RNA–Protein interactions for RNA: ENST00000428797.7

GABRA1-203, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-203ENST00000428797 ZNF326Q5BKZ1 582 aaKnown RBP12.95□□□□□ -0.34
GABRA1-203ENST00000428797 SIN3AQ96ST3 1273 aa12.94□□□□□ -0.34
GABRA1-203ENST00000428797 ARHGAP35Q9NRY4 1499 aa12.93□□□□□ -0.34
GABRA1-203ENST00000428797 CHIC2Q9UKJ5 165 aa12.92□□□□□ -0.34
GABRA1-203ENST00000428797 ERICH3Q5RHP9 1530 aa12.91□□□□□ -0.34
GABRA1-203ENST00000428797 HIRIP3Q9BW71 556 aaPredicted RBP12.9□□□□□ -0.34
GABRA1-203ENST00000428797 FAM9BQ8IZU0 186 aa12.89□□□□□ -0.35
GABRA1-203ENST00000428797 MRS2Q9HD23 443 aa12.89□□□□□ -0.35
GABRA1-203ENST00000428797 ANP32EQ9BTT0 268 aa12.88□□□□□ -0.35
GABRA1-203ENST00000428797 SYNJ1O43426 1573 aa12.88□□□□□ -0.35
GABRA1-203ENST00000428797 ANP32AP39687 249 aaKnown RBP12.88□□□□□ -0.35
GABRA1-203ENST00000428797 FMN1Q68DA7 1419 aa12.88□□□□□ -0.35
GABRA1-203ENST00000428797 ARID3CA6NKF2 412 aa12.87□□□□□ -0.35
GABRA1-203ENST00000428797 RRP7BPQ9NSQ0 103 aa12.87□□□□□ -0.35
GABRA1-203ENST00000428797 CADPSQ9ULU8 1353 aa12.86□□□□□ -0.35
GABRA1-203ENST00000428797 PPP1R15AO75807 674 aaPredicted RBP12.85□□□□□ -0.35
GABRA1-203ENST00000428797 ZNF777Q9ULD5 760 aaPredicted RBP12.85□□□□□ -0.35
GABRA1-203ENST00000428797 NCAPD3P42695 1498 aa12.83□□□□□ -0.36
GABRA1-203ENST00000428797 SLC4A1APQ9BWU0 796 aaKnown RBP12.82□□□□□ -0.36
GABRA1-203ENST00000428797 RRBP1Q9P2E9 1410 aaKnown RBP12.82□□□□□ -0.36
GABRA1-203ENST00000428797 FBLN2P98095 1184 aa12.82□□□□□ -0.36
GABRA1-203ENST00000428797 TOP2BQ02880 1626 aa12.82□□□□□ -0.36
GABRA1-203ENST00000428797 PRXQ9BXM0 1461 aa12.82□□□□□ -0.36
GABRA1-203ENST00000428797 ERICH6BQ5W0A0 696 aa12.81□□□□□ -0.36
GABRA1-203ENST00000428797 TMC1Q8TDI8 760 aa12.81□□□□□ -0.36
GABRA1-203ENST00000428797 EIF4G1Q04637 1599 aaKnown RBP12.79□□□□□ -0.36
GABRA1-203ENST00000428797 CCDC136Q96JN2 1154 aa12.78□□□□□ -0.36
GABRA1-203ENST00000428797 PPP4R2Q9NY27 417 aa12.78□□□□□ -0.36
GABRA1-203ENST00000428797 IGF1RP08069 1367 aa12.78□□□□□ -0.36
GABRA1-203ENST00000428797 TSPY4P0CV99 314 aa12.78□□□□□ -0.36
GABRA1-203ENST00000428797 TSPY10P0CW01 314 aa12.78□□□□□ -0.36
GABRA1-203ENST00000428797 PEG3Q9GZU2 1588 aa12.78□□□□□ -0.36
GABRA1-203ENST00000428797 ARAP1Q96P48 1450 aa12.75□□□□□ -0.37
GABRA1-203ENST00000428797 TSHZ2Q9NRE2 1034 aa12.74□□□□□ -0.37
GABRA1-203ENST00000428797 IRX6P78412 446 aaPredicted RBP12.73□□□□□ -0.37
GABRA1-203ENST00000428797 FHOD3Q2V2M9 1422 aa12.73□□□□□ -0.37
GABRA1-203ENST00000428797 CFTRP13569 1480 aa12.72□□□□□ -0.37
GABRA1-203ENST00000428797 LRRC9Q6ZRR7 1453 aa12.72□□□□□ -0.37
GABRA1-203ENST00000428797 HMGXB3Q12766 1538 aa12.71□□□□□ -0.37
GABRA1-203ENST00000428797 HSPA5P11021 654 aaKnown RBP12.71□□□□□ -0.37
GABRA1-203ENST00000428797 CFDP1Q9UEE9 299 aaPredicted RBP12.71□□□□□ -0.37
GABRA1-203ENST00000428797 ZBTB47Q9UFB7 747 aaPredicted RBP12.7□□□□□ -0.38
GABRA1-203ENST00000428797 PDS5BQ9NTI5 1447 aa12.69□□□□□ -0.38
GABRA1-203ENST00000428797 CHMP7Q8WUX9 453 aaPredicted RBP12.69□□□□□ -0.38
GABRA1-203ENST00000428797 RBM19Q9Y4C8 960 aaKnown RBP12.69□□□□□ -0.38
GABRA1-203ENST00000428797 PLEKHD1A6NEE1 506 aa12.69□□□□□ -0.38
GABRA1-203ENST00000428797 FGD5Q6ZNL6 1462 aa12.69□□□□□ -0.38
GABRA1-203ENST00000428797 BICRAQ9NZM4 1560 aa12.68□□□□□ -0.38
GABRA1-203ENST00000428797 FANCD2Q9BXW9 1451 aa12.67□□□□□ -0.38
GABRA1-203ENST00000428797 MPHOSPH9Q99550 1183 aa12.66□□□□□ -0.38
GABRA1-203ENST00000428797 PHLDB1Q86UU1 1377 aa12.66□□□□□ -0.38
GABRA1-203ENST00000428797 CCDC18Q5T9S5 1454 aa12.65□□□□□ -0.38
GABRA1-203ENST00000428797 CUX1P39880 1505 aa12.65□□□□□ -0.38
GABRA1-203ENST00000428797 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.65□□□□□ -0.39
GABRA1-203ENST00000428797 CASKIN1Q8WXD9 1431 aa12.64□□□□□ -0.39
GABRA1-203ENST00000428797 KDM2AQ9Y2K7 1162 aa12.64□□□□□ -0.39
GABRA1-203ENST00000428797 TDRD9Q8NDG6 1382 aaKnown RBP12.64□□□□□ -0.39
GABRA1-203ENST00000428797 MAP3K1Q13233 1512 aa12.63□□□□□ -0.39
GABRA1-203ENST00000428797 FGD6Q6ZV73 1430 aa12.63□□□□□ -0.39
GABRA1-203ENST00000428797 CARD11Q9BXL7 1154 aa12.63□□□□□ -0.39
GABRA1-203ENST00000428797 NPM2Q86SE8 214 aaKnown RBP12.62□□□□□ -0.39
GABRA1-203ENST00000428797 UACAQ9BZF9 1416 aa12.62□□□□□ -0.39
GABRA1-203ENST00000428797 FYCO1Q9BQS8 1478 aa12.62□□□□□ -0.39
GABRA1-203ENST00000428797 TIAM1Q13009 1591 aa12.62□□□□□ -0.39
GABRA1-203ENST00000428797 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.62□□□□□ -0.39
GABRA1-203ENST00000428797 KCNH8Q96L42 1107 aa12.61□□□□□ -0.39
GABRA1-203ENST00000428797 EFCAB5A4FU69 1503 aa12.61□□□□□ -0.39
GABRA1-203ENST00000428797 CANXP27824 592 aaKnown RBP12.61□□□□□ -0.39
GABRA1-203ENST00000428797 BIVM-ERCC5R4GMW8 1640 aa12.6□□□□□ -0.39
GABRA1-203ENST00000428797 L3MBTL2Q969R5 705 aa12.59□□□□□ -0.39
GABRA1-203ENST00000428797 UNC13AQ9UPW8 1703 aa12.59□□□□□ -0.39
GABRA1-203ENST00000428797 WDR43Q15061 677 aaKnown RBP eCLIP12.59□□□□□ -0.39
GABRA1-203ENST00000428797 MYOM3Q5VTT5 1437 aa12.58□□□□□ -0.39
GABRA1-203ENST00000428797 SALL2Q9Y467 1007 aaPredicted RBP12.57□□□□□ -0.4
GABRA1-203ENST00000428797 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.56□□□□□ -0.4
GABRA1-203ENST00000428797 CDCA8Q53HL2 280 aa12.56□□□□□ -0.4
GABRA1-203ENST00000428797 DDRGK1Q96HY6 314 aa12.56□□□□□ -0.4
GABRA1-203ENST00000428797 B4GALNT3Q6L9W6 998 aa12.55□□□□□ -0.4
GABRA1-203ENST00000428797 ROCK2O75116 1388 aaKnown RBP12.54□□□□□ -0.4
GABRA1-203ENST00000428797 NBR1Q14596 966 aa12.54□□□□□ -0.4
GABRA1-203ENST00000428797 NOP58Q9Y2X3 529 aaKnown RBP12.54□□□□□ -0.4
GABRA1-203ENST00000428797 ANKRD30AQ9BXX3 1397 aa12.54□□□□□ -0.4
GABRA1-203ENST00000428797 PKD2Q13563 968 aa12.52□□□□□ -0.41
GABRA1-203ENST00000428797 GAPVD1Q14C86 1478 aa12.52□□□□□ -0.41
GABRA1-203ENST00000428797 RALBP1Q15311 655 aa12.52□□□□□ -0.41
GABRA1-203ENST00000428797 RAD54L2Q9Y4B4 1467 aa12.52□□□□□ -0.41
GABRA1-203ENST00000428797 CARMIL2Q6F5E8 1435 aa12.52□□□□□ -0.41
GABRA1-203ENST00000428797 PRKRIP1Q9H875 184 aaPredicted RBP12.51□□□□□ -0.41
GABRA1-203ENST00000428797 HFM1A2PYH4 1435 aa12.51□□□□□ -0.41
GABRA1-203ENST00000428797 ZBED9Q6R2W3 1325 aa12.51□□□□□ -0.41
GABRA1-203ENST00000428797 FOXD1Q16676 465 aa12.51□□□□□ -0.41
GABRA1-203ENST00000428797 AQRO60306 1485 aaKnown RBP eCLIP12.5□□□□□ -0.41
GABRA1-203ENST00000428797 NCOA2Q15596 1464 aa12.5□□□□□ -0.41
GABRA1-203ENST00000428797 NUDCQ9Y266 331 aa12.5□□□□□ -0.41
GABRA1-203ENST00000428797 UPF2Q9HAU5 1272 aaKnown RBP12.5□□□□□ -0.41
GABRA1-203ENST00000428797 PPM1GO15355 546 aaPredicted RBP12.49□□□□□ -0.41
GABRA1-203ENST00000428797 SLC24A1O60721 1099 aa12.49□□□□□ -0.41
GABRA1-203ENST00000428797 FANCIQ9NVI1 1328 aa12.48□□□□□ -0.41
GABRA1-203ENST00000428797 RGL3Q3MIN7 710 aa12.48□□□□□ -0.41
GABRA1-203ENST00000428797 DCAF11Q8TEB1 546 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms