RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 JPH4Q96JJ6 628 aa28.28■■■□□ 2.12
VRK2-204ENST00000428021 KIAA0586Q9BVV6 1533 aa28.26■■■□□ 2.11
VRK2-204ENST00000428021 PRG4Q92954 1404 aaPredicted RBP28.22■■■□□ 2.11
VRK2-204ENST00000428021 RAPGEF2Q9Y4G8 1499 aa28.21■■■□□ 2.11
VRK2-204ENST00000428021 CHIC1Q5VXU3 224 aa28.16■■■□□ 2.1
VRK2-204ENST00000428021 PRXQ9BXM0 1461 aa28.12■■■□□ 2.09
VRK2-204ENST00000428021 IQGAP2Q13576 1575 aa28.07■■■□□ 2.08
VRK2-204ENST00000428021 CSRNP3Q8WYN3 585 aa28.06■■■□□ 2.08
VRK2-204ENST00000428021 EEA1Q15075 1411 aa28.03■■■□□ 2.08
VRK2-204ENST00000428021 CTTNBP2Q8WZ74 1663 aa27.94■■■□□ 2.06
VRK2-204ENST00000428021 UGGT2Q9NYU1 1516 aa27.93■■■□□ 2.06
VRK2-204ENST00000428021 FAM9AQ8IZU1 332 aaPredicted RBP27.93■■■□□ 2.06
VRK2-204ENST00000428021 DISP1Q96F81 1524 aa27.92■■■□□ 2.06
VRK2-204ENST00000428021 CARMIL2Q6F5E8 1435 aa27.92■■■□□ 2.06
VRK2-204ENST00000428021 TNIKQ9UKE5 1360 aa27.87■■■□□ 2.05
VRK2-204ENST00000428021 PTPRGP23470 1445 aa27.86■■■□□ 2.05
VRK2-204ENST00000428021 TRHP20396 242 aaPredicted RBP27.84■■■□□ 2.05
VRK2-204ENST00000428021 ADCY10Q96PN6 1610 aa27.81■■■□□ 2.04
VRK2-204ENST00000428021 KIAA0556O60303 1618 aa27.81■■■□□ 2.04
VRK2-204ENST00000428021 TTBK1Q5TCY1 1321 aaPredicted RBP27.79■■■□□ 2.04
VRK2-204ENST00000428021 KIF21BO75037 1637 aa27.78■■■□□ 2.04
VRK2-204ENST00000428021 GOLGA3Q08378 1498 aa27.73■■■□□ 2.03
VRK2-204ENST00000428021 NPM1P06748 294 aaKnown RBP eCLIP27.68■■■□□ 2.02
VRK2-204ENST00000428021 UACAQ9BZF9 1416 aa27.67■■■□□ 2.02
VRK2-204ENST00000428021 UHRF1BP1LA0JNW5 1464 aa27.66■■■□□ 2.02
VRK2-204ENST00000428021 MAPKBP1O60336 1514 aa27.64■■■□□ 2.02
VRK2-204ENST00000428021 ABCC2Q92887 1545 aa27.62■■■□□ 2.01
VRK2-204ENST00000428021 SAMD9Q5K651 1589 aa27.6■■■□□ 2.01
VRK2-204ENST00000428021 P3H3Q8IVL6 736 aa27.58■■■□□ 2.01
VRK2-204ENST00000428021 EHMT2Q96KQ7 1210 aa27.57■■■□□ 2
VRK2-204ENST00000428021 KIF13AQ9H1H9 1805 aa27.57■■■□□ 2
VRK2-204ENST00000428021 PLB1Q6P1J6 1458 aa27.57■■■□□ 2
VRK2-204ENST00000428021 ABCA8O94911 1581 aa27.54■■■□□ 2
VRK2-204ENST00000428021 ABCC10Q5T3U5 1492 aa27.54■■■□□ 2
VRK2-204ENST00000428021 KDM5BQ9UGL1 1544 aa27.54■■■□□ 2
VRK2-204ENST00000428021 UBTFP17480 764 aaKnown RBP27.52■■■□□ 2
VRK2-204ENST00000428021 RANGAP1P46060 587 aaPredicted RBP27.52■■■□□ 2
VRK2-204ENST00000428021 DIP2BQ9P265 1576 aa27.48■■□□□ 1.99
VRK2-204ENST00000428021 FAM69CQ0P6D2 419 aa27.48■■□□□ 1.99
VRK2-204ENST00000428021 ZCCHC11Q5TAX3 1644 aaKnown RBP27.47■■□□□ 1.99
VRK2-204ENST00000428021 ASXL2Q76L83 1435 aa27.47■■□□□ 1.99
VRK2-204ENST00000428021 FHOD3Q2V2M9 1422 aa27.43■■□□□ 1.98
VRK2-204ENST00000428021 EFCAB5A4FU69 1503 aa27.42■■□□□ 1.98
VRK2-204ENST00000428021 RAPGEF6Q8TEU7 1601 aa27.34■■□□□ 1.97
VRK2-204ENST00000428021 ARHGAP35Q9NRY4 1499 aa27.32■■□□□ 1.96
VRK2-204ENST00000428021 GLI2P10070 1586 aa27.32■■□□□ 1.96
VRK2-204ENST00000428021 ATP10BO94823 1461 aa27.32■■□□□ 1.96
VRK2-204ENST00000428021 EPRSP07814 1512 aaKnown RBP27.31■■□□□ 1.96
VRK2-204ENST00000428021 WDR7Q9Y4E6 1490 aa27.3■■□□□ 1.96
VRK2-204ENST00000428021 ARID3CA6NKF2 412 aa27.29■■□□□ 1.96
VRK2-204ENST00000428021 NUP153P49790 1475 aaKnown RBP27.27■■□□□ 1.96
VRK2-204ENST00000428021 TSPOAP1O95153 1857 aa27.26■■□□□ 1.95
VRK2-204ENST00000428021 PPRC1Q5VV67 1664 aaKnown RBP27.2■■□□□ 1.94
VRK2-204ENST00000428021 MAP3K4Q9Y6R4 1608 aa27.19■■□□□ 1.94
VRK2-204ENST00000428021 KCNH8Q96L42 1107 aa27.18■■□□□ 1.94
VRK2-204ENST00000428021 FMN1Q68DA7 1419 aa27.17■■□□□ 1.94
VRK2-204ENST00000428021 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.12■■□□□ 1.93
VRK2-204ENST00000428021 HNRNPUL2Q1KMD3 747 aaKnown RBP27.12■■□□□ 1.93
VRK2-204ENST00000428021 CLIP1P30622 1438 aa27.09■■□□□ 1.93
VRK2-204ENST00000428021 CFAP43Q8NDM7 1665 aa27.08■■□□□ 1.92
VRK2-204ENST00000428021 CD109Q6YHK3 1445 aa27.07■■□□□ 1.92
VRK2-204ENST00000428021 CDK13Q14004 1512 aaKnown RBP27.06■■□□□ 1.92
VRK2-204ENST00000428021 KDM6BO15054 1643 aa27.05■■□□□ 1.92
VRK2-204ENST00000428021 HECW1Q76N89 1606 aa27.05■■□□□ 1.92
VRK2-204ENST00000428021 PLEKHD1A6NEE1 506 aa27.03■■□□□ 1.92
VRK2-204ENST00000428021 MAGI3Q5TCQ9 1506 aa27.03■■□□□ 1.92
VRK2-204ENST00000428021 TEX14Q8IWB6 1497 aa27.03■■□□□ 1.92
VRK2-204ENST00000428021 LOC105371045A0A1W2PR82 267 aa27.02■■□□□ 1.92
VRK2-204ENST00000428021 ATP1B4Q9UN42 357 aaPredicted RBP27.02■■□□□ 1.92
VRK2-204ENST00000428021 ABCA9Q8IUA7 1624 aa27.01■■□□□ 1.92
VRK2-204ENST00000428021 LRRIQ1Q96JM4 1722 aa26.98■■□□□ 1.91
VRK2-204ENST00000428021 COL17A1Q9UMD9 1497 aaPredicted RBP26.98■■□□□ 1.91
VRK2-204ENST00000428021 CASKIN1Q8WXD9 1431 aa26.98■■□□□ 1.91
VRK2-204ENST00000428021 PCF11O94913 1555 aaKnown RBP26.97■■□□□ 1.91
VRK2-204ENST00000428021 CEP162Q5TB80 1403 aa26.95■■□□□ 1.9
VRK2-204ENST00000428021 FYCO1Q9BQS8 1478 aa26.89■■□□□ 1.9
VRK2-204ENST00000428021 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.89■■□□□ 1.89
VRK2-204ENST00000428021 CDK11AQ9UQ88 783 aaPredicted RBP26.86■■□□□ 1.89
VRK2-204ENST00000428021 CCDC18Q5T9S5 1454 aa26.85■■□□□ 1.89
VRK2-204ENST00000428021 TTC37Q6PGP7 1564 aa26.84■■□□□ 1.89
VRK2-204ENST00000428021 TROQ12816 1431 aaPredicted RBP26.83■■□□□ 1.89
VRK2-204ENST00000428021 ARAP3Q8WWN8 1544 aa26.8■■□□□ 1.88
VRK2-204ENST00000428021 NEO1Q92859 1461 aa26.8■■□□□ 1.88
VRK2-204ENST00000428021 KIF14Q15058 1648 aa26.79■■□□□ 1.88
VRK2-204ENST00000428021 PHLDB1Q86UU1 1377 aa26.79■■□□□ 1.88
VRK2-204ENST00000428021 PLCH2O75038 1416 aa26.73■■□□□ 1.87
VRK2-204ENST00000428021 FANCAO15360 1455 aa26.72■■□□□ 1.87
VRK2-204ENST00000428021 AKNAQ7Z591 1439 aa26.69■■□□□ 1.86
VRK2-204ENST00000428021 MYO5CQ9NQX4 1742 aa26.68■■□□□ 1.86
VRK2-204ENST00000428021 CFAP74Q9C0B2 1584 aa26.67■■□□□ 1.86
VRK2-204ENST00000428021 RAPGEF3O95398 923 aa26.67■■□□□ 1.86
VRK2-204ENST00000428021 FRMPD1Q5SYB0 1578 aa26.64■■□□□ 1.86
VRK2-204ENST00000428021 VPS8Q8N3P4 1428 aa26.64■■□□□ 1.85
VRK2-204ENST00000428021 EFCAB2Q5VUJ9 269 aa26.61■■□□□ 1.85
VRK2-204ENST00000428021 DENND4BO75064 1496 aaPredicted RBP26.61■■□□□ 1.85
VRK2-204ENST00000428021 RICTORQ6R327 1708 aa26.59■■□□□ 1.85
VRK2-204ENST00000428021 CDC42BPBQ9Y5S2 1711 aa26.59■■□□□ 1.85
VRK2-204ENST00000428021 ADGRL1O94910 1474 aa26.57■■□□□ 1.84
VRK2-204ENST00000428021 ARHGAP5Q13017 1502 aa26.57■■□□□ 1.84
VRK2-204ENST00000428021 MTUS2Q5JR59 1369 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms