RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 IQGAP2Q13576 1575 aa15.85■□□□□ 0.13
NEDD1-203ENST00000429527 RAPGEF2Q9Y4G8 1499 aa15.84■□□□□ 0.13
NEDD1-203ENST00000429527 CARMIL1Q5VZK9 1371 aa15.84■□□□□ 0.13
NEDD1-203ENST00000429527 CHIC1Q5VXU3 224 aa15.84■□□□□ 0.13
NEDD1-203ENST00000429527 EEA1Q15075 1411 aa15.84■□□□□ 0.13
NEDD1-203ENST00000429527 FBLN2P98095 1184 aa15.81■□□□□ 0.12
NEDD1-203ENST00000429527 MAPKBP1O60336 1514 aa15.78■□□□□ 0.12
NEDD1-203ENST00000429527 PRG4Q92954 1404 aaPredicted RBP15.78■□□□□ 0.12
NEDD1-203ENST00000429527 UHRF1BP1LA0JNW5 1464 aa15.78■□□□□ 0.12
NEDD1-203ENST00000429527 ADCY10Q96PN6 1610 aa15.75■□□□□ 0.11
NEDD1-203ENST00000429527 KIF21BO75037 1637 aa15.75■□□□□ 0.11
NEDD1-203ENST00000429527 KIAA0556O60303 1618 aa15.75■□□□□ 0.11
NEDD1-203ENST00000429527 DISP1Q96F81 1524 aa15.75■□□□□ 0.11
NEDD1-203ENST00000429527 JPH4Q96JJ6 628 aa15.72■□□□□ 0.11
NEDD1-203ENST00000429527 KIF13AQ9H1H9 1805 aa15.71■□□□□ 0.1
NEDD1-203ENST00000429527 SAMD9Q5K651 1589 aa15.7■□□□□ 0.1
NEDD1-203ENST00000429527 TRIM41Q8WV44 630 aa15.67■□□□□ 0.1
NEDD1-203ENST00000429527 CARMIL2Q6F5E8 1435 aa15.67■□□□□ 0.1
NEDD1-203ENST00000429527 GOLGA3Q08378 1498 aa15.66■□□□□ 0.1
NEDD1-203ENST00000429527 HRCP23327 699 aa15.66■□□□□ 0.1
NEDD1-203ENST00000429527 TNIKQ9UKE5 1360 aa15.66■□□□□ 0.1
NEDD1-203ENST00000429527 CYB5RLQ6IPT4 315 aa15.66■□□□□ 0.1
NEDD1-203ENST00000429527 GLI2P10070 1586 aa15.65■□□□□ 0.1
NEDD1-203ENST00000429527 ABCC2Q92887 1545 aa15.64■□□□□ 0.09
NEDD1-203ENST00000429527 ABCA8O94911 1581 aa15.63■□□□□ 0.09
NEDD1-203ENST00000429527 DIP2BQ9P265 1576 aa15.62■□□□□ 0.09
NEDD1-203ENST00000429527 KDM5BQ9UGL1 1544 aa15.61■□□□□ 0.09
NEDD1-203ENST00000429527 ABCC10Q5T3U5 1492 aa15.59■□□□□ 0.09
NEDD1-203ENST00000429527 EFCAB5A4FU69 1503 aa15.57■□□□□ 0.08
NEDD1-203ENST00000429527 ZCCHC11Q5TAX3 1644 aaKnown RBP15.56■□□□□ 0.08
NEDD1-203ENST00000429527 UACAQ9BZF9 1416 aa15.56■□□□□ 0.08
NEDD1-203ENST00000429527 PTPRGP23470 1445 aa15.55■□□□□ 0.08
NEDD1-203ENST00000429527 MAP3K4Q9Y6R4 1608 aa15.53■□□□□ 0.08
NEDD1-203ENST00000429527 PPRC1Q5VV67 1664 aaKnown RBP15.52■□□□□ 0.07
NEDD1-203ENST00000429527 CSRNP3Q8WYN3 585 aa15.52■□□□□ 0.07
NEDD1-203ENST00000429527 PLB1Q6P1J6 1458 aa15.51■□□□□ 0.07
NEDD1-203ENST00000429527 CFAP43Q8NDM7 1665 aa15.46■□□□□ 0.07
NEDD1-203ENST00000429527 RAPGEF6Q8TEU7 1601 aa15.46■□□□□ 0.07
NEDD1-203ENST00000429527 EPRSP07814 1512 aaKnown RBP15.42■□□□□ 0.06
NEDD1-203ENST00000429527 ASXL2Q76L83 1435 aa15.4■□□□□ 0.06
NEDD1-203ENST00000429527 WDR7Q9Y4E6 1490 aa15.39■□□□□ 0.05
NEDD1-203ENST00000429527 ABCA9Q8IUA7 1624 aa15.38■□□□□ 0.05
NEDD1-203ENST00000429527 MAGI3Q5TCQ9 1506 aa15.37■□□□□ 0.05
NEDD1-203ENST00000429527 NPM1P06748 294 aaKnown RBP eCLIP15.33■□□□□ 0.04
NEDD1-203ENST00000429527 ATP10BO94823 1461 aa15.32■□□□□ 0.04
NEDD1-203ENST00000429527 NUP153P49790 1475 aaKnown RBP15.32■□□□□ 0.04
NEDD1-203ENST00000429527 TEX14Q8IWB6 1497 aa15.31■□□□□ 0.04
NEDD1-203ENST00000429527 HECW1Q76N89 1606 aa15.3■□□□□ 0.04
NEDD1-203ENST00000429527 ARHGAP35Q9NRY4 1499 aa15.29■□□□□ 0.04
NEDD1-203ENST00000429527 KDM6BO15054 1643 aa15.28■□□□□ 0.04
NEDD1-203ENST00000429527 ARAP3Q8WWN8 1544 aa15.27■□□□□ 0.03
NEDD1-203ENST00000429527 LRRIQ1Q96JM4 1722 aa15.27■□□□□ 0.03
NEDD1-203ENST00000429527 CFAP74Q9C0B2 1584 aa15.26■□□□□ 0.03
NEDD1-203ENST00000429527 TRHP20396 242 aaPredicted RBP15.26■□□□□ 0.03
NEDD1-203ENST00000429527 FMN1Q68DA7 1419 aa15.25■□□□□ 0.03
NEDD1-203ENST00000429527 PHLDB1Q86UU1 1377 aa15.25■□□□□ 0.03
NEDD1-203ENST00000429527 TSPOAP1O95153 1857 aa15.23■□□□□ 0.03
NEDD1-203ENST00000429527 FHOD3Q2V2M9 1422 aa15.22■□□□□ 0.03
NEDD1-203ENST00000429527 FAM69CQ0P6D2 419 aa15.21■□□□□ 0.02
NEDD1-203ENST00000429527 NEO1Q92859 1461 aa15.2■□□□□ 0.02
NEDD1-203ENST00000429527 TRIM26Q12899 539 aaPredicted RBP15.19■□□□□ 0.02
NEDD1-203ENST00000429527 CASKIN1Q8WXD9 1431 aa15.18■□□□□ 0.02
NEDD1-203ENST00000429527 CCDC18Q5T9S5 1454 aa15.17■□□□□ 0.02
NEDD1-203ENST00000429527 FYCO1Q9BQS8 1478 aa15.17■□□□□ 0.02
NEDD1-203ENST00000429527 FAM9AQ8IZU1 332 aaPredicted RBP15.16■□□□□ 0.02
NEDD1-203ENST00000429527 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.15■□□□□ 0.02
NEDD1-203ENST00000429527 PCF11O94913 1555 aaKnown RBP15.15■□□□□ 0.02
NEDD1-203ENST00000429527 FRMPD1Q5SYB0 1578 aa15.14■□□□□ 0.01
NEDD1-203ENST00000429527 ZMYM4Q5VZL5 1548 aa15.14■□□□□ 0.01
NEDD1-203ENST00000429527 CD109Q6YHK3 1445 aa15.14■□□□□ 0.01
NEDD1-203ENST00000429527 RICTORQ6R327 1708 aa15.13■□□□□ 0.01
NEDD1-203ENST00000429527 MYO5CQ9NQX4 1742 aa15.13■□□□□ 0.01
NEDD1-203ENST00000429527 TTC37Q6PGP7 1564 aa15.12■□□□□ 0.01
NEDD1-203ENST00000429527 PCGF6Q9BYE7 350 aa15.12■□□□□ 0.01
NEDD1-203ENST00000429527 COL17A1Q9UMD9 1497 aaPredicted RBP15.11■□□□□ 0.01
NEDD1-203ENST00000429527 KIF14Q15058 1648 aa15.1■□□□□ 0.01
NEDD1-203ENST00000429527 PREX2Q70Z35 1606 aa15.08■□□□□ 0
NEDD1-203ENST00000429527 CDK13Q14004 1512 aaKnown RBP15.08■□□□□ 0
NEDD1-203ENST00000429527 ZEB1P37275 1124 aaPredicted RBP15.07■□□□□ 0
NEDD1-203ENST00000429527 TROQ12816 1431 aaPredicted RBP15.07■□□□□ 0
NEDD1-203ENST00000429527 MAP3K1Q13233 1512 aa15.04■□□□□ -0
NEDD1-203ENST00000429527 CLIP1P30622 1438 aa15.04■□□□□ -0
NEDD1-203ENST00000429527 PLCH2O75038 1416 aa15.03■□□□□ -0
NEDD1-203ENST00000429527 CDC42BPBQ9Y5S2 1711 aa15.03■□□□□ -0
NEDD1-203ENST00000429527 ARHGEF40Q8TER5 1519 aa15.03■□□□□ -0
NEDD1-203ENST00000429527 REREQ9P2R6 1566 aa15.03■□□□□ -0
NEDD1-203ENST00000429527 MAGI2Q86UL8 1455 aa15.02■□□□□ -0
NEDD1-203ENST00000429527 KDM5CP41229 1560 aa15.02□□□□□ -0.01
NEDD1-203ENST00000429527 CDC42BPAQ5VT25 1732 aa15.02□□□□□ -0.01
NEDD1-203ENST00000429527 LOC105371045A0A1W2PR82 267 aa15.02□□□□□ -0.01
NEDD1-203ENST00000429527 ITSN2Q9NZM3 1697 aa15□□□□□ -0.01
NEDD1-203ENST00000429527 UBTFP17480 764 aaKnown RBP14.98□□□□□ -0.01
NEDD1-203ENST00000429527 P3H3Q8IVL6 736 aa14.98□□□□□ -0.01
NEDD1-203ENST00000429527 ADAMTSL3P82987 1691 aa14.98□□□□□ -0.01
NEDD1-203ENST00000429527 EHBP1L1Q8N3D4 1523 aa14.97□□□□□ -0.01
NEDD1-203ENST00000429527 FANCAO15360 1455 aa14.97□□□□□ -0.01
NEDD1-203ENST00000429527 CEP162Q5TB80 1403 aa14.96□□□□□ -0.01
NEDD1-203ENST00000429527 AKNAQ7Z591 1439 aa14.96□□□□□ -0.01
NEDD1-203ENST00000429527 PLEKHD1A6NEE1 506 aa14.96□□□□□ -0.01
NEDD1-203ENST00000429527 ABCC1P33527 1531 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms