RNA–Protein interactions for RNA: ENST00000428425.1

NCBP2-205, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 2,220 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-205ENST00000428425 GAPVD1Q14C86 1478 aa21.07■□□□□ 0.96
NCBP2-205ENST00000428425 P3H3Q8IVL6 736 aa21.05■□□□□ 0.96
NCBP2-205ENST00000428425 CTTNBP2Q8WZ74 1663 aa21.01■□□□□ 0.95
NCBP2-205ENST00000428425 FHOD3Q2V2M9 1422 aa20.99■□□□□ 0.95
NCBP2-205ENST00000428425 DNAJC5Q9H3Z4 198 aa20.96■□□□□ 0.95
NCBP2-205ENST00000428425 PCF11O94913 1555 aaKnown RBP20.96■□□□□ 0.95
NCBP2-205ENST00000428425 TIAM1Q13009 1591 aa20.95■□□□□ 0.94
NCBP2-205ENST00000428425 AQRO60306 1485 aaKnown RBP eCLIP20.94■□□□□ 0.946e-6■□□□□ 8.5
NCBP2-205ENST00000428425 EFCAB5A4FU69 1503 aa20.91■□□□□ 0.94
NCBP2-205ENST00000428425 PBRM1Q86U86 1689 aa20.91■□□□□ 0.94
NCBP2-205ENST00000428425 RRBP1Q9P2E9 1410 aaKnown RBP20.9■□□□□ 0.94
NCBP2-205ENST00000428425 FHAD1B1AJZ9 1412 aa20.9■□□□□ 0.94
NCBP2-205ENST00000428425 MAP3K1Q13233 1512 aa20.88■□□□□ 0.93
NCBP2-205ENST00000428425 ZNF608Q9ULD9 1512 aaPredicted RBP20.87■□□□□ 0.93
NCBP2-205ENST00000428425 LRRC9Q6ZRR7 1453 aa20.86■□□□□ 0.93
NCBP2-205ENST00000428425 CFAP43Q8NDM7 1665 aa20.85■□□□□ 0.93
NCBP2-205ENST00000428425 ATP1B4Q9UN42 357 aaPredicted RBP20.85■□□□□ 0.93
NCBP2-205ENST00000428425 SAMD9Q5K651 1589 aa20.83■□□□□ 0.93
NCBP2-205ENST00000428425 CCNB3Q8WWL7 1395 aa20.82■□□□□ 0.92
NCBP2-205ENST00000428425 ADAMTS12P58397 1594 aa20.82■□□□□ 0.92
NCBP2-205ENST00000428425 FYCO1Q9BQS8 1478 aa20.81■□□□□ 0.92
NCBP2-205ENST00000428425 CASKIN1Q8WXD9 1431 aa20.81■□□□□ 0.92
NCBP2-205ENST00000428425 IFT140Q96RY7 1462 aa20.8■□□□□ 0.92
NCBP2-205ENST00000428425 PHLDB1Q86UU1 1377 aa20.79■□□□□ 0.92
NCBP2-205ENST00000428425 GRIN2BQ13224 1484 aa20.78■□□□□ 0.92
NCBP2-205ENST00000428425 SNAPC4Q5SXM2 1469 aa20.78■□□□□ 0.92
NCBP2-205ENST00000428425 FMN1Q68DA7 1419 aa20.75■□□□□ 0.91
NCBP2-205ENST00000428425 ITGAEP38570 1179 aa20.74■□□□□ 0.91
NCBP2-205ENST00000428425 LRRIQ1Q96JM4 1722 aa20.73■□□□□ 0.91
NCBP2-205ENST00000428425 EIF4G3O43432 1585 aaKnown RBP20.72■□□□□ 0.91
NCBP2-205ENST00000428425 IQGAP2Q13576 1575 aa20.69■□□□□ 0.9
NCBP2-205ENST00000428425 DHX57Q6P158 1386 aaKnown RBP20.68■□□□□ 0.9
NCBP2-205ENST00000428425 FAM50AQ14320 339 aaKnown RBP20.62■□□□□ 0.89
NCBP2-205ENST00000428425 GRIN2AQ12879 1464 aa20.59■□□□□ 0.89
NCBP2-205ENST00000428425 MTUS2Q5JR59 1369 aa20.57■□□□□ 0.88
NCBP2-205ENST00000428425 RAB3GAP2Q9H2M9 1393 aa20.56■□□□□ 0.88
NCBP2-205ENST00000428425 UGGT2Q9NYU1 1516 aa20.56■□□□□ 0.88
NCBP2-205ENST00000428425 MAGI3Q5TCQ9 1506 aa20.56■□□□□ 0.88
NCBP2-205ENST00000428425 OSCARQ8IYS5 282 aa20.54■□□□□ 0.88
NCBP2-205ENST00000428425 KIAA0586Q9BVV6 1533 aa20.54■□□□□ 0.88
NCBP2-205ENST00000428425 DISP1Q96F81 1524 aa20.52■□□□□ 0.88
NCBP2-205ENST00000428425 FGD6Q6ZV73 1430 aa20.52■□□□□ 0.88
NCBP2-205ENST00000428425 NCOA2Q15596 1464 aa20.52■□□□□ 0.87
NCBP2-205ENST00000428425 MAGI1Q96QZ7 1491 aaPredicted RBP20.52■□□□□ 0.87
NCBP2-205ENST00000428425 HECW1Q76N89 1606 aa20.5■□□□□ 0.87
NCBP2-205ENST00000428425 ARID3CA6NKF2 412 aa20.5■□□□□ 0.87
NCBP2-205ENST00000428425 CLSPNQ9HAW4 1339 aa20.5■□□□□ 0.87
NCBP2-205ENST00000428425 KIAA0556O60303 1618 aa20.49■□□□□ 0.87
NCBP2-205ENST00000428425 CDK13Q14004 1512 aaKnown RBP20.49■□□□□ 0.87
NCBP2-205ENST00000428425 CEP170Q5SW79 1584 aa20.49■□□□□ 0.87
NCBP2-205ENST00000428425 SETD5Q9C0A6 1442 aa20.49■□□□□ 0.87
NCBP2-205ENST00000428425 EHBP1L1Q8N3D4 1523 aa20.49■□□□□ 0.87
NCBP2-205ENST00000428425 SYNJ2O15056 1496 aa20.48■□□□□ 0.87
NCBP2-205ENST00000428425 EPRSP07814 1512 aaKnown RBP20.48■□□□□ 0.87
NCBP2-205ENST00000428425 ZNF316A6NFI3 1004 aaPredicted RBP20.47■□□□□ 0.87
NCBP2-205ENST00000428425 FBLN2P98095 1184 aa20.47■□□□□ 0.87
NCBP2-205ENST00000428425 DIEXFQ68CQ4 756 aaKnown RBP20.47■□□□□ 0.87
NCBP2-205ENST00000428425 CHMP7Q8WUX9 453 aaPredicted RBP20.47■□□□□ 0.87
NCBP2-205ENST00000428425 CCDC18Q5T9S5 1454 aa20.47■□□□□ 0.87
NCBP2-205ENST00000428425 SUPT6HQ7KZ85 1726 aaKnown RBP20.47■□□□□ 0.87
NCBP2-205ENST00000428425 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.45■□□□□ 0.86
NCBP2-205ENST00000428425 MYOM3Q5VTT5 1437 aa20.44■□□□□ 0.86
NCBP2-205ENST00000428425 MAPKBP1O60336 1514 aa20.44■□□□□ 0.86
NCBP2-205ENST00000428425 ARHGEF11O15085 1522 aa20.43■□□□□ 0.86
NCBP2-205ENST00000428425 PTPRKQ15262 1439 aa20.43■□□□□ 0.86
NCBP2-205ENST00000428425 NUP160Q12769 1436 aa20.38■□□□□ 0.85
NCBP2-205ENST00000428425 NUP153P49790 1475 aaKnown RBP20.37■□□□□ 0.85
NCBP2-205ENST00000428425 PTPN23Q9H3S7 1636 aa20.36■□□□□ 0.85
NCBP2-205ENST00000428425 RAPGEF6Q8TEU7 1601 aa20.34■□□□□ 0.85
NCBP2-205ENST00000428425 PLB1Q6P1J6 1458 aa20.31■□□□□ 0.84
NCBP2-205ENST00000428425 JPH4Q96JJ6 628 aa20.3■□□□□ 0.84
NCBP2-205ENST00000428425 TCOF1Q13428 1488 aaKnown RBP20.28■□□□□ 0.84
NCBP2-205ENST00000428425 HFM1A2PYH4 1435 aa20.28■□□□□ 0.84
NCBP2-205ENST00000428425 SIN3AQ96ST3 1273 aa20.27■□□□□ 0.84
NCBP2-205ENST00000428425 NAIPQ13075 1403 aa20.26■□□□□ 0.83
NCBP2-205ENST00000428425 CARMIL2Q6F5E8 1435 aa20.23■□□□□ 0.83
NCBP2-205ENST00000428425 CHIC2Q9UKJ5 165 aa20.22■□□□□ 0.83
NCBP2-205ENST00000428425 PRG4Q92954 1404 aaPredicted RBP20.22■□□□□ 0.83
NCBP2-205ENST00000428425 MIA2Q96PC5 1412 aa20.21■□□□□ 0.83
NCBP2-205ENST00000428425 NEUROD1Q13562 356 aa20.21■□□□□ 0.83
NCBP2-205ENST00000428425 CHD1O14646 1710 aa20.2■□□□□ 0.82
NCBP2-205ENST00000428425 RRP7BPQ9NSQ0 103 aa20.19■□□□□ 0.82
NCBP2-205ENST00000428425 ZNF644Q9H582 1327 aaPredicted RBP20.17■□□□□ 0.82
NCBP2-205ENST00000428425 KDM6BO15054 1643 aa20.16■□□□□ 0.82
NCBP2-205ENST00000428425 TROQ12816 1431 aaPredicted RBP20.15■□□□□ 0.82
NCBP2-205ENST00000428425 UACAQ9BZF9 1416 aa20.15■□□□□ 0.82
NCBP2-205ENST00000428425 KIF14Q15058 1648 aa20.15■□□□□ 0.82
NCBP2-205ENST00000428425 ABCA8O94911 1581 aa20.14■□□□□ 0.81
NCBP2-205ENST00000428425 MIER1Q8N108 512 aa20.14■□□□□ 0.81
NCBP2-205ENST00000428425 CDK11AQ9UQ88 783 aaPredicted RBP20.14■□□□□ 0.81
NCBP2-205ENST00000428425 GCC2Q8IWJ2 1684 aa20.13■□□□□ 0.81
NCBP2-205ENST00000428425 CLASP1Q7Z460 1538 aa20.1■□□□□ 0.81
NCBP2-205ENST00000428425 DAPK1P53355 1430 aa20.09■□□□□ 0.81
NCBP2-205ENST00000428425 RIMBP3CA6NJZ7 1639 aa20.09■□□□□ 0.81
NCBP2-205ENST00000428425 RIMBP3BA6NNM3 1639 aa20.09■□□□□ 0.81
NCBP2-205ENST00000428425 RIMBP3Q9UFD9 1639 aa20.09■□□□□ 0.81
NCBP2-205ENST00000428425 ABCC5O15440 1437 aa20.08■□□□□ 0.81
NCBP2-205ENST00000428425 ATP10BO94823 1461 aa20.08■□□□□ 0.81
NCBP2-205ENST00000428425 DNMT1P26358 1616 aaKnown RBP20.08■□□□□ 0.8
NCBP2-205ENST00000428425 ADCY10Q96PN6 1610 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms