RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 JPH4Q96JJ6 628 aa25.24■■□□□ 1.63
RTN4-210ENST00000427710 PRG4Q92954 1404 aaPredicted RBP25.21■■□□□ 1.63
RTN4-210ENST00000427710 KIAA0586Q9BVV6 1533 aa25.17■■□□□ 1.62
RTN4-210ENST00000427710 RAPGEF2Q9Y4G8 1499 aa25.15■■□□□ 1.62
RTN4-210ENST00000427710 IQGAP2Q13576 1575 aa25.05■■□□□ 1.6
RTN4-210ENST00000427710 CHIC1Q5VXU3 224 aa25.04■■□□□ 1.6
RTN4-210ENST00000427710 TRHP20396 242 aaPredicted RBP25.02■■□□□ 1.6
RTN4-210ENST00000427710 PRXQ9BXM0 1461 aa25.01■■□□□ 1.59
RTN4-210ENST00000427710 CTTNBP2Q8WZ74 1663 aa25.01■■□□□ 1.59
RTN4-210ENST00000427710 FAM9AQ8IZU1 332 aaPredicted RBP25■■□□□ 1.59
RTN4-210ENST00000427710 TTBK1Q5TCY1 1321 aaPredicted RBP24.99■■□□□ 1.59
RTN4-210ENST00000427710 CSRNP3Q8WYN3 585 aa24.97■■□□□ 1.59
RTN4-210ENST00000427710 CARMIL2Q6F5E8 1435 aa24.9■■□□□ 1.58
RTN4-210ENST00000427710 DISP1Q96F81 1524 aa24.9■■□□□ 1.58
RTN4-210ENST00000427710 UGGT2Q9NYU1 1516 aa24.89■■□□□ 1.57
RTN4-210ENST00000427710 ADCY10Q96PN6 1610 aa24.89■■□□□ 1.57
RTN4-210ENST00000427710 EEA1Q15075 1411 aa24.88■■□□□ 1.57
RTN4-210ENST00000427710 PTPRGP23470 1445 aa24.86■■□□□ 1.57
RTN4-210ENST00000427710 TNIKQ9UKE5 1360 aa24.86■■□□□ 1.57
RTN4-210ENST00000427710 KIAA0556O60303 1618 aa24.84■■□□□ 1.57
RTN4-210ENST00000427710 EHMT2Q96KQ7 1210 aa24.77■■□□□ 1.56
RTN4-210ENST00000427710 NPM1P06748 294 aaKnown RBP eCLIP24.76■■□□□ 1.55
RTN4-210ENST00000427710 KIF13AQ9H1H9 1805 aa24.75■■□□□ 1.55
RTN4-210ENST00000427710 KIF21BO75037 1637 aa24.73■■□□□ 1.55
RTN4-210ENST00000427710 GOLGA3Q08378 1498 aa24.7■■□□□ 1.55
RTN4-210ENST00000427710 RANGAP1P46060 587 aaPredicted RBP24.7■■□□□ 1.54
RTN4-210ENST00000427710 P3H3Q8IVL6 736 aa24.7■■□□□ 1.54
RTN4-210ENST00000427710 UACAQ9BZF9 1416 aa24.69■■□□□ 1.54
RTN4-210ENST00000427710 MAPKBP1O60336 1514 aa24.66■■□□□ 1.54
RTN4-210ENST00000427710 ABCC2Q92887 1545 aa24.66■■□□□ 1.54
RTN4-210ENST00000427710 UHRF1BP1LA0JNW5 1464 aa24.64■■□□□ 1.54
RTN4-210ENST00000427710 PLB1Q6P1J6 1458 aa24.63■■□□□ 1.53
RTN4-210ENST00000427710 SAMD9Q5K651 1589 aa24.61■■□□□ 1.53
RTN4-210ENST00000427710 FAM69CQ0P6D2 419 aa24.6■■□□□ 1.53
RTN4-210ENST00000427710 DIP2BQ9P265 1576 aa24.59■■□□□ 1.53
RTN4-210ENST00000427710 ABCC10Q5T3U5 1492 aa24.59■■□□□ 1.53
RTN4-210ENST00000427710 ZCCHC11Q5TAX3 1644 aaKnown RBP24.59■■□□□ 1.53
RTN4-210ENST00000427710 TSPOAP1O95153 1857 aa24.58■■□□□ 1.52
RTN4-210ENST00000427710 UBTFP17480 764 aaKnown RBP24.57■■□□□ 1.52
RTN4-210ENST00000427710 ABCA8O94911 1581 aa24.57■■□□□ 1.52
RTN4-210ENST00000427710 KDM5BQ9UGL1 1544 aa24.55■■□□□ 1.52
RTN4-210ENST00000427710 ASXL2Q76L83 1435 aa24.54■■□□□ 1.52
RTN4-210ENST00000427710 FHOD3Q2V2M9 1422 aa24.51■■□□□ 1.51
RTN4-210ENST00000427710 ARID3CA6NKF2 412 aa24.5■■□□□ 1.51
RTN4-210ENST00000427710 RAPGEF6Q8TEU7 1601 aa24.43■■□□□ 1.5
RTN4-210ENST00000427710 EFCAB5A4FU69 1503 aa24.42■■□□□ 1.5
RTN4-210ENST00000427710 EPRSP07814 1512 aaKnown RBP24.4■■□□□ 1.5
RTN4-210ENST00000427710 GLI2P10070 1586 aa24.38■■□□□ 1.49
RTN4-210ENST00000427710 ATP10BO94823 1461 aa24.38■■□□□ 1.49
RTN4-210ENST00000427710 WDR7Q9Y4E6 1490 aa24.37■■□□□ 1.49
RTN4-210ENST00000427710 PPRC1Q5VV67 1664 aaKnown RBP24.37■■□□□ 1.49
RTN4-210ENST00000427710 ARHGAP35Q9NRY4 1499 aa24.34■■□□□ 1.49
RTN4-210ENST00000427710 KCNH8Q96L42 1107 aa24.34■■□□□ 1.49
RTN4-210ENST00000427710 NUP153P49790 1475 aaKnown RBP24.32■■□□□ 1.48
RTN4-210ENST00000427710 MAP3K4Q9Y6R4 1608 aa24.32■■□□□ 1.48
RTN4-210ENST00000427710 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.29■■□□□ 1.48
RTN4-210ENST00000427710 HNRNPUL2Q1KMD3 747 aaKnown RBP24.29■■□□□ 1.48
RTN4-210ENST00000427710 KDM6BO15054 1643 aa24.25■■□□□ 1.47
RTN4-210ENST00000427710 CFAP43Q8NDM7 1665 aa24.22■■□□□ 1.47
RTN4-210ENST00000427710 ATP1B4Q9UN42 357 aaPredicted RBP24.22■■□□□ 1.47
RTN4-210ENST00000427710 CDK13Q14004 1512 aaKnown RBP24.2■■□□□ 1.46
RTN4-210ENST00000427710 FMN1Q68DA7 1419 aa24.18■■□□□ 1.46
RTN4-210ENST00000427710 CD109Q6YHK3 1445 aa24.18■■□□□ 1.46
RTN4-210ENST00000427710 LRRIQ1Q96JM4 1722 aa24.15■■□□□ 1.46
RTN4-210ENST00000427710 HECW1Q76N89 1606 aa24.15■■□□□ 1.46
RTN4-210ENST00000427710 TEX14Q8IWB6 1497 aa24.13■■□□□ 1.45
RTN4-210ENST00000427710 CLIP1P30622 1438 aa24.13■■□□□ 1.45
RTN4-210ENST00000427710 ABCA9Q8IUA7 1624 aa24.12■■□□□ 1.45
RTN4-210ENST00000427710 COL17A1Q9UMD9 1497 aaPredicted RBP24.12■■□□□ 1.45
RTN4-210ENST00000427710 PLEKHD1A6NEE1 506 aa24.11■■□□□ 1.45
RTN4-210ENST00000427710 LOC105371045A0A1W2PR82 267 aa24.1■■□□□ 1.45
RTN4-210ENST00000427710 MAGI3Q5TCQ9 1506 aa24.1■■□□□ 1.45
RTN4-210ENST00000427710 PCF11O94913 1555 aaKnown RBP24.09■■□□□ 1.45
RTN4-210ENST00000427710 CASKIN1Q8WXD9 1431 aa24.01■■□□□ 1.43
RTN4-210ENST00000427710 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.01■■□□□ 1.433e-15■■□□□ 12.6
RTN4-210ENST00000427710 TTC37Q6PGP7 1564 aa24.01■■□□□ 1.43
RTN4-210ENST00000427710 CEP162Q5TB80 1403 aa24■■□□□ 1.43
RTN4-210ENST00000427710 KIF14Q15058 1648 aa23.96■■□□□ 1.43
RTN4-210ENST00000427710 FYCO1Q9BQS8 1478 aa23.94■■□□□ 1.42
RTN4-210ENST00000427710 CDK11AQ9UQ88 783 aaPredicted RBP23.93■■□□□ 1.42
RTN4-210ENST00000427710 CCDC18Q5T9S5 1454 aa23.91■■□□□ 1.42
RTN4-210ENST00000427710 TROQ12816 1431 aaPredicted RBP23.91■■□□□ 1.42
RTN4-210ENST00000427710 MYO5CQ9NQX4 1742 aa23.89■■□□□ 1.41
RTN4-210ENST00000427710 ARAP3Q8WWN8 1544 aa23.89■■□□□ 1.41
RTN4-210ENST00000427710 NEO1Q92859 1461 aa23.88■■□□□ 1.41
RTN4-210ENST00000427710 RAPGEF3O95398 923 aa23.86■■□□□ 1.41
RTN4-210ENST00000427710 FANCAO15360 1455 aa23.86■■□□□ 1.41
RTN4-210ENST00000427710 AEBP2Q6ZN18 517 aaPredicted RBP23.84■■□□□ 1.41
RTN4-210ENST00000427710 AKNAQ7Z591 1439 aa23.84■■□□□ 1.41
RTN4-210ENST00000427710 CFAP74Q9C0B2 1584 aa23.83■■□□□ 1.41
RTN4-210ENST00000427710 PHLDB1Q86UU1 1377 aa23.83■■□□□ 1.41
RTN4-210ENST00000427710 FRMPD1Q5SYB0 1578 aa23.82■■□□□ 1.4
RTN4-210ENST00000427710 PLCH2O75038 1416 aa23.82■■□□□ 1.4
RTN4-210ENST00000427710 RICTORQ6R327 1708 aa23.79■■□□□ 1.4
RTN4-210ENST00000427710 CDC42BPBQ9Y5S2 1711 aa23.79■■□□□ 1.4
RTN4-210ENST00000427710 KDM4FA0A1W2PPD8 638 aa23.79■■□□□ 1.4
RTN4-210ENST00000427710 CDC42BPAQ5VT25 1732 aa23.76■■□□□ 1.39
RTN4-210ENST00000427710 DENND4BO75064 1496 aaPredicted RBP23.75■■□□□ 1.39
RTN4-210ENST00000427710 ARHGAP5Q13017 1502 aa23.75■■□□□ 1.39
RTN4-210ENST00000427710 ADGRL1O94910 1474 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms