RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 JPH4Q96JJ6 628 aa26.09■■□□□ 1.77
MSH5-208ENST00000429846 IGF1RP08069 1367 aa26.04■■□□□ 1.76
MSH5-208ENST00000429846 KIAA0586Q9BVV6 1533 aa26.02■■□□□ 1.76
MSH5-208ENST00000429846 KIF13AQ9H1H9 1805 aa25.95■■□□□ 1.75
MSH5-208ENST00000429846 CARMIL1Q5VZK9 1371 aa25.89■■□□□ 1.74
MSH5-208ENST00000429846 MAPKBP1O60336 1514 aa25.88■■□□□ 1.73
MSH5-208ENST00000429846 ADCY10Q96PN6 1610 aa25.88■■□□□ 1.73
MSH5-208ENST00000429846 NPM1P06748 294 aaKnown RBP eCLIP25.84■■□□□ 1.73
MSH5-208ENST00000429846 ABCC10Q5T3U5 1492 aa25.82■■□□□ 1.72
MSH5-208ENST00000429846 IQGAP2Q13576 1575 aa25.8■■□□□ 1.72
MSH5-208ENST00000429846 DIP2BQ9P265 1576 aa25.78■■□□□ 1.72
MSH5-208ENST00000429846 CARMIL2Q6F5E8 1435 aa25.77■■□□□ 1.72
MSH5-208ENST00000429846 PTPRGP23470 1445 aa25.73■■□□□ 1.71
MSH5-208ENST00000429846 TNIKQ9UKE5 1360 aa25.71■■□□□ 1.71
MSH5-208ENST00000429846 FAM69CQ0P6D2 419 aa25.71■■□□□ 1.71
MSH5-208ENST00000429846 RAPGEF2Q9Y4G8 1499 aa25.7■■□□□ 1.7
MSH5-208ENST00000429846 AEBP2Q6ZN18 517 aaPredicted RBP25.67■■□□□ 1.7
MSH5-208ENST00000429846 ABCC2Q92887 1545 aa25.64■■□□□ 1.7
MSH5-208ENST00000429846 DISP1Q96F81 1524 aa25.63■■□□□ 1.69
MSH5-208ENST00000429846 UGGT2Q9NYU1 1516 aa25.63■■□□□ 1.69
MSH5-208ENST00000429846 UHRF1BP1LA0JNW5 1464 aa25.61■■□□□ 1.69
MSH5-208ENST00000429846 KIAA0556O60303 1618 aa25.56■■□□□ 1.68
MSH5-208ENST00000429846 UACAQ9BZF9 1416 aa25.56■■□□□ 1.68
MSH5-208ENST00000429846 CTTNBP2Q8WZ74 1663 aa25.56■■□□□ 1.68
MSH5-208ENST00000429846 KDM6BO15054 1643 aa25.55■■□□□ 1.68
MSH5-208ENST00000429846 TSPOAP1O95153 1857 aa25.55■■□□□ 1.68
MSH5-208ENST00000429846 TTBK1Q5TCY1 1321 aaPredicted RBP25.55■■□□□ 1.68
MSH5-208ENST00000429846 PLB1Q6P1J6 1458 aa25.54■■□□□ 1.68
MSH5-208ENST00000429846 ASXL2Q76L83 1435 aa25.52■■□□□ 1.68
MSH5-208ENST00000429846 GLI2P10070 1586 aa25.51■■□□□ 1.67
MSH5-208ENST00000429846 KDM5BQ9UGL1 1544 aa25.49■■□□□ 1.67
MSH5-208ENST00000429846 PRXQ9BXM0 1461 aa25.44■■□□□ 1.66
MSH5-208ENST00000429846 ZCCHC11Q5TAX3 1644 aaKnown RBP25.44■■□□□ 1.66
MSH5-208ENST00000429846 GOLGA3Q08378 1498 aa25.43■■□□□ 1.66
MSH5-208ENST00000429846 PPRC1Q5VV67 1664 aaKnown RBP25.42■■□□□ 1.66
MSH5-208ENST00000429846 EPRSP07814 1512 aaKnown RBP25.38■■□□□ 1.65
MSH5-208ENST00000429846 MAP3K4Q9Y6R4 1608 aa25.37■■□□□ 1.65
MSH5-208ENST00000429846 ABCA8O94911 1581 aa25.31■■□□□ 1.64
MSH5-208ENST00000429846 TEX14Q8IWB6 1497 aa25.31■■□□□ 1.64
MSH5-208ENST00000429846 WDR7Q9Y4E6 1490 aa25.31■■□□□ 1.64
MSH5-208ENST00000429846 CFAP43Q8NDM7 1665 aa25.21■■□□□ 1.63
MSH5-208ENST00000429846 EEA1Q15075 1411 aa25.2■■□□□ 1.62
MSH5-208ENST00000429846 FAM9AQ8IZU1 332 aaPredicted RBP25.17■■□□□ 1.62
MSH5-208ENST00000429846 CSRNP3Q8WYN3 585 aa25.17■■□□□ 1.62
MSH5-208ENST00000429846 SAMD9Q5K651 1589 aa25.17■■□□□ 1.62
MSH5-208ENST00000429846 COL17A1Q9UMD9 1497 aaPredicted RBP25.16■■□□□ 1.62
MSH5-208ENST00000429846 KDM4FA0A1W2PPD8 638 aa25.16■■□□□ 1.62
MSH5-208ENST00000429846 MAGI3Q5TCQ9 1506 aa25.15■■□□□ 1.62
MSH5-208ENST00000429846 CD109Q6YHK3 1445 aa25.12■■□□□ 1.61
MSH5-208ENST00000429846 RAPGEF6Q8TEU7 1601 aa25.06■■□□□ 1.6
MSH5-208ENST00000429846 ATP10BO94823 1461 aa25.05■■□□□ 1.6
MSH5-208ENST00000429846 ADGRL1O94910 1474 aa25.05■■□□□ 1.6
MSH5-208ENST00000429846 KCNH8Q96L42 1107 aa25.05■■□□□ 1.6
MSH5-208ENST00000429846 P3H3Q8IVL6 736 aa25.03■■□□□ 1.6
MSH5-208ENST00000429846 ABCA9Q8IUA7 1624 aa25■■□□□ 1.59
MSH5-208ENST00000429846 KIF21BO75037 1637 aa24.99■■□□□ 1.59
MSH5-208ENST00000429846 ARAP3Q8WWN8 1544 aa24.95■■□□□ 1.58
MSH5-208ENST00000429846 ARID3CA6NKF2 412 aa24.94■■□□□ 1.58
MSH5-208ENST00000429846 EFCAB5A4FU69 1503 aa24.94■■□□□ 1.58
MSH5-208ENST00000429846 NUP153P49790 1475 aaKnown RBP24.93■■□□□ 1.58
MSH5-208ENST00000429846 PHLDB1Q86UU1 1377 aa24.92■■□□□ 1.58
MSH5-208ENST00000429846 FHOD3Q2V2M9 1422 aa24.91■■□□□ 1.58
MSH5-208ENST00000429846 NEO1Q92859 1461 aa24.86■■□□□ 1.57
MSH5-208ENST00000429846 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.85■■□□□ 1.57
MSH5-208ENST00000429846 HNRNPUL2Q1KMD3 747 aaKnown RBP24.85■■□□□ 1.57
MSH5-208ENST00000429846 RANGAP1P46060 587 aaPredicted RBP24.83■■□□□ 1.57
MSH5-208ENST00000429846 PLEKHD1A6NEE1 506 aa24.75■■□□□ 1.55
MSH5-208ENST00000429846 CFAP74Q9C0B2 1584 aa24.75■■□□□ 1.55
MSH5-208ENST00000429846 FRMPD1Q5SYB0 1578 aa24.74■■□□□ 1.55
MSH5-208ENST00000429846 HECW2Q9P2P5 1572 aa24.71■■□□□ 1.55
MSH5-208ENST00000429846 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.71■■□□□ 1.55
MSH5-208ENST00000429846 FMN1Q68DA7 1419 aa24.69■■□□□ 1.54
MSH5-208ENST00000429846 HECW1Q76N89 1606 aa24.68■■□□□ 1.54
MSH5-208ENST00000429846 TTC37Q6PGP7 1564 aa24.68■■□□□ 1.54
MSH5-208ENST00000429846 RAPGEF3O95398 923 aa24.68■■□□□ 1.54
MSH5-208ENST00000429846 CHIC1Q5VXU3 224 aa24.68■■□□□ 1.54
MSH5-208ENST00000429846 UBTFP17480 764 aaKnown RBP24.67■■□□□ 1.54
MSH5-208ENST00000429846 RICTORQ6R327 1708 aa24.66■■□□□ 1.54
MSH5-208ENST00000429846 CDK13Q14004 1512 aaKnown RBP24.66■■□□□ 1.54
MSH5-208ENST00000429846 FANCAO15360 1455 aa24.66■■□□□ 1.54
MSH5-208ENST00000429846 ADAMTSL3P82987 1691 aa24.65■■□□□ 1.54
MSH5-208ENST00000429846 DENND4BO75064 1496 aaPredicted RBP24.64■■□□□ 1.54
MSH5-208ENST00000429846 AKNAQ7Z591 1439 aa24.64■■□□□ 1.54
MSH5-208ENST00000429846 ARHGEF40Q8TER5 1519 aa24.64■■□□□ 1.53
MSH5-208ENST00000429846 ARHGAP35Q9NRY4 1499 aa24.64■■□□□ 1.53
MSH5-208ENST00000429846 BCORL1Q5H9F3 1711 aa24.61■■□□□ 1.53
MSH5-208ENST00000429846 ZMYM4Q5VZL5 1548 aa24.59■■□□□ 1.53
MSH5-208ENST00000429846 PTPRMP28827 1452 aa24.56■■□□□ 1.52
MSH5-208ENST00000429846 EHMT2Q96KQ7 1210 aa24.55■■□□□ 1.52
MSH5-208ENST00000429846 MYO5CQ9NQX4 1742 aa24.55■■□□□ 1.52
MSH5-208ENST00000429846 PLCH2O75038 1416 aa24.54■■□□□ 1.52
MSH5-208ENST00000429846 CDK11AQ9UQ88 783 aaPredicted RBP24.53■■□□□ 1.52
MSH5-208ENST00000429846 MADDQ8WXG6 1647 aa24.53■■□□□ 1.52
MSH5-208ENST00000429846 MAGI2Q86UL8 1455 aa24.52■■□□□ 1.52
MSH5-208ENST00000429846 KIF14Q15058 1648 aa24.52■■□□□ 1.52
MSH5-208ENST00000429846 ZFYVE16Q7Z3T8 1539 aa24.51■■□□□ 1.51
MSH5-208ENST00000429846 ARID4BQ4LE39 1312 aaPredicted RBP24.5■■□□□ 1.51
MSH5-208ENST00000429846 ATP1B4Q9UN42 357 aaPredicted RBP24.49■■□□□ 1.51
MSH5-208ENST00000429846 POGZQ7Z3K3 1410 aa24.49■■□□□ 1.51
MSH5-208ENST00000429846 LRRIQ1Q96JM4 1722 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms