RNA–Protein interactions for RNA: ENST00000427531.6

ESR1-206, Transcript of estrogen receptor 1, humanhuman

TSL 1 (best) BASIC

Gene ESR1, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESR1-206ENST00000427531 TRIM52Q96A61 297 aa12.11□□□□□ -0.47
ESR1-206ENST00000427531 RB1CC1Q8TDY2 1594 aa12.1□□□□□ -0.47
ESR1-206ENST00000427531 CHAF1AQ13111 956 aaPredicted RBP12.1□□□□□ -0.47
ESR1-206ENST00000427531 MROH2BQ7Z745 1585 aa12.05□□□□□ -0.48
ESR1-206ENST00000427531 ARXQ96QS3 562 aa12.05□□□□□ -0.48
ESR1-206ENST00000427531 GOLGA6L6A8MZA4 724 aa12.05□□□□□ -0.48
ESR1-206ENST00000427531 NRDCO43847 1150 aa12.05□□□□□ -0.48
ESR1-206ENST00000427531 CEP162Q5TB80 1403 aa12.01□□□□□ -0.49
ESR1-206ENST00000427531 TONSLQ96HA7 1378 aa12.01□□□□□ -0.49
ESR1-206ENST00000427531 IRX6P78412 446 aaPredicted RBP12.01□□□□□ -0.49
ESR1-206ENST00000427531 MSNP26038 577 aaKnown RBP12□□□□□ -0.49
ESR1-206ENST00000427531 NOP58Q9Y2X3 529 aaKnown RBP12□□□□□ -0.49
ESR1-206ENST00000427531 RSPH6AQ9H0K4 717 aa12□□□□□ -0.49
ESR1-206ENST00000427531 DEKP35659 375 aaKnown RBP12□□□□□ -0.49
ESR1-206ENST00000427531 TULP1O00294 542 aaPredicted RBP11.99□□□□□ -0.49
ESR1-206ENST00000427531 KLHL34Q8N239 644 aa11.99□□□□□ -0.49
ESR1-206ENST00000427531 ARID4BQ4LE39 1312 aaPredicted RBP11.98□□□□□ -0.49
ESR1-206ENST00000427531 FAM9BQ8IZU0 186 aa11.98□□□□□ -0.49
ESR1-206ENST00000427531 PKNOX2Q96KN3 472 aa11.97□□□□□ -0.49
ESR1-206ENST00000427531 ZRSR1Q15695 479 aaKnown RBP11.97□□□□□ -0.49
ESR1-206ENST00000427531 TSHZ2Q9NRE2 1034 aa11.97□□□□□ -0.49
ESR1-206ENST00000427531 WIZO95785 1651 aa11.96□□□□□ -0.5
ESR1-206ENST00000427531 PNNQ9H307 717 aaKnown RBP11.95□□□□□ -0.5
ESR1-206ENST00000427531 USP35Q9P2H5 1018 aa11.95□□□□□ -0.5
ESR1-206ENST00000427531 RBM19Q9Y4C8 960 aaKnown RBP11.95□□□□□ -0.5
ESR1-206ENST00000427531 AMER1Q5JTC6 1135 aaPredicted RBP11.94□□□□□ -0.5
ESR1-206ENST00000427531 TIMELESSQ9UNS1 1208 aa11.93□□□□□ -0.5
ESR1-206ENST00000427531 CLIP1P30622 1438 aa11.93□□□□□ -0.5
ESR1-206ENST00000427531 SETQ01105 290 aaPredicted RBP11.92□□□□□ -0.5
ESR1-206ENST00000427531 HSP90AA2PQ14568 343 aaPredicted RBP11.92□□□□□ -0.5
ESR1-206ENST00000427531 BAZ1AQ9NRL2 1556 aaPredicted RBP11.91□□□□□ -0.5
ESR1-206ENST00000427531 HOMEZQ8IX15 550 aa11.9□□□□□ -0.5
ESR1-206ENST00000427531 TNIKQ9UKE5 1360 aa11.9□□□□□ -0.5
ESR1-206ENST00000427531 A0A0U1RQG5 324 aaPredicted RBP11.9□□□□□ -0.5
ESR1-206ENST00000427531 GOLGA3Q08378 1498 aa11.9□□□□□ -0.5
ESR1-206ENST00000427531 EEA1Q15075 1411 aa11.89□□□□□ -0.51
ESR1-206ENST00000427531 UBE2Q2Q8WVN8 375 aa11.89□□□□□ -0.51
ESR1-206ENST00000427531 PABPN1Q86U42 306 aaKnown RBP eCLIP11.89□□□□□ -0.51
ESR1-206ENST00000427531 MRS2Q9HD23 443 aa11.89□□□□□ -0.51
ESR1-206ENST00000427531 LAS1LQ9Y4W2 734 aaKnown RBP11.89□□□□□ -0.51
ESR1-206ENST00000427531 HIRIP3Q9BW71 556 aaPredicted RBP11.88□□□□□ -0.51
ESR1-206ENST00000427531 PPP4R2Q9NY27 417 aa11.87□□□□□ -0.51
ESR1-206ENST00000427531 VSIG10Q8N0Z9 540 aa11.86□□□□□ -0.51
ESR1-206ENST00000427531 MYH16Q9H6N6 1097 aa11.85□□□□□ -0.51
ESR1-206ENST00000427531 APPP05067 770 aa11.84□□□□□ -0.51
ESR1-206ENST00000427531 PDE4CQ08493 712 aa11.84□□□□□ -0.51
ESR1-206ENST00000427531 GOLGA6L3A6NEY3 463 aa11.84□□□□□ -0.51
ESR1-206ENST00000427531 ANO8Q9HCE9 1232 aaPredicted RBP11.84□□□□□ -0.51
ESR1-206ENST00000427531 P3H3Q8IVL6 736 aa11.83□□□□□ -0.52
ESR1-206ENST00000427531 PDIA4P13667 645 aaKnown RBP11.82□□□□□ -0.52
ESR1-206ENST00000427531 KIAA2012Q0VF49 1180 aa11.82□□□□□ -0.52
ESR1-206ENST00000427531 GOLGA6L1Q8N7Z2 621 aa11.82□□□□□ -0.52
ESR1-206ENST00000427531 CASC1Q6TDU7 716 aa11.8□□□□□ -0.52
ESR1-206ENST00000427531 TMC1Q8TDI8 760 aa11.79□□□□□ -0.52
ESR1-206ENST00000427531 SMARCA4P51532 1647 aa11.77□□□□□ -0.52
ESR1-206ENST00000427531 CCER2I3L3R5 266 aa11.77□□□□□ -0.52
ESR1-206ENST00000427531 TOP2AP11388 1531 aaKnown RBP11.77□□□□□ -0.53
ESR1-206ENST00000427531 CCDC88BA6NC98 1476 aa11.76□□□□□ -0.53
ESR1-206ENST00000427531 EIF4G2P78344 907 aaKnown RBP eCLIP11.76□□□□□ -0.53
ESR1-206ENST00000427531 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.76□□□□□ -0.53
ESR1-206ENST00000427531 HAP1P54257 671 aaPredicted RBP11.75□□□□□ -0.53
ESR1-206ENST00000427531 C14orf37Q86TY3 774 aa11.75□□□□□ -0.53
ESR1-206ENST00000427531 SALL2Q9Y467 1007 aaPredicted RBP11.75□□□□□ -0.53
ESR1-206ENST00000427531 CEP164Q9UPV0 1460 aa11.74□□□□□ -0.53
ESR1-206ENST00000427531 B4GALNT3Q6L9W6 998 aa11.73□□□□□ -0.53
ESR1-206ENST00000427531 CFAP44Q96MT7 982 aa11.73□□□□□ -0.53
ESR1-206ENST00000427531 ABCC8Q09428 1581 aa11.73□□□□□ -0.53
ESR1-206ENST00000427531 MTERF4Q7Z6M4 381 aaKnown RBP11.7□□□□□ -0.54
ESR1-206ENST00000427531 PLCB2Q00722 1185 aa11.7□□□□□ -0.54
ESR1-206ENST00000427531 NOM1Q5C9Z4 860 aaKnown RBP11.69□□□□□ -0.54
ESR1-206ENST00000427531 SMARCA2P51531 1590 aa11.69□□□□□ -0.54
ESR1-206ENST00000427531 UNC13AQ9UPW8 1703 aa11.69□□□□□ -0.54
ESR1-206ENST00000427531 MAP7D2Q96T17 732 aa11.69□□□□□ -0.54
ESR1-206ENST00000427531 WDR43Q15061 677 aaKnown RBP eCLIP11.68□□□□□ -0.54
ESR1-206ENST00000427531 SIN3AQ96ST3 1273 aa11.68□□□□□ -0.54
ESR1-206ENST00000427531 GBP4Q96PP9 640 aa11.68□□□□□ -0.54
ESR1-206ENST00000427531 HSP90AB1P08238 724 aaKnown RBP11.67□□□□□ -0.54
ESR1-206ENST00000427531 CHMP4BQ9H444 224 aaKnown RBP11.67□□□□□ -0.54
ESR1-206ENST00000427531 EIF4G1Q04637 1599 aaKnown RBP11.66□□□□□ -0.54
ESR1-206ENST00000427531 HSCBQ8IWL3 235 aa11.66□□□□□ -0.54
ESR1-206ENST00000427531 GPS2Q13227 327 aa11.66□□□□□ -0.54
ESR1-206ENST00000427531 NOC3LQ8WTT2 800 aaKnown RBP11.66□□□□□ -0.54
ESR1-206ENST00000427531 GOLGA6L4A6NEF3 574 aa11.66□□□□□ -0.54
ESR1-206ENST00000427531 SYAP1Q96A49 352 aaPredicted RBP11.66□□□□□ -0.54
ESR1-206ENST00000427531 HTATSF1O43719 755 aaKnown RBP11.65□□□□□ -0.54
ESR1-206ENST00000427531 WRNQ14191 1432 aaPredicted RBP eCLIP11.65□□□□□ -0.54
ESR1-206ENST00000427531 DRC7Q8IY82 874 aa11.65□□□□□ -0.54
ESR1-206ENST00000427531 SOGA1O94964 1423 aa11.65□□□□□ -0.54
ESR1-206ENST00000427531 CHIC2Q9UKJ5 165 aa11.65□□□□□ -0.55
ESR1-206ENST00000427531 ZNF771Q7L3S4 317 aaPredicted RBP11.64□□□□□ -0.55
ESR1-206ENST00000427531 CCNB3Q8WWL7 1395 aa11.64□□□□□ -0.55
ESR1-206ENST00000427531 TEX35Q5T0J7 233 aa11.63□□□□□ -0.55
ESR1-206ENST00000427531 VPS8Q8N3P4 1428 aa11.62□□□□□ -0.55
ESR1-206ENST00000427531 BICRAQ9NZM4 1560 aa11.62□□□□□ -0.55
ESR1-206ENST00000427531 FANCIQ9NVI1 1328 aa11.62□□□□□ -0.55
ESR1-206ENST00000427531 ARID3CA6NKF2 412 aa11.61□□□□□ -0.55
ESR1-206ENST00000427531 MTUS2Q5JR59 1369 aa11.61□□□□□ -0.55
ESR1-206ENST00000427531 CCDC66A2RUB6 948 aa11.6□□□□□ -0.55
ESR1-206ENST00000427531 MS4A1P11836 297 aa11.59□□□□□ -0.55
ESR1-206ENST00000427531 IPO9Q96P70 1041 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms