RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 CLIP1P30622 1438 aa19.38■□□□□ 0.69
RFC4-206ENST00000427785 IQGAP2Q13576 1575 aa19.36■□□□□ 0.69
RFC4-206ENST00000427785 RANGAP1P46060 587 aaPredicted RBP19.34■□□□□ 0.69
RFC4-206ENST00000427785 CHMP7Q8WUX9 453 aaPredicted RBP19.3■□□□□ 0.68
RFC4-206ENST00000427785 NUP160Q12769 1436 aa19.29■□□□□ 0.68
RFC4-206ENST00000427785 FBLN2P98095 1184 aa19.29■□□□□ 0.68
RFC4-206ENST00000427785 ARAP1Q96P48 1450 aa19.28■□□□□ 0.68
RFC4-206ENST00000427785 ARHGAP35Q9NRY4 1499 aa19.28■□□□□ 0.68
RFC4-206ENST00000427785 SAMD9Q5K651 1589 aa19.28■□□□□ 0.68
RFC4-206ENST00000427785 EFCAB5A4FU69 1503 aa19.28■□□□□ 0.68
RFC4-206ENST00000427785 KIAA0586Q9BVV6 1533 aa19.25■□□□□ 0.67
RFC4-206ENST00000427785 UGGT2Q9NYU1 1516 aa19.21■□□□□ 0.67
RFC4-206ENST00000427785 KIAA0556O60303 1618 aa19.19■□□□□ 0.66
RFC4-206ENST00000427785 FHOD3Q2V2M9 1422 aa19.17■□□□□ 0.66
RFC4-206ENST00000427785 VPS8Q8N3P4 1428 aa19.17■□□□□ 0.66
RFC4-206ENST00000427785 CLASP1Q7Z460 1538 aa19.17■□□□□ 0.66
RFC4-206ENST00000427785 PCF11O94913 1555 aaKnown RBP19.15■□□□□ 0.66
RFC4-206ENST00000427785 SHROOM2Q13796 1616 aa19.15■□□□□ 0.66
RFC4-206ENST00000427785 DISP1Q96F81 1524 aa19.12■□□□□ 0.65
RFC4-206ENST00000427785 P3H3Q8IVL6 736 aa19.1■□□□□ 0.65
RFC4-206ENST00000427785 LRRIQ1Q96JM4 1722 aa19.06■□□□□ 0.64
RFC4-206ENST00000427785 CFAP43Q8NDM7 1665 aa19.05■□□□□ 0.64
RFC4-206ENST00000427785 ERCC6L2Q5T890 1561 aa19.02■□□□□ 0.64
RFC4-206ENST00000427785 FYCO1Q9BQS8 1478 aa19.01■□□□□ 0.63
RFC4-206ENST00000427785 FMN1Q68DA7 1419 aa19■□□□□ 0.63
RFC4-206ENST00000427785 PRG4Q92954 1404 aaPredicted RBP19■□□□□ 0.63
RFC4-206ENST00000427785 CARMIL2Q6F5E8 1435 aa19■□□□□ 0.63
RFC4-206ENST00000427785 JPH4Q96JJ6 628 aa18.99■□□□□ 0.63
RFC4-206ENST00000427785 HECW1Q76N89 1606 aa18.99■□□□□ 0.63
RFC4-206ENST00000427785 RAPGEF6Q8TEU7 1601 aa18.97■□□□□ 0.63
RFC4-206ENST00000427785 CASKIN1Q8WXD9 1431 aa18.96■□□□□ 0.63
RFC4-206ENST00000427785 TIAM1Q13009 1591 aa18.96■□□□□ 0.63
RFC4-206ENST00000427785 TTBK1Q5TCY1 1321 aaPredicted RBP18.92■□□□□ 0.62
RFC4-206ENST00000427785 PPARGC1BQ86YN6 1023 aaKnown RBP18.91■□□□□ 0.62
RFC4-206ENST00000427785 ABCA8O94911 1581 aa18.89■□□□□ 0.61
RFC4-206ENST00000427785 OSCARQ8IYS5 282 aa18.88■□□□□ 0.61
RFC4-206ENST00000427785 MAP3K1Q13233 1512 aa18.87■□□□□ 0.61
RFC4-206ENST00000427785 PLB1Q6P1J6 1458 aa18.87■□□□□ 0.61
RFC4-206ENST00000427785 CDK13Q14004 1512 aaKnown RBP18.86■□□□□ 0.61
RFC4-206ENST00000427785 APLP2Q06481 763 aa18.85■□□□□ 0.61
RFC4-206ENST00000427785 ATP1B4Q9UN42 357 aaPredicted RBP18.85■□□□□ 0.61
RFC4-206ENST00000427785 NUP153P49790 1475 aaKnown RBP18.84■□□□□ 0.61
RFC4-206ENST00000427785 CCDC18Q5T9S5 1454 aa18.84■□□□□ 0.61
RFC4-206ENST00000427785 EPRSP07814 1512 aaKnown RBP18.82■□□□□ 0.6
RFC4-206ENST00000427785 PTPRGP23470 1445 aa18.82■□□□□ 0.6
RFC4-206ENST00000427785 LRRC9Q6ZRR7 1453 aa18.79■□□□□ 0.6
RFC4-206ENST00000427785 MAGI3Q5TCQ9 1506 aa18.78■□□□□ 0.6
RFC4-206ENST00000427785 EHBP1L1Q8N3D4 1523 aa18.78■□□□□ 0.6
RFC4-206ENST00000427785 ABCC2Q92887 1545 aa18.77■□□□□ 0.6
RFC4-206ENST00000427785 ARID3CA6NKF2 412 aa18.76■□□□□ 0.59
RFC4-206ENST00000427785 KANK4Q5T7N3 995 aaPredicted RBP18.76■□□□□ 0.59
RFC4-206ENST00000427785 ARHGEF11O15085 1522 aa18.75■□□□□ 0.59
RFC4-206ENST00000427785 RIMBP3CA6NJZ7 1639 aa18.74■□□□□ 0.59
RFC4-206ENST00000427785 RIMBP3BA6NNM3 1639 aa18.74■□□□□ 0.59
RFC4-206ENST00000427785 ADCY10Q96PN6 1610 aa18.74■□□□□ 0.59
RFC4-206ENST00000427785 RIMBP3Q9UFD9 1639 aa18.74■□□□□ 0.59
RFC4-206ENST00000427785 SUPT6HQ7KZ85 1726 aaKnown RBP18.74■□□□□ 0.59
RFC4-206ENST00000427785 UACAQ9BZF9 1416 aa18.74■□□□□ 0.59
RFC4-206ENST00000427785 ZCCHC11Q5TAX3 1644 aaKnown RBP18.72■□□□□ 0.59
RFC4-206ENST00000427785 MTUS2Q5JR59 1369 aa18.68■□□□□ 0.58
RFC4-206ENST00000427785 UHRF1BP1LA0JNW5 1464 aa18.67■□□□□ 0.58
RFC4-206ENST00000427785 ATP10BO94823 1461 aa18.66■□□□□ 0.58
RFC4-206ENST00000427785 KIF14Q15058 1648 aa18.65■□□□□ 0.58
RFC4-206ENST00000427785 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.62■□□□□ 0.57
RFC4-206ENST00000427785 TRIM26Q12899 539 aaPredicted RBP18.62■□□□□ 0.57
RFC4-206ENST00000427785 HNRNPUL2Q1KMD3 747 aaKnown RBP18.62■□□□□ 0.57
RFC4-206ENST00000427785 NCOA2Q15596 1464 aa18.62■□□□□ 0.57
RFC4-206ENST00000427785 KDM5BQ9UGL1 1544 aa18.61■□□□□ 0.57
RFC4-206ENST00000427785 TROQ12816 1431 aaPredicted RBP18.6■□□□□ 0.57
RFC4-206ENST00000427785 PHLDB1Q86UU1 1377 aa18.59■□□□□ 0.57
RFC4-206ENST00000427785 ITSN2Q9NZM3 1697 aa18.58■□□□□ 0.57
RFC4-206ENST00000427785 PCGF6Q9BYE7 350 aa18.58■□□□□ 0.56
RFC4-206ENST00000427785 CDC42BPAQ5VT25 1732 aa18.56■□□□□ 0.56
RFC4-206ENST00000427785 RRBP1Q9P2E9 1410 aaKnown RBP18.54■□□□□ 0.56
RFC4-206ENST00000427785 TTC37Q6PGP7 1564 aa18.52■□□□□ 0.56
RFC4-206ENST00000427785 MYOM3Q5VTT5 1437 aa18.52■□□□□ 0.56
RFC4-206ENST00000427785 CDK11AQ9UQ88 783 aaPredicted RBP18.52■□□□□ 0.56
RFC4-206ENST00000427785 PTPN23Q9H3S7 1636 aa18.5■□□□□ 0.55
RFC4-206ENST00000427785 MYO5CQ9NQX4 1742 aa18.5■□□□□ 0.55
RFC4-206ENST00000427785 FGD6Q6ZV73 1430 aa18.49■□□□□ 0.55
RFC4-206ENST00000427785 PREX2Q70Z35 1606 aa18.49■□□□□ 0.55
RFC4-206ENST00000427785 ABCC10Q5T3U5 1492 aa18.48■□□□□ 0.55
RFC4-206ENST00000427785 CCNB3Q8WWL7 1395 aa18.48■□□□□ 0.55
RFC4-206ENST00000427785 PLEKHD1A6NEE1 506 aa18.47■□□□□ 0.55
RFC4-206ENST00000427785 WDR7Q9Y4E6 1490 aa18.46■□□□□ 0.55
RFC4-206ENST00000427785 CDC42BPBQ9Y5S2 1711 aa18.46■□□□□ 0.55
RFC4-206ENST00000427785 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.45■□□□□ 0.54
RFC4-206ENST00000427785 ASXL2Q76L83 1435 aa18.43■□□□□ 0.54
RFC4-206ENST00000427785 CYB5RLQ6IPT4 315 aa18.42■□□□□ 0.54
RFC4-206ENST00000427785 TCOF1Q13428 1488 aaKnown RBP18.41■□□□□ 0.54
RFC4-206ENST00000427785 GPATCH8Q9UKJ3 1502 aaKnown RBP18.41■□□□□ 0.54
RFC4-206ENST00000427785 ABCA9Q8IUA7 1624 aa18.4■□□□□ 0.54
RFC4-206ENST00000427785 MAPKBP1O60336 1514 aa18.39■□□□□ 0.53
RFC4-206ENST00000427785 MIA2Q96PC5 1412 aa18.38■□□□□ 0.53
RFC4-206ENST00000427785 CAMSAP2Q08AD1 1489 aa18.38■□□□□ 0.53
RFC4-206ENST00000427785 CROCC2H7BZ55 1655 aa18.38■□□□□ 0.53
RFC4-206ENST00000427785 FAM50AQ14320 339 aaKnown RBP18.37■□□□□ 0.53
RFC4-206ENST00000427785 DNMT1P26358 1616 aaKnown RBP18.35■□□□□ 0.53
RFC4-206ENST00000427785 SAMD9LQ8IVG5 1584 aa18.35■□□□□ 0.53
RFC4-206ENST00000427785 NPM1P06748 294 aaKnown RBP eCLIP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms