RNA–Protein interactions for RNA: ENST00000429812.5

PDLIM2-210, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-210ENST00000429812 KIF27Q86VH2 1401 aa31.1■■■□□ 2.57
PDLIM2-210ENST00000429812 KIAA0586Q9BVV6 1533 aa30.95■■■□□ 2.55
PDLIM2-210ENST00000429812 CUL7Q14999 1698 aa30.95■■■□□ 2.55
PDLIM2-210ENST00000429812 CARMIL1Q5VZK9 1371 aa30.92■■■□□ 2.54
PDLIM2-210ENST00000429812 TTBK1Q5TCY1 1321 aaPredicted RBP30.85■■■□□ 2.53
PDLIM2-210ENST00000429812 KIF13AQ9H1H9 1805 aa30.81■■■□□ 2.52
PDLIM2-210ENST00000429812 ADCY10Q96PN6 1610 aa30.8■■■□□ 2.52
PDLIM2-210ENST00000429812 NPM1P06748 294 aaKnown RBP eCLIP30.8■■■□□ 2.52
PDLIM2-210ENST00000429812 FAM69CQ0P6D2 419 aa30.76■■■□□ 2.51
PDLIM2-210ENST00000429812 PTPRGP23470 1445 aa30.71■■■□□ 2.51
PDLIM2-210ENST00000429812 ABCC10Q5T3U5 1492 aa30.7■■■□□ 2.5
PDLIM2-210ENST00000429812 MAPKBP1O60336 1514 aa30.68■■■□□ 2.5
PDLIM2-210ENST00000429812 IQGAP2Q13576 1575 aa30.66■■■□□ 2.5
PDLIM2-210ENST00000429812 AEBP2Q6ZN18 517 aaPredicted RBP30.65■■■□□ 2.5
PDLIM2-210ENST00000429812 TNIKQ9UKE5 1360 aa30.63■■■□□ 2.49
PDLIM2-210ENST00000429812 CARMIL2Q6F5E8 1435 aa30.63■■■□□ 2.49
PDLIM2-210ENST00000429812 DIP2BQ9P265 1576 aa30.62■■■□□ 2.49
PDLIM2-210ENST00000429812 RAPGEF2Q9Y4G8 1499 aa30.61■■■□□ 2.49
PDLIM2-210ENST00000429812 DISP1Q96F81 1524 aa30.57■■■□□ 2.48
PDLIM2-210ENST00000429812 ABCC2Q92887 1545 aa30.49■■■□□ 2.47
PDLIM2-210ENST00000429812 TSPOAP1O95153 1857 aa30.46■■■□□ 2.47
PDLIM2-210ENST00000429812 UGGT2Q9NYU1 1516 aa30.46■■■□□ 2.47
PDLIM2-210ENST00000429812 UACAQ9BZF9 1416 aa30.45■■■□□ 2.46
PDLIM2-210ENST00000429812 ASXL2Q76L83 1435 aa30.43■■■□□ 2.46
PDLIM2-210ENST00000429812 UHRF1BP1LA0JNW5 1464 aa30.4■■■□□ 2.46
PDLIM2-210ENST00000429812 KIAA0556O60303 1618 aa30.4■■■□□ 2.46
PDLIM2-210ENST00000429812 KDM6BO15054 1643 aa30.34■■■□□ 2.45
PDLIM2-210ENST00000429812 PLB1Q6P1J6 1458 aa30.34■■■□□ 2.45
PDLIM2-210ENST00000429812 PRXQ9BXM0 1461 aa30.31■■■□□ 2.44
PDLIM2-210ENST00000429812 CTTNBP2Q8WZ74 1663 aa30.3■■■□□ 2.44
PDLIM2-210ENST00000429812 KDM5BQ9UGL1 1544 aa30.3■■■□□ 2.44
PDLIM2-210ENST00000429812 ZCCHC11Q5TAX3 1644 aaKnown RBP30.25■■■□□ 2.43
PDLIM2-210ENST00000429812 GLI2P10070 1586 aa30.24■■■□□ 2.43
PDLIM2-210ENST00000429812 PPRC1Q5VV67 1664 aaKnown RBP30.23■■■□□ 2.43
PDLIM2-210ENST00000429812 EPRSP07814 1512 aaKnown RBP30.22■■■□□ 2.43
PDLIM2-210ENST00000429812 GOLGA3Q08378 1498 aa30.19■■■□□ 2.42
PDLIM2-210ENST00000429812 P3H3Q8IVL6 736 aa30.18■■■□□ 2.42
PDLIM2-210ENST00000429812 CSRNP3Q8WYN3 585 aa30.14■■■□□ 2.42
PDLIM2-210ENST00000429812 KDM4FA0A1W2PPD8 638 aa30.13■■■□□ 2.41
PDLIM2-210ENST00000429812 ARID3CA6NKF2 412 aa30.12■■■□□ 2.41
PDLIM2-210ENST00000429812 ABCA8O94911 1581 aa30.11■■■□□ 2.41
PDLIM2-210ENST00000429812 COL17A1Q9UMD9 1497 aaPredicted RBP30.11■■■□□ 2.41
PDLIM2-210ENST00000429812 WDR7Q9Y4E6 1490 aa30.11■■■□□ 2.41
PDLIM2-210ENST00000429812 MAP3K4Q9Y6R4 1608 aa30.1■■■□□ 2.41
PDLIM2-210ENST00000429812 KCNH8Q96L42 1107 aa30.09■■■□□ 2.41
PDLIM2-210ENST00000429812 FAM9AQ8IZU1 332 aaPredicted RBP30.06■■■□□ 2.4
PDLIM2-210ENST00000429812 RANGAP1P46060 587 aaPredicted RBP30.03■■■□□ 2.4
PDLIM2-210ENST00000429812 TEX14Q8IWB6 1497 aa29.99■■■□□ 2.39
PDLIM2-210ENST00000429812 CD109Q6YHK3 1445 aa29.95■■■□□ 2.38
PDLIM2-210ENST00000429812 ATP10BO94823 1461 aa29.91■■■□□ 2.38
PDLIM2-210ENST00000429812 SAMD9Q5K651 1589 aa29.9■■■□□ 2.38
PDLIM2-210ENST00000429812 EEA1Q15075 1411 aa29.88■■■□□ 2.37
PDLIM2-210ENST00000429812 CFAP43Q8NDM7 1665 aa29.85■■■□□ 2.37
PDLIM2-210ENST00000429812 EHMT2Q96KQ7 1210 aa29.85■■■□□ 2.37
PDLIM2-210ENST00000429812 ADGRL1O94910 1474 aa29.85■■■□□ 2.37
PDLIM2-210ENST00000429812 MAGI3Q5TCQ9 1506 aa29.85■■■□□ 2.37
PDLIM2-210ENST00000429812 FHOD3Q2V2M9 1422 aa29.83■■■□□ 2.37
PDLIM2-210ENST00000429812 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.81■■■□□ 2.36
PDLIM2-210ENST00000429812 HNRNPUL2Q1KMD3 747 aaKnown RBP29.81■■■□□ 2.36
PDLIM2-210ENST00000429812 RAPGEF6Q8TEU7 1601 aa29.79■■■□□ 2.36
PDLIM2-210ENST00000429812 NUP153P49790 1475 aaKnown RBP29.74■■■□□ 2.35
PDLIM2-210ENST00000429812 CHIC1Q5VXU3 224 aa29.69■■■□□ 2.34
PDLIM2-210ENST00000429812 KIF21BO75037 1637 aa29.69■■■□□ 2.34
PDLIM2-210ENST00000429812 ABCA9Q8IUA7 1624 aa29.67■■■□□ 2.34
PDLIM2-210ENST00000429812 ARAP3Q8WWN8 1544 aa29.61■■■□□ 2.33
PDLIM2-210ENST00000429812 RAPGEF3O95398 923 aa29.61■■■□□ 2.33
PDLIM2-210ENST00000429812 UBTFP17480 764 aaKnown RBP29.61■■■□□ 2.33
PDLIM2-210ENST00000429812 EFCAB5A4FU69 1503 aa29.57■■■□□ 2.32
PDLIM2-210ENST00000429812 PLEKHD1A6NEE1 506 aa29.56■■■□□ 2.32
PDLIM2-210ENST00000429812 CDK13Q14004 1512 aaKnown RBP29.5■■■□□ 2.31
PDLIM2-210ENST00000429812 NEO1Q92859 1461 aa29.5■■■□□ 2.31
PDLIM2-210ENST00000429812 PHLDB1Q86UU1 1377 aa29.5■■■□□ 2.31
PDLIM2-210ENST00000429812 ATP1B4Q9UN42 357 aaPredicted RBP29.49■■■□□ 2.31
PDLIM2-210ENST00000429812 FRMPD1Q5SYB0 1578 aa29.44■■■□□ 2.3
PDLIM2-210ENST00000429812 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.44■■■□□ 2.3
PDLIM2-210ENST00000429812 ARHGAP35Q9NRY4 1499 aa29.43■■■□□ 2.3
PDLIM2-210ENST00000429812 TTC37Q6PGP7 1564 aa29.42■■■□□ 2.3
PDLIM2-210ENST00000429812 HECW2Q9P2P5 1572 aa29.41■■■□□ 2.3
PDLIM2-210ENST00000429812 AKNAQ7Z591 1439 aa29.38■■■□□ 2.29
PDLIM2-210ENST00000429812 FANCAO15360 1455 aa29.37■■■□□ 2.29
PDLIM2-210ENST00000429812 ARID4BQ4LE39 1312 aaPredicted RBP29.35■■■□□ 2.29
PDLIM2-210ENST00000429812 DENND4BO75064 1496 aaPredicted RBP29.35■■■□□ 2.29
PDLIM2-210ENST00000429812 FMN1Q68DA7 1419 aa29.34■■■□□ 2.29
PDLIM2-210ENST00000429812 HECW1Q76N89 1606 aa29.3■■■□□ 2.28
PDLIM2-210ENST00000429812 RICTORQ6R327 1708 aa29.28■■■□□ 2.28
PDLIM2-210ENST00000429812 ADAMTSL3P82987 1691 aa29.27■■■□□ 2.28
PDLIM2-210ENST00000429812 CFAP74Q9C0B2 1584 aa29.25■■■□□ 2.27
PDLIM2-210ENST00000429812 PTPRMP28827 1452 aa29.24■■■□□ 2.27
PDLIM2-210ENST00000429812 ARHGEF40Q8TER5 1519 aa29.24■■■□□ 2.27
PDLIM2-210ENST00000429812 PLCH2O75038 1416 aa29.23■■■□□ 2.27
PDLIM2-210ENST00000429812 YEATS2Q9ULM3 1422 aa29.22■■■□□ 2.27
PDLIM2-210ENST00000429812 BCORL1Q5H9F3 1711 aa29.22■■■□□ 2.27
PDLIM2-210ENST00000429812 SCAPERQ9BY12 1400 aa29.21■■■□□ 2.27
PDLIM2-210ENST00000429812 KIF14Q15058 1648 aa29.2■■■□□ 2.27
PDLIM2-210ENST00000429812 MADDQ8WXG6 1647 aa29.2■■■□□ 2.26
PDLIM2-210ENST00000429812 CDK11AQ9UQ88 783 aaPredicted RBP29.19■■■□□ 2.26
PDLIM2-210ENST00000429812 ILDR1Q86SU0 546 aaPredicted RBP29.18■■■□□ 2.26
PDLIM2-210ENST00000429812 LRRIQ1Q96JM4 1722 aa29.17■■■□□ 2.26
PDLIM2-210ENST00000429812 TROQ12816 1431 aaPredicted RBP29.16■■■□□ 2.26
PDLIM2-210ENST00000429812 ZMYM4Q5VZL5 1548 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms