RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 ARHGEF11O15085 1522 aa24.57■■□□□ 1.52
GARNL3-204ENST00000429629 KIF21BO75037 1637 aa24.56■■□□□ 1.52
GARNL3-204ENST00000429629 SHROOM2Q13796 1616 aa24.54■■□□□ 1.52
GARNL3-204ENST00000429629 PRG4Q92954 1404 aaPredicted RBP24.52■■□□□ 1.52
GARNL3-204ENST00000429629 IQGAP2Q13576 1575 aa24.5■■□□□ 1.51
GARNL3-204ENST00000429629 GOLGA3Q08378 1498 aa24.49■■□□□ 1.51
GARNL3-204ENST00000429629 RIMBP3CA6NJZ7 1639 aa24.46■■□□□ 1.51
GARNL3-204ENST00000429629 RIMBP3BA6NNM3 1639 aa24.46■■□□□ 1.51
GARNL3-204ENST00000429629 RIMBP3Q9UFD9 1639 aa24.46■■□□□ 1.51
GARNL3-204ENST00000429629 CARMIL2Q6F5E8 1435 aa24.46■■□□□ 1.51
GARNL3-204ENST00000429629 UGGT2Q9NYU1 1516 aa24.45■■□□□ 1.51
GARNL3-204ENST00000429629 UBTFP17480 764 aaKnown RBP24.43■■□□□ 1.5
GARNL3-204ENST00000429629 CYB5RLQ6IPT4 315 aa24.41■■□□□ 1.5
GARNL3-204ENST00000429629 ARAP1Q96P48 1450 aa24.39■■□□□ 1.5
GARNL3-204ENST00000429629 DISP1Q96F81 1524 aa24.36■■□□□ 1.49
GARNL3-204ENST00000429629 TNIKQ9UKE5 1360 aa24.36■■□□□ 1.49
GARNL3-204ENST00000429629 ERCC6L2Q5T890 1561 aa24.36■■□□□ 1.49
GARNL3-204ENST00000429629 CTTNBP2Q8WZ74 1663 aa24.34■■□□□ 1.49
GARNL3-204ENST00000429629 PTPRGP23470 1445 aa24.32■■□□□ 1.48
GARNL3-204ENST00000429629 EHMT2Q96KQ7 1210 aa24.26■■□□□ 1.47
GARNL3-204ENST00000429629 KIAA0556O60303 1618 aa24.24■■□□□ 1.47
GARNL3-204ENST00000429629 EFCAB5A4FU69 1503 aa24.2■■□□□ 1.46
GARNL3-204ENST00000429629 SAMD9Q5K651 1589 aa24.18■■□□□ 1.46
GARNL3-204ENST00000429629 LOC105371045A0A1W2PR82 267 aa24.16■■□□□ 1.46
GARNL3-204ENST00000429629 P3H3Q8IVL6 736 aa24.15■■□□□ 1.46
GARNL3-204ENST00000429629 UACAQ9BZF9 1416 aa24.15■■□□□ 1.46
GARNL3-204ENST00000429629 UHRF1BP1LA0JNW5 1464 aa24.14■■□□□ 1.46
GARNL3-204ENST00000429629 RANGAP1P46060 587 aaPredicted RBP24.13■■□□□ 1.45
GARNL3-204ENST00000429629 NPM1P06748 294 aaKnown RBP eCLIP24.1■■□□□ 1.45
GARNL3-204ENST00000429629 ARHGAP35Q9NRY4 1499 aa24.1■■□□□ 1.45
GARNL3-204ENST00000429629 TTBK1Q5TCY1 1321 aaPredicted RBP24.09■■□□□ 1.45
GARNL3-204ENST00000429629 CLIP1P30622 1438 aa24.06■■□□□ 1.44
GARNL3-204ENST00000429629 FHOD3Q2V2M9 1422 aa24.06■■□□□ 1.44
GARNL3-204ENST00000429629 FMN1Q68DA7 1419 aa24.04■■□□□ 1.44
GARNL3-204ENST00000429629 ABCC2Q92887 1545 aa24.03■■□□□ 1.44
GARNL3-204ENST00000429629 PLB1Q6P1J6 1458 aa24.02■■□□□ 1.44
GARNL3-204ENST00000429629 ABCA8O94911 1581 aa24.01■■□□□ 1.43
GARNL3-204ENST00000429629 CEP162Q5TB80 1403 aa24■■□□□ 1.43
GARNL3-204ENST00000429629 KDM5BQ9UGL1 1544 aa24■■□□□ 1.43
GARNL3-204ENST00000429629 ADCY10Q96PN6 1610 aa23.99■■□□□ 1.43
GARNL3-204ENST00000429629 MAPKBP1O60336 1514 aa23.91■■□□□ 1.42
GARNL3-204ENST00000429629 ATP10BO94823 1461 aa23.88■■□□□ 1.41
GARNL3-204ENST00000429629 RAPGEF6Q8TEU7 1601 aa23.87■■□□□ 1.41
GARNL3-204ENST00000429629 NUP153P49790 1475 aaKnown RBP23.87■■□□□ 1.41
GARNL3-204ENST00000429629 CASKIN1Q8WXD9 1431 aa23.86■■□□□ 1.41
GARNL3-204ENST00000429629 ASXL2Q76L83 1435 aa23.83■■□□□ 1.4
GARNL3-204ENST00000429629 ABCC10Q5T3U5 1492 aa23.8■■□□□ 1.4
GARNL3-204ENST00000429629 TRHP20396 242 aaPredicted RBP23.78■■□□□ 1.4
GARNL3-204ENST00000429629 CDK11AQ9UQ88 783 aaPredicted RBP23.78■■□□□ 1.4
GARNL3-204ENST00000429629 FYCO1Q9BQS8 1478 aa23.77■■□□□ 1.4
GARNL3-204ENST00000429629 PLEKHD1A6NEE1 506 aa23.77■■□□□ 1.4
GARNL3-204ENST00000429629 ZCCHC11Q5TAX3 1644 aaKnown RBP23.77■■□□□ 1.4
GARNL3-204ENST00000429629 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.76■■□□□ 1.39
GARNL3-204ENST00000429629 HNRNPUL2Q1KMD3 747 aaKnown RBP23.76■■□□□ 1.39
GARNL3-204ENST00000429629 ATP1B4Q9UN42 357 aaPredicted RBP23.76■■□□□ 1.39
GARNL3-204ENST00000429629 EPRSP07814 1512 aaKnown RBP23.75■■□□□ 1.39
GARNL3-204ENST00000429629 WDR7Q9Y4E6 1490 aa23.75■■□□□ 1.39
GARNL3-204ENST00000429629 FAM69CQ0P6D2 419 aa23.74■■□□□ 1.39
GARNL3-204ENST00000429629 HECW1Q76N89 1606 aa23.73■■□□□ 1.39
GARNL3-204ENST00000429629 ARID3CA6NKF2 412 aa23.73■■□□□ 1.39
GARNL3-204ENST00000429629 VPS8Q8N3P4 1428 aa23.73■■□□□ 1.39
GARNL3-204ENST00000429629 CCDC18Q5T9S5 1454 aa23.71■■□□□ 1.39
GARNL3-204ENST00000429629 GLI2P10070 1586 aa23.67■■□□□ 1.38
GARNL3-204ENST00000429629 PCF11O94913 1555 aaKnown RBP23.65■■□□□ 1.38
GARNL3-204ENST00000429629 KCNH8Q96L42 1107 aa23.65■■□□□ 1.38
GARNL3-204ENST00000429629 DIP2BQ9P265 1576 aa23.64■■□□□ 1.37
GARNL3-204ENST00000429629 CDK13Q14004 1512 aaKnown RBP23.63■■□□□ 1.37
GARNL3-204ENST00000429629 TROQ12816 1431 aaPredicted RBP23.59■■□□□ 1.37
GARNL3-204ENST00000429629 MAP3K1Q13233 1512 aa23.57■■□□□ 1.36
GARNL3-204ENST00000429629 CD109Q6YHK3 1445 aa23.54■■□□□ 1.36
GARNL3-204ENST00000429629 APLP2Q06481 763 aa23.51■■□□□ 1.35
GARNL3-204ENST00000429629 MAGI3Q5TCQ9 1506 aa23.5■■□□□ 1.35
GARNL3-204ENST00000429629 KIF13AQ9H1H9 1805 aa23.49■■□□□ 1.35
GARNL3-204ENST00000429629 MTUS2Q5JR59 1369 aa23.49■■□□□ 1.35
GARNL3-204ENST00000429629 PHLDB1Q86UU1 1377 aa23.48■■□□□ 1.35
GARNL3-204ENST00000429629 ABCA9Q8IUA7 1624 aa23.48■■□□□ 1.35
GARNL3-204ENST00000429629 TEX14Q8IWB6 1497 aa23.46■■□□□ 1.35
GARNL3-204ENST00000429629 LRRIQ1Q96JM4 1722 aa23.46■■□□□ 1.35
GARNL3-204ENST00000429629 MAP3K4Q9Y6R4 1608 aa23.46■■□□□ 1.35
GARNL3-204ENST00000429629 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.43■■□□□ 1.34
GARNL3-204ENST00000429629 CFAP43Q8NDM7 1665 aa23.43■■□□□ 1.34
GARNL3-204ENST00000429629 TIAM1Q13009 1591 aa23.43■■□□□ 1.34
GARNL3-204ENST00000429629 PLCH2O75038 1416 aa23.42■■□□□ 1.34
GARNL3-204ENST00000429629 LRRC9Q6ZRR7 1453 aa23.41■■□□□ 1.34
GARNL3-204ENST00000429629 KIF14Q15058 1648 aa23.4■■□□□ 1.34
GARNL3-204ENST00000429629 EHBP1L1Q8N3D4 1523 aa23.38■■□□□ 1.33
GARNL3-204ENST00000429629 ARAP3Q8WWN8 1544 aa23.38■■□□□ 1.33
GARNL3-204ENST00000429629 KANK4Q5T7N3 995 aaPredicted RBP23.38■■□□□ 1.33
GARNL3-204ENST00000429629 EFCAB2Q5VUJ9 269 aa23.38■■□□□ 1.33
GARNL3-204ENST00000429629 NEO1Q92859 1461 aa23.36■■□□□ 1.33
GARNL3-204ENST00000429629 TTC37Q6PGP7 1564 aa23.32■■□□□ 1.32
GARNL3-204ENST00000429629 CCNB3Q8WWL7 1395 aa23.32■■□□□ 1.32
GARNL3-204ENST00000429629 PPRC1Q5VV67 1664 aaKnown RBP23.31■■□□□ 1.32
GARNL3-204ENST00000429629 GPATCH8Q9UKJ3 1502 aaKnown RBP23.3■■□□□ 1.32
GARNL3-204ENST00000429629 FANCAO15360 1455 aa23.3■■□□□ 1.32
GARNL3-204ENST00000429629 AKNAQ7Z591 1439 aa23.28■■□□□ 1.32
GARNL3-204ENST00000429629 NCOA2Q15596 1464 aa23.28■■□□□ 1.32
GARNL3-204ENST00000429629 CFDP1Q9UEE9 299 aaPredicted RBP23.27■■□□□ 1.32
GARNL3-204ENST00000429629 COL17A1Q9UMD9 1497 aaPredicted RBP23.24■■□□□ 1.31
GARNL3-204ENST00000429629 TSPOAP1O95153 1857 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms