RNA–Protein interactions for RNA: ENST00000430580.6

NBPF1-203, Transcript of NBPF member 1, humanhuman

APPRIS P5 TSL 5 BASIC

Gene NBPF1, Length 5,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF1-203ENST00000430580 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.55■□□□□ 0.41e-8■■□□□ 13.1
NBPF1-203ENST00000430580 ERCC6Q03468 1493 aa17.54■□□□□ 0.4
NBPF1-203ENST00000430580 HIRIP3Q9BW71 556 aaPredicted RBP17.54■□□□□ 0.4
NBPF1-203ENST00000430580 FAM9BQ8IZU0 186 aa17.54■□□□□ 0.4
NBPF1-203ENST00000430580 PLEKHD1A6NEE1 506 aa17.52■□□□□ 0.4
NBPF1-203ENST00000430580 EIF4G2P78344 907 aaKnown RBP eCLIP17.52■□□□□ 0.4
NBPF1-203ENST00000430580 NPM1P06748 294 aaKnown RBP eCLIP17.51■□□□□ 0.39
NBPF1-203ENST00000430580 RAPGEF2Q9Y4G8 1499 aa17.51■□□□□ 0.39
NBPF1-203ENST00000430580 RUSC2Q8N2Y8 1516 aa17.5■□□□□ 0.39
NBPF1-203ENST00000430580 ARHGAP35Q9NRY4 1499 aa17.49■□□□□ 0.39
NBPF1-203ENST00000430580 KANK4Q5T7N3 995 aaPredicted RBP17.49■□□□□ 0.39
NBPF1-203ENST00000430580 CADPSQ9ULU8 1353 aa17.49■□□□□ 0.39
NBPF1-203ENST00000430580 PDS5BQ9NTI5 1447 aa17.48■□□□□ 0.39
NBPF1-203ENST00000430580 CANXP27824 592 aaKnown RBP17.48■□□□□ 0.39
NBPF1-203ENST00000430580 KDM2AQ9Y2K7 1162 aa17.48■□□□□ 0.39
NBPF1-203ENST00000430580 CFDP1Q9UEE9 299 aaPredicted RBP17.47■□□□□ 0.39
NBPF1-203ENST00000430580 CHGAP10645 457 aaKnown RBP17.45■□□□□ 0.38
NBPF1-203ENST00000430580 SETD5Q9C0A6 1442 aa17.45■□□□□ 0.38
NBPF1-203ENST00000430580 SIN3AQ96ST3 1273 aa17.45■□□□□ 0.38
NBPF1-203ENST00000430580 MRS2Q9HD23 443 aa17.44■□□□□ 0.38
NBPF1-203ENST00000430580 TMC1Q8TDI8 760 aa17.42■□□□□ 0.38
NBPF1-203ENST00000430580 FMN1Q68DA7 1419 aa17.4■□□□□ 0.38
NBPF1-203ENST00000430580 NEFMP07197 916 aa17.39■□□□□ 0.37
NBPF1-203ENST00000430580 KCNH8Q96L42 1107 aa17.38■□□□□ 0.37
NBPF1-203ENST00000430580 TDRD9Q8NDG6 1382 aaKnown RBP17.35■□□□□ 0.37
NBPF1-203ENST00000430580 TIMELESSQ9UNS1 1208 aa17.35■□□□□ 0.37
NBPF1-203ENST00000430580 ANP32AP39687 249 aaKnown RBP17.34■□□□□ 0.37
NBPF1-203ENST00000430580 STAG3Q9UJ98 1225 aa17.33■□□□□ 0.36
NBPF1-203ENST00000430580 RAB3GAP2Q9H2M9 1393 aa17.33■□□□□ 0.36
NBPF1-203ENST00000430580 FANCD2Q9BXW9 1451 aa17.32■□□□□ 0.36
NBPF1-203ENST00000430580 ESF1Q9H501 851 aaKnown RBP17.32■□□□□ 0.36
NBPF1-203ENST00000430580 ZBTB47Q9UFB7 747 aaPredicted RBP17.3■□□□□ 0.36
NBPF1-203ENST00000430580 FHOD3Q2V2M9 1422 aa17.3■□□□□ 0.36
NBPF1-203ENST00000430580 SALL2Q9Y467 1007 aaPredicted RBP17.3■□□□□ 0.36
NBPF1-203ENST00000430580 WDR43Q15061 677 aaKnown RBP eCLIP17.28■□□□□ 0.36
NBPF1-203ENST00000430580 NCAPD3P42695 1498 aa17.26■□□□□ 0.35
NBPF1-203ENST00000430580 KIF21BO75037 1637 aa17.25■□□□□ 0.35
NBPF1-203ENST00000430580 RGL3Q3MIN7 710 aa17.24■□□□□ 0.35
NBPF1-203ENST00000430580 CARD11Q9BXL7 1154 aa17.24■□□□□ 0.35
NBPF1-203ENST00000430580 CCDC136Q96JN2 1154 aa17.24■□□□□ 0.35
NBPF1-203ENST00000430580 CARMIL2Q6F5E8 1435 aa17.23■□□□□ 0.35
NBPF1-203ENST00000430580 NPM2Q86SE8 214 aaKnown RBP17.23■□□□□ 0.35
NBPF1-203ENST00000430580 IRX6P78412 446 aaPredicted RBP17.22■□□□□ 0.35
NBPF1-203ENST00000430580 FGD5Q6ZNL6 1462 aa17.22■□□□□ 0.35
NBPF1-203ENST00000430580 SYNJ1O43426 1573 aa17.21■□□□□ 0.35
NBPF1-203ENST00000430580 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.2■□□□□ 0.34
NBPF1-203ENST00000430580 SLC24A1O60721 1099 aa17.16■□□□□ 0.34
NBPF1-203ENST00000430580 DHX57Q6P158 1386 aaKnown RBP17.15■□□□□ 0.34
NBPF1-203ENST00000430580 IGF1RP08069 1367 aa17.14■□□□□ 0.34
NBPF1-203ENST00000430580 ERICH3Q5RHP9 1530 aa17.14■□□□□ 0.33
NBPF1-203ENST00000430580 CDCA8Q53HL2 280 aa17.13■□□□□ 0.33
NBPF1-203ENST00000430580 CCER2I3L3R5 266 aa17.13■□□□□ 0.33
NBPF1-203ENST00000430580 CCDC18Q5T9S5 1454 aa17.13■□□□□ 0.33
NBPF1-203ENST00000430580 HSPA5P11021 654 aaKnown RBP17.12■□□□□ 0.33
NBPF1-203ENST00000430580 MPHOSPH9Q99550 1183 aa17.11■□□□□ 0.33
NBPF1-203ENST00000430580 TOP2BQ02880 1626 aa17.11■□□□□ 0.33
NBPF1-203ENST00000430580 BCL11AQ9H165 835 aa17.1■□□□□ 0.33
NBPF1-203ENST00000430580 SUPT16HQ9Y5B9 1047 aaKnown RBP17.1■□□□□ 0.33
NBPF1-203ENST00000430580 RAD54L2Q9Y4B4 1467 aa17.09■□□□□ 0.33
NBPF1-203ENST00000430580 HMGXB3Q12766 1538 aa17.09■□□□□ 0.33
NBPF1-203ENST00000430580 KNSTRNQ9Y448 316 aa17.08■□□□□ 0.33
NBPF1-203ENST00000430580 FOXD1Q16676 465 aa17.08■□□□□ 0.32
NBPF1-203ENST00000430580 CFTRP13569 1480 aa17.08■□□□□ 0.32
NBPF1-203ENST00000430580 DCAF11Q8TEB1 546 aa17.08■□□□□ 0.32
NBPF1-203ENST00000430580 ANKRD30AQ9BXX3 1397 aa17.07■□□□□ 0.32
NBPF1-203ENST00000430580 GAPVD1Q14C86 1478 aa17.07■□□□□ 0.32
NBPF1-203ENST00000430580 PKD2Q13563 968 aa17.06■□□□□ 0.32
NBPF1-203ENST00000430580 PPP1R15AO75807 674 aaPredicted RBP17.06■□□□□ 0.32
NBPF1-203ENST00000430580 PLPPR3Q6T4P5 718 aa17.04■□□□□ 0.32
NBPF1-203ENST00000430580 KANK1Q14678 1352 aa17.04■□□□□ 0.32
NBPF1-203ENST00000430580 UPF2Q9HAU5 1272 aaKnown RBP17.03■□□□□ 0.32
NBPF1-203ENST00000430580 BICRAQ9NZM4 1560 aa17.01■□□□□ 0.31
NBPF1-203ENST00000430580 CUX1P39880 1505 aa16.99■□□□□ 0.31
NBPF1-203ENST00000430580 TMF1P82094 1093 aa16.99■□□□□ 0.31
NBPF1-203ENST00000430580 NUP155O75694 1391 aa16.99■□□□□ 0.31
NBPF1-203ENST00000430580 LRRC9Q6ZRR7 1453 aa16.98■□□□□ 0.31
NBPF1-203ENST00000430580 SENP3-EIF4A1A0A087X0R7 540 aa16.98■□□□□ 0.31
NBPF1-203ENST00000430580 SENP3Q9H4L4 574 aaPredicted RBP16.97■□□□□ 0.31
NBPF1-203ENST00000430580 PPP4R2Q9NY27 417 aa16.97■□□□□ 0.31
NBPF1-203ENST00000430580 ARAP1Q96P48 1450 aa16.97■□□□□ 0.31
NBPF1-203ENST00000430580 CC2D1BQ5T0F9 858 aaKnown RBP16.97■□□□□ 0.31
NBPF1-203ENST00000430580 CFAP53Q96M91 514 aa16.96■□□□□ 0.31
NBPF1-203ENST00000430580 PRXQ9BXM0 1461 aa16.95■□□□□ 0.3
NBPF1-203ENST00000430580 CC2D2AQ9P2K1 1620 aa16.94■□□□□ 0.3
NBPF1-203ENST00000430580 JPH4Q96JJ6 628 aa16.94■□□□□ 0.3
NBPF1-203ENST00000430580 CASKIN1Q8WXD9 1431 aa16.94■□□□□ 0.3
NBPF1-203ENST00000430580 ROCK2O75116 1388 aaKnown RBP16.93■□□□□ 0.3
NBPF1-203ENST00000430580 L3MBTL2Q969R5 705 aa16.92■□□□□ 0.3
NBPF1-203ENST00000430580 FGD6Q6ZV73 1430 aa16.92■□□□□ 0.3
NBPF1-203ENST00000430580 UNC13AQ9UPW8 1703 aa16.92■□□□□ 0.3
NBPF1-203ENST00000430580 HNRNPMP52272 730 aaKnown RBP eCLIP16.91■□□□□ 0.3
NBPF1-203ENST00000430580 PHLDB1Q86UU1 1377 aa16.91■□□□□ 0.3
NBPF1-203ENST00000430580 FYCO1Q9BQS8 1478 aa16.91■□□□□ 0.3
NBPF1-203ENST00000430580 EFCAB2Q5VUJ9 269 aa16.9■□□□□ 0.3
NBPF1-203ENST00000430580 MYOM3Q5VTT5 1437 aa16.89■□□□□ 0.29
NBPF1-203ENST00000430580 RRBP1Q9P2E9 1410 aaKnown RBP16.89■□□□□ 0.29
NBPF1-203ENST00000430580 RSPH4AQ5TD94 716 aa16.89■□□□□ 0.29
NBPF1-203ENST00000430580 EFCAB5A4FU69 1503 aa16.88■□□□□ 0.29
NBPF1-203ENST00000430580 NBR1Q14596 966 aa16.88■□□□□ 0.29
NBPF1-203ENST00000430580 KTN1Q86UP2 1357 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms