RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 TRHP20396 242 aaPredicted RBP30.06■■■□□ 2.4
NUP50-208ENST00000430547 CARMIL1Q5VZK9 1371 aa30.05■■■□□ 2.4
NUP50-208ENST00000430547 JPH4Q96JJ6 628 aa30.05■■■□□ 2.4
NUP50-208ENST00000430547 KIAA0586Q9BVV6 1533 aa30.01■■■□□ 2.39
NUP50-208ENST00000430547 RAPGEF2Q9Y4G8 1499 aa29.87■■■□□ 2.37
NUP50-208ENST00000430547 IQGAP2Q13576 1575 aa29.85■■■□□ 2.37
NUP50-208ENST00000430547 CARMIL2Q6F5E8 1435 aa29.75■■■□□ 2.35
NUP50-208ENST00000430547 CTTNBP2Q8WZ74 1663 aa29.72■■■□□ 2.35
NUP50-208ENST00000430547 ADCY10Q96PN6 1610 aa29.69■■■□□ 2.34
NUP50-208ENST00000430547 NPM1P06748 294 aaKnown RBP eCLIP29.67■■■□□ 2.34
NUP50-208ENST00000430547 PTPRGP23470 1445 aa29.65■■■□□ 2.34
NUP50-208ENST00000430547 TNIKQ9UKE5 1360 aa29.64■■■□□ 2.33
NUP50-208ENST00000430547 TTBK1Q5TCY1 1321 aaPredicted RBP29.63■■■□□ 2.33
NUP50-208ENST00000430547 PRXQ9BXM0 1461 aa29.62■■■□□ 2.33
NUP50-208ENST00000430547 UGGT2Q9NYU1 1516 aa29.62■■■□□ 2.33
NUP50-208ENST00000430547 KIF13AQ9H1H9 1805 aa29.59■■■□□ 2.33
NUP50-208ENST00000430547 DISP1Q96F81 1524 aa29.59■■■□□ 2.33
NUP50-208ENST00000430547 KIAA0556O60303 1618 aa29.56■■■□□ 2.32
NUP50-208ENST00000430547 MAPKBP1O60336 1514 aa29.56■■■□□ 2.32
NUP50-208ENST00000430547 EEA1Q15075 1411 aa29.53■■■□□ 2.32
NUP50-208ENST00000430547 CSRNP3Q8WYN3 585 aa29.5■■■□□ 2.31
NUP50-208ENST00000430547 GOLGA3Q08378 1498 aa29.47■■■□□ 2.31
NUP50-208ENST00000430547 ABCC10Q5T3U5 1492 aa29.46■■■□□ 2.31
NUP50-208ENST00000430547 ABCC2Q92887 1545 aa29.45■■■□□ 2.3
NUP50-208ENST00000430547 UACAQ9BZF9 1416 aa29.45■■■□□ 2.3
NUP50-208ENST00000430547 DIP2BQ9P265 1576 aa29.44■■■□□ 2.3
NUP50-208ENST00000430547 UHRF1BP1LA0JNW5 1464 aa29.43■■■□□ 2.3
NUP50-208ENST00000430547 FAM69CQ0P6D2 419 aa29.41■■■□□ 2.3
NUP50-208ENST00000430547 FAM9AQ8IZU1 332 aaPredicted RBP29.36■■■□□ 2.29
NUP50-208ENST00000430547 CHIC1Q5VXU3 224 aa29.31■■■□□ 2.28
NUP50-208ENST00000430547 ZCCHC11Q5TAX3 1644 aaKnown RBP29.31■■■□□ 2.28
NUP50-208ENST00000430547 TSPOAP1O95153 1857 aa29.3■■■□□ 2.28
NUP50-208ENST00000430547 PLB1Q6P1J6 1458 aa29.29■■■□□ 2.28
NUP50-208ENST00000430547 ASXL2Q76L83 1435 aa29.29■■■□□ 2.28
NUP50-208ENST00000430547 KDM5BQ9UGL1 1544 aa29.29■■■□□ 2.28
NUP50-208ENST00000430547 KIF21BO75037 1637 aa29.27■■■□□ 2.28
NUP50-208ENST00000430547 ABCA8O94911 1581 aa29.22■■■□□ 2.27
NUP50-208ENST00000430547 SAMD9Q5K651 1589 aa29.22■■■□□ 2.27
NUP50-208ENST00000430547 P3H3Q8IVL6 736 aa29.19■■■□□ 2.26
NUP50-208ENST00000430547 GLI2P10070 1586 aa29.18■■■□□ 2.26
NUP50-208ENST00000430547 RANGAP1P46060 587 aaPredicted RBP29.13■■■□□ 2.25
NUP50-208ENST00000430547 EPRSP07814 1512 aaKnown RBP29.12■■■□□ 2.25
NUP50-208ENST00000430547 KDM6BO15054 1643 aa29.12■■■□□ 2.25
NUP50-208ENST00000430547 WDR7Q9Y4E6 1490 aa29.1■■■□□ 2.25
NUP50-208ENST00000430547 MAP3K4Q9Y6R4 1608 aa29.07■■■□□ 2.24
NUP50-208ENST00000430547 PPRC1Q5VV67 1664 aaKnown RBP29.06■■■□□ 2.24
NUP50-208ENST00000430547 RAPGEF6Q8TEU7 1601 aa29.05■■■□□ 2.24
NUP50-208ENST00000430547 EFCAB5A4FU69 1503 aa29.04■■■□□ 2.24
NUP50-208ENST00000430547 EHMT2Q96KQ7 1210 aa29.04■■■□□ 2.24
NUP50-208ENST00000430547 UBTFP17480 764 aaKnown RBP29.02■■■□□ 2.24
NUP50-208ENST00000430547 FHOD3Q2V2M9 1422 aa29.01■■■□□ 2.23
NUP50-208ENST00000430547 ARID3CA6NKF2 412 aa28.98■■■□□ 2.23
NUP50-208ENST00000430547 TEX14Q8IWB6 1497 aa28.97■■■□□ 2.23
NUP50-208ENST00000430547 CFAP43Q8NDM7 1665 aa28.96■■■□□ 2.23
NUP50-208ENST00000430547 ATP10BO94823 1461 aa28.95■■■□□ 2.22
NUP50-208ENST00000430547 KCNH8Q96L42 1107 aa28.94■■■□□ 2.22
NUP50-208ENST00000430547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.89■■■□□ 2.22
NUP50-208ENST00000430547 HNRNPUL2Q1KMD3 747 aaKnown RBP28.89■■■□□ 2.22
NUP50-208ENST00000430547 NUP153P49790 1475 aaKnown RBP28.87■■■□□ 2.21
NUP50-208ENST00000430547 CD109Q6YHK3 1445 aa28.86■■■□□ 2.21
NUP50-208ENST00000430547 AEBP2Q6ZN18 517 aaPredicted RBP28.86■■■□□ 2.21
NUP50-208ENST00000430547 MAGI3Q5TCQ9 1506 aa28.82■■■□□ 2.2
NUP50-208ENST00000430547 ABCA9Q8IUA7 1624 aa28.78■■■□□ 2.2
NUP50-208ENST00000430547 ARHGAP35Q9NRY4 1499 aa28.78■■■□□ 2.2
NUP50-208ENST00000430547 FMN1Q68DA7 1419 aa28.76■■■□□ 2.19
NUP50-208ENST00000430547 COL17A1Q9UMD9 1497 aaPredicted RBP28.73■■■□□ 2.19
NUP50-208ENST00000430547 HECW1Q76N89 1606 aa28.72■■■□□ 2.19
NUP50-208ENST00000430547 PLEKHD1A6NEE1 506 aa28.7■■■□□ 2.18
NUP50-208ENST00000430547 ATP1B4Q9UN42 357 aaPredicted RBP28.67■■■□□ 2.18
NUP50-208ENST00000430547 CDK13Q14004 1512 aaKnown RBP28.66■■■□□ 2.18
NUP50-208ENST00000430547 PHLDB1Q86UU1 1377 aa28.58■■■□□ 2.17
NUP50-208ENST00000430547 ARAP3Q8WWN8 1544 aa28.58■■■□□ 2.17
NUP50-208ENST00000430547 NEO1Q92859 1461 aa28.57■■■□□ 2.16
NUP50-208ENST00000430547 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.55■■■□□ 2.16
NUP50-208ENST00000430547 TTC37Q6PGP7 1564 aa28.54■■■□□ 2.16
NUP50-208ENST00000430547 CFAP74Q9C0B2 1584 aa28.54■■■□□ 2.16
NUP50-208ENST00000430547 LRRIQ1Q96JM4 1722 aa28.53■■■□□ 2.16
NUP50-208ENST00000430547 CDK11AQ9UQ88 783 aaPredicted RBP28.53■■■□□ 2.16
NUP50-208ENST00000430547 PCF11O94913 1555 aaKnown RBP28.52■■■□□ 2.16
NUP50-208ENST00000430547 CLIP1P30622 1438 aa28.52■■■□□ 2.16
NUP50-208ENST00000430547 KDM4FA0A1W2PPD8 638 aa28.48■■■□□ 2.15
NUP50-208ENST00000430547 CASKIN1Q8WXD9 1431 aa28.46■■■□□ 2.15
NUP50-208ENST00000430547 KIF14Q15058 1648 aa28.46■■■□□ 2.15
NUP50-208ENST00000430547 FANCAO15360 1455 aa28.46■■■□□ 2.15
NUP50-208ENST00000430547 ADGRL1O94910 1474 aa28.46■■■□□ 2.15
NUP50-208ENST00000430547 MYO5CQ9NQX4 1742 aa28.45■■■□□ 2.14
NUP50-208ENST00000430547 CCDC18Q5T9S5 1454 aa28.44■■■□□ 2.14
NUP50-208ENST00000430547 FYCO1Q9BQS8 1478 aa28.41■■■□□ 2.14
NUP50-208ENST00000430547 TROQ12816 1431 aaPredicted RBP28.41■■■□□ 2.14
NUP50-208ENST00000430547 AKNAQ7Z591 1439 aa28.4■■■□□ 2.14
NUP50-208ENST00000430547 RAPGEF3O95398 923 aa28.39■■■□□ 2.14
NUP50-208ENST00000430547 FRMPD1Q5SYB0 1578 aa28.38■■■□□ 2.13
NUP50-208ENST00000430547 DENND4BO75064 1496 aaPredicted RBP28.37■■■□□ 2.13
NUP50-208ENST00000430547 RICTORQ6R327 1708 aa28.37■■■□□ 2.13
NUP50-208ENST00000430547 PLCH2O75038 1416 aa28.35■■■□□ 2.13
NUP50-208ENST00000430547 CEP162Q5TB80 1403 aa28.28■■■□□ 2.12
NUP50-208ENST00000430547 ARHGAP5Q13017 1502 aa28.28■■■□□ 2.12
NUP50-208ENST00000430547 EFCAB2Q5VUJ9 269 aa28.26■■■□□ 2.11
NUP50-208ENST00000430547 ARHGEF40Q8TER5 1519 aa28.25■■■□□ 2.11
NUP50-208ENST00000430547 SCAPERQ9BY12 1400 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms