RNA–Protein interactions for RNA: ENST00000428214.5

PEX1-203, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 1 (best) BASIC

Gene PEX1, Length 3,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-203ENST00000428214 SNAPC4Q5SXM2 1469 aa17.39■□□□□ 0.38
PEX1-203ENST00000428214 FHOD3Q2V2M9 1422 aa17.39■□□□□ 0.37
PEX1-203ENST00000428214 KANK4Q5T7N3 995 aaPredicted RBP17.39■□□□□ 0.37
PEX1-203ENST00000428214 ADAMTS12P58397 1594 aa17.39■□□□□ 0.37
PEX1-203ENST00000428214 CTTNBP2Q8WZ74 1663 aa17.39■□□□□ 0.37
PEX1-203ENST00000428214 GRIN2BQ13224 1484 aa17.38■□□□□ 0.37
PEX1-203ENST00000428214 FBLN2P98095 1184 aa17.35■□□□□ 0.37
PEX1-203ENST00000428214 FHAD1B1AJZ9 1412 aa17.33■□□□□ 0.37
PEX1-203ENST00000428214 ATP1B4Q9UN42 357 aaPredicted RBP17.31■□□□□ 0.36
PEX1-203ENST00000428214 PCF11O94913 1555 aaKnown RBP17.27■□□□□ 0.35
PEX1-203ENST00000428214 APLP2Q06481 763 aa17.26■□□□□ 0.35
PEX1-203ENST00000428214 GRIN2AQ12879 1464 aa17.24■□□□□ 0.35
PEX1-203ENST00000428214 HRCP23327 699 aa17.24■□□□□ 0.35
PEX1-203ENST00000428214 CHMP7Q8WUX9 453 aaPredicted RBP17.23■□□□□ 0.35
PEX1-203ENST00000428214 ARID3CA6NKF2 412 aa17.23■□□□□ 0.35
PEX1-203ENST00000428214 SAMD9Q5K651 1589 aa17.21■□□□□ 0.35
PEX1-203ENST00000428214 CEP170Q5SW79 1584 aa17.21■□□□□ 0.35
PEX1-203ENST00000428214 IQGAP2Q13576 1575 aa17.21■□□□□ 0.34
PEX1-203ENST00000428214 LRRIQ1Q96JM4 1722 aa17.18■□□□□ 0.34
PEX1-203ENST00000428214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.18■□□□□ 0.34
PEX1-203ENST00000428214 HNRNPUL2Q1KMD3 747 aaKnown RBP17.18■□□□□ 0.34
PEX1-203ENST00000428214 SYNJ2O15056 1496 aa17.17■□□□□ 0.34
PEX1-203ENST00000428214 MAGI1Q96QZ7 1491 aaPredicted RBP17.17■□□□□ 0.34
PEX1-203ENST00000428214 EFCAB5A4FU69 1503 aa17.17■□□□□ 0.34
PEX1-203ENST00000428214 TIAM1Q13009 1591 aa17.15■□□□□ 0.34
PEX1-203ENST00000428214 DISP1Q96F81 1524 aa17.12■□□□□ 0.33
PEX1-203ENST00000428214 KIAA0586Q9BVV6 1533 aa17.1■□□□□ 0.33
PEX1-203ENST00000428214 CHD1O14646 1710 aa17.09■□□□□ 0.33
PEX1-203ENST00000428214 CASKIN1Q8WXD9 1431 aa17.09■□□□□ 0.33
PEX1-203ENST00000428214 LRRC9Q6ZRR7 1453 aa17.08■□□□□ 0.32
PEX1-203ENST00000428214 FYCO1Q9BQS8 1478 aa17.07■□□□□ 0.32
PEX1-203ENST00000428214 UGGT2Q9NYU1 1516 aa17.06■□□□□ 0.32
PEX1-203ENST00000428214 PHLDB1Q86UU1 1377 aa17.06■□□□□ 0.32
PEX1-203ENST00000428214 CFAP43Q8NDM7 1665 aa17.06■□□□□ 0.32
PEX1-203ENST00000428214 ITGAEP38570 1179 aa17.06■□□□□ 0.32
PEX1-203ENST00000428214 FMN1Q68DA7 1419 aa17.06■□□□□ 0.32
PEX1-203ENST00000428214 NUP160Q12769 1436 aa17.05■□□□□ 0.32
PEX1-203ENST00000428214 KIAA0556O60303 1618 aa17.05■□□□□ 0.32
PEX1-203ENST00000428214 CDK13Q14004 1512 aaKnown RBP17.04■□□□□ 0.32
PEX1-203ENST00000428214 JPH4Q96JJ6 628 aa17.03■□□□□ 0.32
PEX1-203ENST00000428214 MAGI3Q5TCQ9 1506 aa17.03■□□□□ 0.32
PEX1-203ENST00000428214 PLB1Q6P1J6 1458 aa16.99■□□□□ 0.31
PEX1-203ENST00000428214 ERCC6L2Q5T890 1561 aa16.97■□□□□ 0.31
PEX1-203ENST00000428214 MAP3K1Q13233 1512 aa16.97■□□□□ 0.31
PEX1-203ENST00000428214 CCER1Q8TC90 406 aaPredicted RBP16.95■□□□□ 0.3
PEX1-203ENST00000428214 RRBP1Q9P2E9 1410 aaKnown RBP16.95■□□□□ 0.3
PEX1-203ENST00000428214 CCNB3Q8WWL7 1395 aa16.94■□□□□ 0.3
PEX1-203ENST00000428214 EPRSP07814 1512 aaKnown RBP16.94■□□□□ 0.3
PEX1-203ENST00000428214 MTUS2Q5JR59 1369 aa16.93■□□□□ 0.3
PEX1-203ENST00000428214 NUP153P49790 1475 aaKnown RBP16.93■□□□□ 0.3
PEX1-203ENST00000428214 FAM50AQ14320 339 aaKnown RBP16.92■□□□□ 0.3
PEX1-203ENST00000428214 PRG4Q92954 1404 aaPredicted RBP16.92■□□□□ 0.3
PEX1-203ENST00000428214 HECW1Q76N89 1606 aa16.9■□□□□ 0.3
PEX1-203ENST00000428214 RAPGEF6Q8TEU7 1601 aa16.88■□□□□ 0.29
PEX1-203ENST00000428214 NCOA2Q15596 1464 aa16.87■□□□□ 0.29
PEX1-203ENST00000428214 CARMIL2Q6F5E8 1435 aa16.84■□□□□ 0.29
PEX1-203ENST00000428214 CCDC18Q5T9S5 1454 aa16.81■□□□□ 0.28
PEX1-203ENST00000428214 EHBP1L1Q8N3D4 1523 aa16.8■□□□□ 0.28
PEX1-203ENST00000428214 FGD6Q6ZV73 1430 aa16.8■□□□□ 0.28
PEX1-203ENST00000428214 SUPT6HQ7KZ85 1726 aaKnown RBP16.8■□□□□ 0.28
PEX1-203ENST00000428214 PTPRKQ15262 1439 aa16.79■□□□□ 0.28
PEX1-203ENST00000428214 SHROOM2Q13796 1616 aa16.79■□□□□ 0.28
PEX1-203ENST00000428214 CLASP1Q7Z460 1538 aa16.78■□□□□ 0.28
PEX1-203ENST00000428214 PTPRGP23470 1445 aa16.78■□□□□ 0.28
PEX1-203ENST00000428214 ZNF644Q9H582 1327 aaPredicted RBP16.77■□□□□ 0.28
PEX1-203ENST00000428214 ABCA8O94911 1581 aa16.77■□□□□ 0.28
PEX1-203ENST00000428214 ARHGEF11O15085 1522 aa16.77■□□□□ 0.27
PEX1-203ENST00000428214 KIF14Q15058 1648 aa16.77■□□□□ 0.27
PEX1-203ENST00000428214 MYOM3Q5VTT5 1437 aa16.76■□□□□ 0.27
PEX1-203ENST00000428214 ATP10BO94823 1461 aa16.75■□□□□ 0.27
PEX1-203ENST00000428214 RAB3GAP2Q9H2M9 1393 aa16.72■□□□□ 0.27
PEX1-203ENST00000428214 CHIC2Q9UKJ5 165 aa16.72■□□□□ 0.27
PEX1-203ENST00000428214 PTPN23Q9H3S7 1636 aa16.71■□□□□ 0.27
PEX1-203ENST00000428214 DHX57Q6P158 1386 aaKnown RBP16.7■□□□□ 0.26
PEX1-203ENST00000428214 ZEB1P37275 1124 aaPredicted RBP16.66■□□□□ 0.26
PEX1-203ENST00000428214 TROQ12816 1431 aaPredicted RBP16.66■□□□□ 0.26
PEX1-203ENST00000428214 ZNF777Q9ULD5 760 aaPredicted RBP16.65■□□□□ 0.26
PEX1-203ENST00000428214 UACAQ9BZF9 1416 aa16.65■□□□□ 0.26
PEX1-203ENST00000428214 RRP7BPQ9NSQ0 103 aa16.65■□□□□ 0.26
PEX1-203ENST00000428214 SETD5Q9C0A6 1442 aa16.62■□□□□ 0.25
PEX1-203ENST00000428214 CDK11AQ9UQ88 783 aaPredicted RBP16.61■□□□□ 0.25
PEX1-203ENST00000428214 PLEKHD1A6NEE1 506 aa16.61■□□□□ 0.25
PEX1-203ENST00000428214 KDM6BO15054 1643 aa16.61■□□□□ 0.25
PEX1-203ENST00000428214 GPATCH8Q9UKJ3 1502 aaKnown RBP16.6■□□□□ 0.25
PEX1-203ENST00000428214 KCNH8Q96L42 1107 aa16.6■□□□□ 0.25
PEX1-203ENST00000428214 OSCARQ8IYS5 282 aa16.6■□□□□ 0.25
PEX1-203ENST00000428214 TCOF1Q13428 1488 aaKnown RBP16.58■□□□□ 0.25
PEX1-203ENST00000428214 ABCC2Q92887 1545 aa16.58■□□□□ 0.25
PEX1-203ENST00000428214 CDC42BPAQ5VT25 1732 aa16.58■□□□□ 0.24
PEX1-203ENST00000428214 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.57■□□□□ 0.24
PEX1-203ENST00000428214 CFDP1Q9UEE9 299 aaPredicted RBP16.57■□□□□ 0.24
PEX1-203ENST00000428214 ADCY10Q96PN6 1610 aa16.56■□□□□ 0.24
PEX1-203ENST00000428214 ABCC10Q5T3U5 1492 aa16.56■□□□□ 0.24
PEX1-203ENST00000428214 MAPKBP1O60336 1514 aa16.56■□□□□ 0.24
PEX1-203ENST00000428214 NAIPQ13075 1403 aa16.56■□□□□ 0.24
PEX1-203ENST00000428214 ZCCHC11Q5TAX3 1644 aaKnown RBP16.55■□□□□ 0.24
PEX1-203ENST00000428214 CAMSAP2Q08AD1 1489 aa16.55■□□□□ 0.24
PEX1-203ENST00000428214 TTC37Q6PGP7 1564 aa16.54■□□□□ 0.24
PEX1-203ENST00000428214 MIA2Q96PC5 1412 aa16.54■□□□□ 0.24
PEX1-203ENST00000428214 ABCC5O15440 1437 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms