 AKNAQ7Z591 1439 aa26.89■■□□□ 1.89
PTPRA-206ENST00000430705 ADAMTSL3P82987 1691 aa26.86■■□□□ 1.89
PTPRA-206ENST00000430705 PCF11O94913 1555 aaKnown RBP26.86■■□□□ 1.89
PTPRA-206ENST00000430705 DENND4BO75064 1496 aaPredicted RBP26.86■■□□□ 1.89
PTPRA-206ENST00000430705 HECW2Q9P2P5 1572 aa26.85■■□□□ 1.89
PTPRA-206ENST00000430705 ZMYM4Q5VZL5 1548 aa26.85■■□□□ 1.89
PTPRA-206ENST00000430705 BCORL1Q5H9F3 1711 aa26.82■■□□□ 1.88
PTPRA-206ENST00000430705 MYO5CQ9NQX4 1742 aa26.82■■□□□ 1.88
PTPRA-206ENST00000430705 PLCH2O75038 1416 aa26.82■■□□□ 1.88
PTPRA-206ENST00000430705 SIGLEC1Q9BZZ2 1709 aa26.81■■□□□ 1.88
PTPRA-206ENST00000430705 ATP1B4Q9UN42 357 aaPredicted RBP26.78■■□□□ 1.88
PTPRA-206ENST00000430705 TROQ12816 1431 aaPredicted RBP26.78■■□□□ 1.88
PTPRA-206ENST00000430705 MADDQ8WXG6 1647 aa26.76■■□□□ 1.87
PTPRA-206ENST00000430705 CASKIN1Q8WXD9 1431 aa26.75■■□□□ 1.87
PTPRA-206ENST00000430705 POGZQ7Z3K3 1410 aa26.74■■□□□ 1.87
PTPRA-206ENST00000430705 YEATS2Q9ULM3 1422 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms