RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 HNRNPUQ00839 825 aaKnown RBP eCLIP9.95□□□□□ -0.82
SYNPO2-202ENST00000429713 BAZ1AQ9NRL2 1556 aaPredicted RBP9.93□□□□□ -0.82
SYNPO2-202ENST00000429713 PKNOX2Q96KN3 472 aa9.93□□□□□ -0.82
SYNPO2-202ENST00000429713 TAF3Q5VWG9 929 aa9.92□□□□□ -0.82
SYNPO2-202ENST00000429713 HSP90AA1P07900 732 aaKnown RBP9.92□□□□□ -0.82
SYNPO2-202ENST00000429713 CCER2I3L3R5 266 aa9.92□□□□□ -0.82
SYNPO2-202ENST00000429713 ABCC8Q09428 1581 aa9.9□□□□□ -0.82
SYNPO2-202ENST00000429713 PPP4R2Q9NY27 417 aa9.9□□□□□ -0.82
SYNPO2-202ENST00000429713 NBR1Q14596 966 aa9.9□□□□□ -0.82
SYNPO2-202ENST00000429713 SLC4A1APQ9BWU0 796 aaKnown RBP9.9□□□□□ -0.83
SYNPO2-202ENST00000429713 CCDC136Q96JN2 1154 aa9.89□□□□□ -0.83
SYNPO2-202ENST00000429713 CEP164Q9UPV0 1460 aa9.89□□□□□ -0.83
SYNPO2-202ENST00000429713 HMGB1P09429 215 aaKnown RBP9.89□□□□□ -0.83
SYNPO2-202ENST00000429713 NPM2Q86SE8 214 aaKnown RBP9.88□□□□□ -0.83
SYNPO2-202ENST00000429713 RRP9O43818 475 aaKnown RBP9.87□□□□□ -0.83
SYNPO2-202ENST00000429713 TNIKQ9UKE5 1360 aa9.87□□□□□ -0.83
SYNPO2-202ENST00000429713 P3H3Q8IVL6 736 aa9.87□□□□□ -0.83
SYNPO2-202ENST00000429713 UNC13AQ9UPW8 1703 aa9.87□□□□□ -0.83
SYNPO2-202ENST00000429713 HSP90AA2PQ14568 343 aaPredicted RBP9.86□□□□□ -0.83
SYNPO2-202ENST00000429713 ISY1Q9ULR0 285 aaKnown RBP9.86□□□□□ -0.83
SYNPO2-202ENST00000429713 RBM19Q9Y4C8 960 aaKnown RBP9.86□□□□□ -0.83
SYNPO2-202ENST00000429713 PNNQ9H307 717 aaKnown RBP9.86□□□□□ -0.83
SYNPO2-202ENST00000429713 FAM9BQ8IZU0 186 aa9.85□□□□□ -0.83
SYNPO2-202ENST00000429713 GOLGA6L22H0YM25 854 aa9.84□□□□□ -0.83
SYNPO2-202ENST00000429713 CALRP27797 417 aaKnown RBP9.83□□□□□ -0.84
SYNPO2-202ENST00000429713 WRNQ14191 1432 aaPredicted RBP eCLIP9.83□□□□□ -0.84
SYNPO2-202ENST00000429713 TSHZ2Q9NRE2 1034 aa9.82□□□□□ -0.84
SYNPO2-202ENST00000429713 A0A0U1RQG5 324 aaPredicted RBP9.81□□□□□ -0.84
SYNPO2-202ENST00000429713 CANXP27824 592 aaKnown RBP9.81□□□□□ -0.84
SYNPO2-202ENST00000429713 IRX6P78412 446 aaPredicted RBP9.8□□□□□ -0.84
SYNPO2-202ENST00000429713 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.79□□□□□ -0.84
SYNPO2-202ENST00000429713 PODXL2Q9NZ53 605 aa9.79□□□□□ -0.84
SYNPO2-202ENST00000429713 HIRIP3Q9BW71 556 aaPredicted RBP9.79□□□□□ -0.84
SYNPO2-202ENST00000429713 MROH2BQ7Z745 1585 aa9.78□□□□□ -0.84
SYNPO2-202ENST00000429713 CHAF1AQ13111 956 aaPredicted RBP9.77□□□□□ -0.85
SYNPO2-202ENST00000429713 ARXQ96QS3 562 aa9.77□□□□□ -0.85
SYNPO2-202ENST00000429713 GOLGA6L3A6NEY3 463 aa9.77□□□□□ -0.85
SYNPO2-202ENST00000429713 NAP1L5Q96NT1 182 aaPredicted RBP9.77□□□□□ -0.85
SYNPO2-202ENST00000429713 IPO9Q96P70 1041 aaKnown RBP9.76□□□□□ -0.85
SYNPO2-202ENST00000429713 TMC1Q8TDI8 760 aa9.76□□□□□ -0.85
SYNPO2-202ENST00000429713 BAZ1BQ9UIG0 1483 aaKnown RBP9.76□□□□□ -0.85
SYNPO2-202ENST00000429713 CFAP44Q96MT7 982 aa9.75□□□□□ -0.85
SYNPO2-202ENST00000429713 MRS2Q9HD23 443 aa9.75□□□□□ -0.85
SYNPO2-202ENST00000429713 TOP2AP11388 1531 aaKnown RBP9.75□□□□□ -0.85
SYNPO2-202ENST00000429713 CECR2Q9BXF3 1484 aa9.75□□□□□ -0.85
SYNPO2-202ENST00000429713 TCERG1O14776 1098 aaKnown RBP9.74□□□□□ -0.85
SYNPO2-202ENST00000429713 TPM2P07951 284 aa9.74□□□□□ -0.85
SYNPO2-202ENST00000429713 FAM43AQ8N2R8 423 aa9.74□□□□□ -0.85
SYNPO2-202ENST00000429713 MTUS2Q5JR59 1369 aa9.73□□□□□ -0.85
SYNPO2-202ENST00000429713 TSPYL1Q9H0U9 437 aa9.73□□□□□ -0.85
SYNPO2-202ENST00000429713 CCDC88BA6NC98 1476 aa9.73□□□□□ -0.85
SYNPO2-202ENST00000429713 SOGA1O94964 1423 aa9.73□□□□□ -0.85
SYNPO2-202ENST00000429713 SMARCA4P51532 1647 aa9.72□□□□□ -0.85
SYNPO2-202ENST00000429713 EIF4G2P78344 907 aaKnown RBP eCLIP9.72□□□□□ -0.85
SYNPO2-202ENST00000429713 MS4A1P11836 297 aa9.71□□□□□ -0.85
SYNPO2-202ENST00000429713 VPS8Q8N3P4 1428 aa9.71□□□□□ -0.85
SYNPO2-202ENST00000429713 CCNB3Q8WWL7 1395 aa9.71□□□□□ -0.86
SYNPO2-202ENST00000429713 SALL2Q9Y467 1007 aaPredicted RBP9.7□□□□□ -0.86
SYNPO2-202ENST00000429713 KIF27Q86VH2 1401 aa9.7□□□□□ -0.86
SYNPO2-202ENST00000429713 ARID3CA6NKF2 412 aa9.7□□□□□ -0.86
SYNPO2-202ENST00000429713 MSNP26038 577 aaKnown RBP9.67□□□□□ -0.86
SYNPO2-202ENST00000429713 CSPP1Q1MSJ5 1256 aa9.67□□□□□ -0.86
SYNPO2-202ENST00000429713 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.67□□□□□ -0.86
SYNPO2-202ENST00000429713 CHIC2Q9UKJ5 165 aa9.67□□□□□ -0.86
SYNPO2-202ENST00000429713 ZNF777Q9ULD5 760 aaPredicted RBP9.67□□□□□ -0.86
SYNPO2-202ENST00000429713 GSE1Q14687 1217 aa9.66□□□□□ -0.86
SYNPO2-202ENST00000429713 ERCC6Q03468 1493 aa9.66□□□□□ -0.86
SYNPO2-202ENST00000429713 C11orf95C9JLR9 678 aaPredicted RBP9.66□□□□□ -0.86
SYNPO2-202ENST00000429713 NRDCO43847 1150 aa9.66□□□□□ -0.86
SYNPO2-202ENST00000429713 FBLN2P98095 1184 aa9.65□□□□□ -0.86
SYNPO2-202ENST00000429713 PHLDB1Q86UU1 1377 aa9.65□□□□□ -0.86
SYNPO2-202ENST00000429713 FHAD1B1AJZ9 1412 aa9.65□□□□□ -0.86
SYNPO2-202ENST00000429713 SMARCA2P51531 1590 aa9.64□□□□□ -0.87
SYNPO2-202ENST00000429713 GOLGA6L6A8MZA4 724 aa9.63□□□□□ -0.87
SYNPO2-202ENST00000429713 KAT6BQ8WYB5 2073 aa9.63□□□□□ -0.87
SYNPO2-202ENST00000429713 CCDC66A2RUB6 948 aa9.63□□□□□ -0.87
SYNPO2-202ENST00000429713 VSIG10Q8N0Z9 540 aa9.62□□□□□ -0.87
SYNPO2-202ENST00000429713 SETD5Q9C0A6 1442 aa9.62□□□□□ -0.87
SYNPO2-202ENST00000429713 CHMP4BQ9H444 224 aaKnown RBP9.62□□□□□ -0.87
SYNPO2-202ENST00000429713 ARHGAP35Q9NRY4 1499 aa9.62□□□□□ -0.87
SYNPO2-202ENST00000429713 WDR43Q15061 677 aaKnown RBP eCLIP9.61□□□□□ -0.87
SYNPO2-202ENST00000429713 SKOR2Q2VWA4 1001 aaPredicted RBP9.61□□□□□ -0.87
SYNPO2-202ENST00000429713 KIF21BO75037 1637 aa9.61□□□□□ -0.87
SYNPO2-202ENST00000429713 TAF7LQ5H9L4 462 aa9.61□□□□□ -0.87
SYNPO2-202ENST00000429713 DDX11L8A8MPP1 907 aa9.61□□□□□ -0.87
SYNPO2-202ENST00000429713 AAMPQ13685 434 aa9.61□□□□□ -0.87
SYNPO2-202ENST00000429713 HMGN5P82970 282 aaKnown RBP9.6□□□□□ -0.87
SYNPO2-202ENST00000429713 SIN3AQ96ST3 1273 aa9.6□□□□□ -0.87
SYNPO2-202ENST00000429713 RRP7BPQ9NSQ0 103 aa9.6□□□□□ -0.87
SYNPO2-202ENST00000429713 ARID3AQ99856 593 aa9.6□□□□□ -0.87
SYNPO2-202ENST00000429713 B4GALNT3Q6L9W6 998 aa9.59□□□□□ -0.87
SYNPO2-202ENST00000429713 GBP4Q96PP9 640 aa9.59□□□□□ -0.87
SYNPO2-202ENST00000429713 GOLGA6L1Q8N7Z2 621 aa9.58□□□□□ -0.88
SYNPO2-202ENST00000429713 KIAA2012Q0VF49 1180 aa9.58□□□□□ -0.88
SYNPO2-202ENST00000429713 KDM2AQ9Y2K7 1162 aa9.57□□□□□ -0.88
SYNPO2-202ENST00000429713 RAB3GAP2Q9H2M9 1393 aa9.57□□□□□ -0.88
SYNPO2-202ENST00000429713 ROCK2O75116 1388 aaKnown RBP9.57□□□□□ -0.88
SYNPO2-202ENST00000429713 PRDM2Q13029 1718 aa9.56□□□□□ -0.88
SYNPO2-202ENST00000429713 KTN1Q86UP2 1357 aaKnown RBP9.56□□□□□ -0.88
SYNPO2-202ENST00000429713 HOMEZQ8IX15 550 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms