RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 KIF27Q86VH2 1401 aa27.18■■□□□ 1.94
SEC13-210ENST00000428626 CUL7Q14999 1698 aa27.11■■□□□ 1.93
SEC13-210ENST00000428626 KIAA0586Q9BVV6 1533 aa27.07■■□□□ 1.92
SEC13-210ENST00000428626 CARMIL1Q5VZK9 1371 aa27.02■■□□□ 1.92
SEC13-210ENST00000428626 KIF13AQ9H1H9 1805 aa26.96■■□□□ 1.91
SEC13-210ENST00000428626 ADCY10Q96PN6 1610 aa26.94■■□□□ 1.9
SEC13-210ENST00000428626 MAPKBP1O60336 1514 aa26.84■■□□□ 1.89
SEC13-210ENST00000428626 ABCC10Q5T3U5 1492 aa26.82■■□□□ 1.88
SEC13-210ENST00000428626 IQGAP2Q13576 1575 aa26.82■■□□□ 1.88
SEC13-210ENST00000428626 NPM1P06748 294 aaKnown RBP eCLIP26.8■■□□□ 1.88
SEC13-210ENST00000428626 PTPRGP23470 1445 aa26.8■■□□□ 1.88
SEC13-210ENST00000428626 FAM69CQ0P6D2 419 aa26.78■■□□□ 1.88
SEC13-210ENST00000428626 DIP2BQ9P265 1576 aa26.78■■□□□ 1.88
SEC13-210ENST00000428626 RAPGEF2Q9Y4G8 1499 aa26.77■■□□□ 1.88
SEC13-210ENST00000428626 TTBK1Q5TCY1 1321 aaPredicted RBP26.77■■□□□ 1.88
SEC13-210ENST00000428626 TNIKQ9UKE5 1360 aa26.75■■□□□ 1.87
SEC13-210ENST00000428626 DISP1Q96F81 1524 aa26.75■■□□□ 1.87
SEC13-210ENST00000428626 CARMIL2Q6F5E8 1435 aa26.73■■□□□ 1.87
SEC13-210ENST00000428626 UGGT2Q9NYU1 1516 aa26.68■■□□□ 1.86
SEC13-210ENST00000428626 ABCC2Q92887 1545 aa26.65■■□□□ 1.86
SEC13-210ENST00000428626 UHRF1BP1LA0JNW5 1464 aa26.62■■□□□ 1.85
SEC13-210ENST00000428626 UACAQ9BZF9 1416 aa26.6■■□□□ 1.85
SEC13-210ENST00000428626 KIAA0556O60303 1618 aa26.6■■□□□ 1.85
SEC13-210ENST00000428626 TSPOAP1O95153 1857 aa26.58■■□□□ 1.85
SEC13-210ENST00000428626 ASXL2Q76L83 1435 aa26.56■■□□□ 1.84
SEC13-210ENST00000428626 PRXQ9BXM0 1461 aa26.56■■□□□ 1.84
SEC13-210ENST00000428626 CTTNBP2Q8WZ74 1663 aa26.55■■□□□ 1.84
SEC13-210ENST00000428626 AEBP2Q6ZN18 517 aaPredicted RBP26.55■■□□□ 1.84
SEC13-210ENST00000428626 KDM5BQ9UGL1 1544 aa26.51■■□□□ 1.83
SEC13-210ENST00000428626 PLB1Q6P1J6 1458 aa26.51■■□□□ 1.83
SEC13-210ENST00000428626 KDM6BO15054 1643 aa26.48■■□□□ 1.83
SEC13-210ENST00000428626 GLI2P10070 1586 aa26.47■■□□□ 1.83
SEC13-210ENST00000428626 PPRC1Q5VV67 1664 aaKnown RBP26.47■■□□□ 1.83
SEC13-210ENST00000428626 ZCCHC11Q5TAX3 1644 aaKnown RBP26.46■■□□□ 1.83
SEC13-210ENST00000428626 EPRSP07814 1512 aaKnown RBP26.41■■□□□ 1.82
SEC13-210ENST00000428626 GOLGA3Q08378 1498 aa26.39■■□□□ 1.82
SEC13-210ENST00000428626 ABCA8O94911 1581 aa26.37■■□□□ 1.81
SEC13-210ENST00000428626 MAP3K4Q9Y6R4 1608 aa26.35■■□□□ 1.81
SEC13-210ENST00000428626 CSRNP3Q8WYN3 585 aa26.34■■□□□ 1.81
SEC13-210ENST00000428626 COL17A1Q9UMD9 1497 aaPredicted RBP26.31■■□□□ 1.8
SEC13-210ENST00000428626 WDR7Q9Y4E6 1490 aa26.3■■□□□ 1.8
SEC13-210ENST00000428626 P3H3Q8IVL6 736 aa26.27■■□□□ 1.8
SEC13-210ENST00000428626 KDM4FA0A1W2PPD8 638 aa26.26■■□□□ 1.79
SEC13-210ENST00000428626 SAMD9Q5K651 1589 aa26.21■■□□□ 1.79
SEC13-210ENST00000428626 TEX14Q8IWB6 1497 aa26.18■■□□□ 1.78
SEC13-210ENST00000428626 EEA1Q15075 1411 aa26.18■■□□□ 1.78
SEC13-210ENST00000428626 ARID3CA6NKF2 412 aa26.17■■□□□ 1.78
SEC13-210ENST00000428626 KCNH8Q96L42 1107 aa26.17■■□□□ 1.78
SEC13-210ENST00000428626 FAM9AQ8IZU1 332 aaPredicted RBP26.16■■□□□ 1.78
SEC13-210ENST00000428626 ATP10BO94823 1461 aa26.16■■□□□ 1.78
SEC13-210ENST00000428626 CD109Q6YHK3 1445 aa26.13■■□□□ 1.77
SEC13-210ENST00000428626 CFAP43Q8NDM7 1665 aa26.12■■□□□ 1.77
SEC13-210ENST00000428626 MAGI3Q5TCQ9 1506 aa26.11■■□□□ 1.77
SEC13-210ENST00000428626 RANGAP1P46060 587 aaPredicted RBP26.08■■□□□ 1.77
SEC13-210ENST00000428626 RAPGEF6Q8TEU7 1601 aa26.07■■□□□ 1.76
SEC13-210ENST00000428626 FHOD3Q2V2M9 1422 aa26.05■■□□□ 1.76
SEC13-210ENST00000428626 KIF21BO75037 1637 aa26.04■■□□□ 1.76
SEC13-210ENST00000428626 ADGRL1O94910 1474 aa26.03■■□□□ 1.76
SEC13-210ENST00000428626 NUP153P49790 1475 aaKnown RBP26.02■■□□□ 1.76
SEC13-210ENST00000428626 CHIC1Q5VXU3 224 aa25.98■■□□□ 1.75
SEC13-210ENST00000428626 ABCA9Q8IUA7 1624 aa25.98■■□□□ 1.75
SEC13-210ENST00000428626 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.91■■□□□ 1.74
SEC13-210ENST00000428626 HNRNPUL2Q1KMD3 747 aaKnown RBP25.91■■□□□ 1.74
SEC13-210ENST00000428626 EHMT2Q96KQ7 1210 aa25.91■■□□□ 1.74
SEC13-210ENST00000428626 ARAP3Q8WWN8 1544 aa25.91■■□□□ 1.74
SEC13-210ENST00000428626 EFCAB5A4FU69 1503 aa25.9■■□□□ 1.74
SEC13-210ENST00000428626 UBTFP17480 764 aaKnown RBP25.8■■□□□ 1.72
SEC13-210ENST00000428626 NEO1Q92859 1461 aa25.79■■□□□ 1.72
SEC13-210ENST00000428626 RAPGEF3O95398 923 aa25.79■■□□□ 1.72
SEC13-210ENST00000428626 PHLDB1Q86UU1 1377 aa25.79■■□□□ 1.72
SEC13-210ENST00000428626 CDK13Q14004 1512 aaKnown RBP25.78■■□□□ 1.72
SEC13-210ENST00000428626 PLEKHD1A6NEE1 506 aa25.78■■□□□ 1.72
SEC13-210ENST00000428626 ARHGAP35Q9NRY4 1499 aa25.78■■□□□ 1.72
SEC13-210ENST00000428626 FRMPD1Q5SYB0 1578 aa25.77■■□□□ 1.72
SEC13-210ENST00000428626 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.75■■□□□ 1.714e-7■■■■□ 22.2
SEC13-210ENST00000428626 TTC37Q6PGP7 1564 aa25.73■■□□□ 1.71
SEC13-210ENST00000428626 FMN1Q68DA7 1419 aa25.66■■□□□ 1.7
SEC13-210ENST00000428626 AKNAQ7Z591 1439 aa25.66■■□□□ 1.7
SEC13-210ENST00000428626 FANCAO15360 1455 aa25.66■■□□□ 1.7
SEC13-210ENST00000428626 RICTORQ6R327 1708 aa25.65■■□□□ 1.7
SEC13-210ENST00000428626 HECW2Q9P2P5 1572 aa25.65■■□□□ 1.7
SEC13-210ENST00000428626 HECW1Q76N89 1606 aa25.64■■□□□ 1.7
SEC13-210ENST00000428626 DENND4BO75064 1496 aaPredicted RBP25.62■■□□□ 1.69
SEC13-210ENST00000428626 ATP1B4Q9UN42 357 aaPredicted RBP25.62■■□□□ 1.69
SEC13-210ENST00000428626 ADAMTSL3P82987 1691 aa25.61■■□□□ 1.69
SEC13-210ENST00000428626 LRRIQ1Q96JM4 1722 aa25.6■■□□□ 1.69
SEC13-210ENST00000428626 CFAP74Q9C0B2 1584 aa25.59■■□□□ 1.69
SEC13-210ENST00000428626 ARHGEF40Q8TER5 1519 aa25.57■■□□□ 1.68
SEC13-210ENST00000428626 PLCH2O75038 1416 aa25.56■■□□□ 1.68
SEC13-210ENST00000428626 KIF14Q15058 1648 aa25.55■■□□□ 1.68
SEC13-210ENST00000428626 BCORL1Q5H9F3 1711 aa25.54■■□□□ 1.68
SEC13-210ENST00000428626 ZMYM4Q5VZL5 1548 aa25.53■■□□□ 1.68
SEC13-210ENST00000428626 YEATS2Q9ULM3 1422 aa25.52■■□□□ 1.68
SEC13-210ENST00000428626 PTPRMP28827 1452 aa25.52■■□□□ 1.68
SEC13-210ENST00000428626 SIGLEC1Q9BZZ2 1709 aa25.51■■□□□ 1.67
SEC13-210ENST00000428626 TROQ12816 1431 aaPredicted RBP25.5■■□□□ 1.67
SEC13-210ENST00000428626 MADDQ8WXG6 1647 aa25.5■■□□□ 1.67
SEC13-210ENST00000428626 SCAPERQ9BY12 1400 aa25.49■■□□□ 1.67
SEC13-210ENST00000428626 ARID4BQ4LE39 1312 aaPredicted RBP25.49■■□□□ 1.67
SEC13-210ENST00000428626 MYO5CQ9NQX4 1742 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms