RNA–Protein interactions for RNA: ENST00000428154.5

PMPCB-202, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 1 (best) BASIC

Gene PMPCB, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-202ENST00000428154 AQRO60306 1485 aaKnown RBP eCLIP29.9■■■□□ 2.383e-6■■■□□ 17
PMPCB-202ENST00000428154 CFAP43Q8NDM7 1665 aa29.9■■■□□ 2.38
PMPCB-202ENST00000428154 LRRC9Q6ZRR7 1453 aa29.86■■■□□ 2.37
PMPCB-202ENST00000428154 ZNF316A6NFI3 1004 aaPredicted RBP29.85■■■□□ 2.37
PMPCB-202ENST00000428154 DIEXFQ68CQ4 756 aaKnown RBP29.85■■■□□ 2.37
PMPCB-202ENST00000428154 FYCO1Q9BQS8 1478 aa29.84■■■□□ 2.37
PMPCB-202ENST00000428154 KIF21AQ7Z4S6 1674 aa29.82■■■□□ 2.36
PMPCB-202ENST00000428154 GAPVD1Q14C86 1478 aa29.81■■■□□ 2.36
PMPCB-202ENST00000428154 PCF11O94913 1555 aaKnown RBP29.79■■■□□ 2.36
PMPCB-202ENST00000428154 CASKIN1Q8WXD9 1431 aa29.79■■■□□ 2.36
PMPCB-202ENST00000428154 DHX57Q6P158 1386 aaKnown RBP29.77■■■□□ 2.36
PMPCB-202ENST00000428154 FMN1Q68DA7 1419 aa29.77■■■□□ 2.36
PMPCB-202ENST00000428154 TARBP1Q13395 1621 aaKnown RBP29.73■■■□□ 2.35
PMPCB-202ENST00000428154 SAMD9Q5K651 1589 aa29.7■■■□□ 2.34
PMPCB-202ENST00000428154 FHOD3Q2V2M9 1422 aa29.68■■■□□ 2.34
PMPCB-202ENST00000428154 TDRD9Q8NDG6 1382 aaKnown RBP29.67■■■□□ 2.34
PMPCB-202ENST00000428154 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.66■■■□□ 2.34
PMPCB-202ENST00000428154 THOC2Q8NI27 1593 aaKnown RBP29.62■■■□□ 2.33
PMPCB-202ENST00000428154 MRC2Q9UBG0 1479 aa29.61■■■□□ 2.33
PMPCB-202ENST00000428154 PHLDB1Q86UU1 1377 aa29.58■■■□□ 2.33
PMPCB-202ENST00000428154 SNAPC4Q5SXM2 1469 aa29.58■■■□□ 2.33
PMPCB-202ENST00000428154 PBRM1Q86U86 1689 aa29.57■■■□□ 2.32
PMPCB-202ENST00000428154 P3H3Q8IVL6 736 aa29.55■■■□□ 2.32
PMPCB-202ENST00000428154 DNAJC5BQ9UF47 199 aa29.53■■■□□ 2.32
PMPCB-202ENST00000428154 SETD5Q9C0A6 1442 aa29.52■■■□□ 2.32
PMPCB-202ENST00000428154 RAB3GAP2Q9H2M9 1393 aa29.48■■■□□ 2.31
PMPCB-202ENST00000428154 GRIN2BQ13224 1484 aa29.46■■■□□ 2.31
PMPCB-202ENST00000428154 ADAMTS12P58397 1594 aa29.46■■■□□ 2.31
PMPCB-202ENST00000428154 IFT140Q96RY7 1462 aa29.45■■■□□ 2.3
PMPCB-202ENST00000428154 CENPBP07199 599 aaPredicted RBP29.45■■■□□ 2.3
PMPCB-202ENST00000428154 ATP1B4Q9UN42 357 aaPredicted RBP29.43■■■□□ 2.3
PMPCB-202ENST00000428154 WDR62O43379 1518 aa29.42■■■□□ 2.3
PMPCB-202ENST00000428154 CCDC18Q5T9S5 1454 aa29.4■■■□□ 2.3
PMPCB-202ENST00000428154 IQGAP2Q13576 1575 aa29.38■■■□□ 2.29
PMPCB-202ENST00000428154 MTUS2Q5JR59 1369 aa29.38■■■□□ 2.29
PMPCB-202ENST00000428154 ITGAEP38570 1179 aa29.38■■■□□ 2.29
PMPCB-202ENST00000428154 EHBP1L1Q8N3D4 1523 aa29.37■■■□□ 2.29
PMPCB-202ENST00000428154 FAM50AQ14320 339 aaKnown RBP29.37■■■□□ 2.29
PMPCB-202ENST00000428154 FGD6Q6ZV73 1430 aa29.36■■■□□ 2.29
PMPCB-202ENST00000428154 ACIN1Q9UKV3 1341 aaKnown RBP29.36■■■□□ 2.29
PMPCB-202ENST00000428154 SUPT6HQ7KZ85 1726 aaKnown RBP29.34■■■□□ 2.29
PMPCB-202ENST00000428154 LRRIQ1Q96JM4 1722 aa29.33■■■□□ 2.29
PMPCB-202ENST00000428154 MAPKBP1O60336 1514 aa29.32■■■□□ 2.28
PMPCB-202ENST00000428154 HECW1Q76N89 1606 aa29.31■■■□□ 2.28
PMPCB-202ENST00000428154 UGGT2Q9NYU1 1516 aa29.29■■■□□ 2.28
PMPCB-202ENST00000428154 TIMELESSQ9UNS1 1208 aa29.28■■■□□ 2.28
PMPCB-202ENST00000428154 MYOM3Q5VTT5 1437 aa29.26■■■□□ 2.27
PMPCB-202ENST00000428154 NCOA2Q15596 1464 aa29.26■■■□□ 2.27
PMPCB-202ENST00000428154 SCAF1Q9H7N4 1312 aaKnown RBP29.24■■■□□ 2.27
PMPCB-202ENST00000428154 ARHGEF11O15085 1522 aa29.24■■■□□ 2.27
PMPCB-202ENST00000428154 KIAA0586Q9BVV6 1533 aa29.19■■■□□ 2.26
PMPCB-202ENST00000428154 HFM1A2PYH4 1435 aa29.16■■■□□ 2.26
PMPCB-202ENST00000428154 NEUROD1Q13562 356 aa29.15■■■□□ 2.26
PMPCB-202ENST00000428154 EPRSP07814 1512 aaKnown RBP29.13■■■□□ 2.25
PMPCB-202ENST00000428154 MIER1Q8N108 512 aa29.13■■■□□ 2.25
PMPCB-202ENST00000428154 ZNF608Q9ULD9 1512 aaPredicted RBP29.12■■■□□ 2.25
PMPCB-202ENST00000428154 TCOF1Q13428 1488 aaKnown RBP29.12■■■□□ 2.25
PMPCB-202ENST00000428154 PTPN23Q9H3S7 1636 aa29.11■■■□□ 2.25
PMPCB-202ENST00000428154 EIF4G3O43432 1585 aaKnown RBP29.1■■■□□ 2.25
PMPCB-202ENST00000428154 MAGI1Q96QZ7 1491 aaPredicted RBP29.09■■■□□ 2.25
PMPCB-202ENST00000428154 GRIN2AQ12879 1464 aa29.08■■■□□ 2.25
PMPCB-202ENST00000428154 MIA2Q96PC5 1412 aa29.07■■■□□ 2.24
PMPCB-202ENST00000428154 ERCC6Q03468 1493 aa29.06■■■□□ 2.24
PMPCB-202ENST00000428154 KIAA0556O60303 1618 aa29.06■■■□□ 2.24
PMPCB-202ENST00000428154 MAGI3Q5TCQ9 1506 aa29.06■■■□□ 2.24
PMPCB-202ENST00000428154 UACAQ9BZF9 1416 aa29.05■■■□□ 2.24
PMPCB-202ENST00000428154 AKNAQ7Z591 1439 aa29.04■■■□□ 2.24
PMPCB-202ENST00000428154 DISP1Q96F81 1524 aa28.99■■■□□ 2.23
PMPCB-202ENST00000428154 NAIPQ13075 1403 aa28.99■■■□□ 2.23
PMPCB-202ENST00000428154 PTPRKQ15262 1439 aa28.99■■■□□ 2.23
PMPCB-202ENST00000428154 SYNJ2O15056 1496 aa28.96■■■□□ 2.23
PMPCB-202ENST00000428154 GCC2Q8IWJ2 1684 aa28.95■■■□□ 2.23
PMPCB-202ENST00000428154 RAPGEF6Q8TEU7 1601 aa28.93■■■□□ 2.22
PMPCB-202ENST00000428154 CDK13Q14004 1512 aaKnown RBP28.91■■■□□ 2.22
PMPCB-202ENST00000428154 CDK11AQ9UQ88 783 aaPredicted RBP28.89■■■□□ 2.21
PMPCB-202ENST00000428154 SIN3AQ96ST3 1273 aa28.88■■■□□ 2.21
PMPCB-202ENST00000428154 PPP1R15AO75807 674 aaPredicted RBP28.85■■■□□ 2.21
PMPCB-202ENST00000428154 NUP153P49790 1475 aaKnown RBP28.84■■■□□ 2.21
PMPCB-202ENST00000428154 GTF3C3Q9Y5Q9 886 aa28.83■■■□□ 2.21
PMPCB-202ENST00000428154 NUP160Q12769 1436 aa28.82■■■□□ 2.2
PMPCB-202ENST00000428154 CEP170Q5SW79 1584 aa28.82■■■□□ 2.2
PMPCB-202ENST00000428154 CHMP7Q8WUX9 453 aaPredicted RBP28.81■■■□□ 2.2
PMPCB-202ENST00000428154 CARMIL2Q6F5E8 1435 aa28.81■■■□□ 2.2
PMPCB-202ENST00000428154 TONSLQ96HA7 1378 aa28.8■■■□□ 2.2
PMPCB-202ENST00000428154 ROCK1Q13464 1354 aa28.79■■■□□ 2.2
PMPCB-202ENST00000428154 YTHDC1Q96MU7 727 aaKnown RBP28.77■■■□□ 2.2
PMPCB-202ENST00000428154 DNMT1P26358 1616 aaKnown RBP28.74■■■□□ 2.19
PMPCB-202ENST00000428154 TROQ12816 1431 aaPredicted RBP28.73■■■□□ 2.19
PMPCB-202ENST00000428154 PELP1Q8IZL8 1130 aaKnown RBP28.72■■■□□ 2.19
PMPCB-202ENST00000428154 ITSN2Q9NZM3 1697 aa28.72■■■□□ 2.19
PMPCB-202ENST00000428154 ADCY10Q96PN6 1610 aa28.71■■■□□ 2.19
PMPCB-202ENST00000428154 DAPK1P53355 1430 aa28.69■■■□□ 2.18
PMPCB-202ENST00000428154 JPH4Q96JJ6 628 aa28.64■■■□□ 2.18
PMPCB-202ENST00000428154 RRP7BPQ9NSQ0 103 aa28.64■■■□□ 2.18
PMPCB-202ENST00000428154 ABCC5O15440 1437 aa28.61■■■□□ 2.17
PMPCB-202ENST00000428154 CHIC2Q9UKJ5 165 aa28.59■■■□□ 2.17
PMPCB-202ENST00000428154 ABCA8O94911 1581 aa28.58■■■□□ 2.17
PMPCB-202ENST00000428154 PLB1Q6P1J6 1458 aa28.57■■■□□ 2.16
PMPCB-202ENST00000428154 KDM6BO15054 1643 aa28.55■■■□□ 2.16
PMPCB-202ENST00000428154 KDM5BQ9UGL1 1544 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms