RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 JPH4Q96JJ6 628 aa30.96■■■□□ 2.55
SSR4P1-202ENST00000429427 PRG4Q92954 1404 aaPredicted RBP30.96■■■□□ 2.55
SSR4P1-202ENST00000429427 KIAA0586Q9BVV6 1533 aa30.94■■■□□ 2.54
SSR4P1-202ENST00000429427 RAPGEF2Q9Y4G8 1499 aa30.82■■■□□ 2.53
SSR4P1-202ENST00000429427 IQGAP2Q13576 1575 aa30.73■■■□□ 2.51
SSR4P1-202ENST00000429427 PRXQ9BXM0 1461 aa30.72■■■□□ 2.51
SSR4P1-202ENST00000429427 TRHP20396 242 aaPredicted RBP30.67■■■□□ 2.5
SSR4P1-202ENST00000429427 DISP1Q96F81 1524 aa30.61■■■□□ 2.49
SSR4P1-202ENST00000429427 UGGT2Q9NYU1 1516 aa30.58■■■□□ 2.49
SSR4P1-202ENST00000429427 ADCY10Q96PN6 1610 aa30.58■■■□□ 2.49
SSR4P1-202ENST00000429427 CARMIL2Q6F5E8 1435 aa30.55■■■□□ 2.48
SSR4P1-202ENST00000429427 CHIC1Q5VXU3 224 aa30.54■■■□□ 2.48
SSR4P1-202ENST00000429427 CTTNBP2Q8WZ74 1663 aa30.53■■■□□ 2.48
SSR4P1-202ENST00000429427 CSRNP3Q8WYN3 585 aa30.53■■■□□ 2.48
SSR4P1-202ENST00000429427 PTPRGP23470 1445 aa30.52■■■□□ 2.48
SSR4P1-202ENST00000429427 TNIKQ9UKE5 1360 aa30.52■■■□□ 2.48
SSR4P1-202ENST00000429427 EEA1Q15075 1411 aa30.48■■■□□ 2.47
SSR4P1-202ENST00000429427 KIAA0556O60303 1618 aa30.47■■■□□ 2.47
SSR4P1-202ENST00000429427 TTBK1Q5TCY1 1321 aaPredicted RBP30.44■■■□□ 2.46
SSR4P1-202ENST00000429427 MAPKBP1O60336 1514 aa30.39■■■□□ 2.46
SSR4P1-202ENST00000429427 FAM9AQ8IZU1 332 aaPredicted RBP30.39■■■□□ 2.46
SSR4P1-202ENST00000429427 KIF13AQ9H1H9 1805 aa30.34■■■□□ 2.45
SSR4P1-202ENST00000429427 UHRF1BP1LA0JNW5 1464 aa30.33■■■□□ 2.45
SSR4P1-202ENST00000429427 UACAQ9BZF9 1416 aa30.33■■■□□ 2.45
SSR4P1-202ENST00000429427 ABCC2Q92887 1545 aa30.32■■■□□ 2.44
SSR4P1-202ENST00000429427 NPM1P06748 294 aaKnown RBP eCLIP30.31■■■□□ 2.44
SSR4P1-202ENST00000429427 GOLGA3Q08378 1498 aa30.3■■■□□ 2.44
SSR4P1-202ENST00000429427 ABCC10Q5T3U5 1492 aa30.29■■■□□ 2.44
SSR4P1-202ENST00000429427 KIF21BO75037 1637 aa30.26■■■□□ 2.44
SSR4P1-202ENST00000429427 DIP2BQ9P265 1576 aa30.26■■■□□ 2.43
SSR4P1-202ENST00000429427 PLB1Q6P1J6 1458 aa30.23■■■□□ 2.43
SSR4P1-202ENST00000429427 KDM5BQ9UGL1 1544 aa30.21■■■□□ 2.43
SSR4P1-202ENST00000429427 SAMD9Q5K651 1589 aa30.2■■■□□ 2.43
SSR4P1-202ENST00000429427 FAM69CQ0P6D2 419 aa30.18■■■□□ 2.42
SSR4P1-202ENST00000429427 ABCA8O94911 1581 aa30.17■■■□□ 2.42
SSR4P1-202ENST00000429427 ASXL2Q76L83 1435 aa30.16■■■□□ 2.42
SSR4P1-202ENST00000429427 ZCCHC11Q5TAX3 1644 aaKnown RBP30.14■■■□□ 2.41
SSR4P1-202ENST00000429427 P3H3Q8IVL6 736 aa30.13■■■□□ 2.41
SSR4P1-202ENST00000429427 EHMT2Q96KQ7 1210 aa30.04■■■□□ 2.4
SSR4P1-202ENST00000429427 RANGAP1P46060 587 aaPredicted RBP30.03■■■□□ 2.4
SSR4P1-202ENST00000429427 GLI2P10070 1586 aa30.01■■■□□ 2.39
SSR4P1-202ENST00000429427 FHOD3Q2V2M9 1422 aa30■■■□□ 2.39
SSR4P1-202ENST00000429427 EPRSP07814 1512 aaKnown RBP30■■■□□ 2.39
SSR4P1-202ENST00000429427 WDR7Q9Y4E6 1490 aa29.96■■■□□ 2.39
SSR4P1-202ENST00000429427 EFCAB5A4FU69 1503 aa29.95■■■□□ 2.38
SSR4P1-202ENST00000429427 TSPOAP1O95153 1857 aa29.94■■■□□ 2.38
SSR4P1-202ENST00000429427 PPRC1Q5VV67 1664 aaKnown RBP29.93■■■□□ 2.38
SSR4P1-202ENST00000429427 UBTFP17480 764 aaKnown RBP29.92■■■□□ 2.38
SSR4P1-202ENST00000429427 RAPGEF6Q8TEU7 1601 aa29.91■■■□□ 2.38
SSR4P1-202ENST00000429427 ATP10BO94823 1461 aa29.91■■■□□ 2.38
SSR4P1-202ENST00000429427 ARID3CA6NKF2 412 aa29.89■■■□□ 2.38
SSR4P1-202ENST00000429427 MAP3K4Q9Y6R4 1608 aa29.88■■■□□ 2.37
SSR4P1-202ENST00000429427 NUP153P49790 1475 aaKnown RBP29.87■■■□□ 2.37
SSR4P1-202ENST00000429427 ARHGAP35Q9NRY4 1499 aa29.83■■■□□ 2.37
SSR4P1-202ENST00000429427 KDM6BO15054 1643 aa29.78■■■□□ 2.36
SSR4P1-202ENST00000429427 KCNH8Q96L42 1107 aa29.76■■■□□ 2.35
SSR4P1-202ENST00000429427 COL17A1Q9UMD9 1497 aaPredicted RBP29.71■■■□□ 2.35
SSR4P1-202ENST00000429427 CFAP43Q8NDM7 1665 aa29.69■■■□□ 2.34
SSR4P1-202ENST00000429427 CD109Q6YHK3 1445 aa29.68■■■□□ 2.34
SSR4P1-202ENST00000429427 TEX14Q8IWB6 1497 aa29.67■■■□□ 2.34
SSR4P1-202ENST00000429427 MAGI3Q5TCQ9 1506 aa29.66■■■□□ 2.34
SSR4P1-202ENST00000429427 FMN1Q68DA7 1419 aa29.64■■■□□ 2.34
SSR4P1-202ENST00000429427 CDK13Q14004 1512 aaKnown RBP29.63■■■□□ 2.33
SSR4P1-202ENST00000429427 ABCA9Q8IUA7 1624 aa29.63■■■□□ 2.33
SSR4P1-202ENST00000429427 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.62■■■□□ 2.33
SSR4P1-202ENST00000429427 HNRNPUL2Q1KMD3 747 aaKnown RBP29.62■■■□□ 2.33
SSR4P1-202ENST00000429427 HECW1Q76N89 1606 aa29.56■■■□□ 2.32
SSR4P1-202ENST00000429427 CLIP1P30622 1438 aa29.51■■■□□ 2.31
SSR4P1-202ENST00000429427 PLEKHD1A6NEE1 506 aa29.5■■■□□ 2.31
SSR4P1-202ENST00000429427 LRRIQ1Q96JM4 1722 aa29.49■■■□□ 2.31
SSR4P1-202ENST00000429427 PCF11O94913 1555 aaKnown RBP29.48■■■□□ 2.31
SSR4P1-202ENST00000429427 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.47■■■□□ 2.31
SSR4P1-202ENST00000429427 TTC37Q6PGP7 1564 aa29.45■■■□□ 2.31
SSR4P1-202ENST00000429427 ATP1B4Q9UN42 357 aaPredicted RBP29.45■■■□□ 2.31
SSR4P1-202ENST00000429427 CASKIN1Q8WXD9 1431 aa29.44■■■□□ 2.3
SSR4P1-202ENST00000429427 ARAP3Q8WWN8 1544 aa29.42■■■□□ 2.3
SSR4P1-202ENST00000429427 NEO1Q92859 1461 aa29.38■■■□□ 2.29
SSR4P1-202ENST00000429427 FYCO1Q9BQS8 1478 aa29.35■■■□□ 2.29
SSR4P1-202ENST00000429427 KIF14Q15058 1648 aa29.34■■■□□ 2.29
SSR4P1-202ENST00000429427 CEP162Q5TB80 1403 aa29.34■■■□□ 2.29
SSR4P1-202ENST00000429427 PHLDB1Q86UU1 1377 aa29.33■■■□□ 2.29
SSR4P1-202ENST00000429427 TROQ12816 1431 aaPredicted RBP29.33■■■□□ 2.29
SSR4P1-202ENST00000429427 CCDC18Q5T9S5 1454 aa29.3■■■□□ 2.28
SSR4P1-202ENST00000429427 KDM4FA0A1W2PPD8 638 aa29.3■■■□□ 2.28
SSR4P1-202ENST00000429427 LOC105371045A0A1W2PR82 267 aa29.3■■■□□ 2.28
SSR4P1-202ENST00000429427 FRMPD1Q5SYB0 1578 aa29.3■■■□□ 2.28
SSR4P1-202ENST00000429427 FANCAO15360 1455 aa29.29■■■□□ 2.28
SSR4P1-202ENST00000429427 CDK11AQ9UQ88 783 aaPredicted RBP29.27■■■□□ 2.28
SSR4P1-202ENST00000429427 RAPGEF3O95398 923 aa29.26■■■□□ 2.27
SSR4P1-202ENST00000429427 AEBP2Q6ZN18 517 aaPredicted RBP29.25■■■□□ 2.27
SSR4P1-202ENST00000429427 PLCH2O75038 1416 aa29.25■■■□□ 2.27
SSR4P1-202ENST00000429427 AKNAQ7Z591 1439 aa29.25■■■□□ 2.27
SSR4P1-202ENST00000429427 CFAP74Q9C0B2 1584 aa29.21■■■□□ 2.27
SSR4P1-202ENST00000429427 ADGRL1O94910 1474 aa29.18■■■□□ 2.26
SSR4P1-202ENST00000429427 MYO5CQ9NQX4 1742 aa29.18■■■□□ 2.26
SSR4P1-202ENST00000429427 RICTORQ6R327 1708 aa29.17■■■□□ 2.26
SSR4P1-202ENST00000429427 DENND4BO75064 1496 aaPredicted RBP29.16■■■□□ 2.26
SSR4P1-202ENST00000429427 SCAPERQ9BY12 1400 aa29.08■■■□□ 2.25
SSR4P1-202ENST00000429427 ARHGAP5Q13017 1502 aa29.08■■■□□ 2.25
SSR4P1-202ENST00000429427 CDC42BPBQ9Y5S2 1711 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms