RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 KIF21BO75037 1637 aa29■■■□□ 2.23
AC055811.2-201ENST00000427497 EHMT2Q96KQ7 1210 aa28.95■■■□□ 2.22
AC055811.2-201ENST00000427497 GOLGA3Q08378 1498 aa28.93■■■□□ 2.22
AC055811.2-201ENST00000427497 SHROOM2Q13796 1616 aa28.91■■■□□ 2.22
AC055811.2-201ENST00000427497 ERCC6L2Q5T890 1561 aa28.9■■■□□ 2.22
AC055811.2-201ENST00000427497 PRXQ9BXM0 1461 aa28.86■■■□□ 2.21
AC055811.2-201ENST00000427497 TNIKQ9UKE5 1360 aa28.84■■■□□ 2.21
AC055811.2-201ENST00000427497 IGF1RP08069 1367 aa28.83■■■□□ 2.21
AC055811.2-201ENST00000427497 TRHP20396 242 aaPredicted RBP28.82■■■□□ 2.2
AC055811.2-201ENST00000427497 RAPGEF2Q9Y4G8 1499 aa28.8■■■□□ 2.2
AC055811.2-201ENST00000427497 CUL7Q14999 1698 aa28.8■■■□□ 2.2
AC055811.2-201ENST00000427497 PRG4Q92954 1404 aaPredicted RBP28.73■■■□□ 2.19
AC055811.2-201ENST00000427497 JPH4Q96JJ6 628 aa28.73■■■□□ 2.19
AC055811.2-201ENST00000427497 UBTFP17480 764 aaKnown RBP28.72■■■□□ 2.19
AC055811.2-201ENST00000427497 CEP162Q5TB80 1403 aa28.67■■■□□ 2.18
AC055811.2-201ENST00000427497 KIAA0586Q9BVV6 1533 aa28.64■■■□□ 2.18
AC055811.2-201ENST00000427497 CARMIL1Q5VZK9 1371 aa28.64■■■□□ 2.17
AC055811.2-201ENST00000427497 CLIP1P30622 1438 aa28.45■■■□□ 2.14
AC055811.2-201ENST00000427497 IQGAP2Q13576 1575 aa28.43■■■□□ 2.14
AC055811.2-201ENST00000427497 ADCY10Q96PN6 1610 aa28.39■■■□□ 2.13
AC055811.2-201ENST00000427497 CARMIL2Q6F5E8 1435 aa28.34■■■□□ 2.13
AC055811.2-201ENST00000427497 KIF13AQ9H1H9 1805 aa28.33■■■□□ 2.13
AC055811.2-201ENST00000427497 PTPRGP23470 1445 aa28.31■■■□□ 2.12
AC055811.2-201ENST00000427497 NPM1P06748 294 aaKnown RBP eCLIP28.31■■■□□ 2.12
AC055811.2-201ENST00000427497 MAPKBP1O60336 1514 aa28.29■■■□□ 2.12
AC055811.2-201ENST00000427497 CTTNBP2Q8WZ74 1663 aa28.28■■■□□ 2.12
AC055811.2-201ENST00000427497 DISP1Q96F81 1524 aa28.26■■■□□ 2.11
AC055811.2-201ENST00000427497 UGGT2Q9NYU1 1516 aa28.25■■■□□ 2.11
AC055811.2-201ENST00000427497 TTBK1Q5TCY1 1321 aaPredicted RBP28.23■■■□□ 2.11
AC055811.2-201ENST00000427497 ABCC10Q5T3U5 1492 aa28.21■■■□□ 2.11
AC055811.2-201ENST00000427497 VPS8Q8N3P4 1428 aa28.21■■■□□ 2.11
AC055811.2-201ENST00000427497 ARHGAP35Q9NRY4 1499 aa28.21■■■□□ 2.11
AC055811.2-201ENST00000427497 RANGAP1P46060 587 aaPredicted RBP28.2■■■□□ 2.11
AC055811.2-201ENST00000427497 DIP2BQ9P265 1576 aa28.17■■■□□ 2.1
AC055811.2-201ENST00000427497 KIAA0556O60303 1618 aa28.16■■■□□ 2.1
AC055811.2-201ENST00000427497 FAM69CQ0P6D2 419 aa28.16■■■□□ 2.1
AC055811.2-201ENST00000427497 ABCC2Q92887 1545 aa28.14■■■□□ 2.1
AC055811.2-201ENST00000427497 UHRF1BP1LA0JNW5 1464 aa28.12■■■□□ 2.09
AC055811.2-201ENST00000427497 UACAQ9BZF9 1416 aa28.11■■■□□ 2.09
AC055811.2-201ENST00000427497 EFCAB5A4FU69 1503 aa28.08■■■□□ 2.09
AC055811.2-201ENST00000427497 ASXL2Q76L83 1435 aa28.01■■■□□ 2.07
AC055811.2-201ENST00000427497 TRIM26Q12899 539 aaPredicted RBP28■■■□□ 2.07
AC055811.2-201ENST00000427497 KDM5BQ9UGL1 1544 aa28■■■□□ 2.07
AC055811.2-201ENST00000427497 PLB1Q6P1J6 1458 aa27.99■■■□□ 2.07
AC055811.2-201ENST00000427497 SAMD9Q5K651 1589 aa27.99■■■□□ 2.07
AC055811.2-201ENST00000427497 TSPOAP1O95153 1857 aa27.98■■■□□ 2.07
AC055811.2-201ENST00000427497 ZCCHC11Q5TAX3 1644 aaKnown RBP27.96■■■□□ 2.07
AC055811.2-201ENST00000427497 PCGF6Q9BYE7 350 aa27.94■■■□□ 2.06
AC055811.2-201ENST00000427497 PPARGC1BQ86YN6 1023 aaKnown RBP27.93■■■□□ 2.06
AC055811.2-201ENST00000427497 GLI2P10070 1586 aa27.91■■■□□ 2.06
AC055811.2-201ENST00000427497 FHOD3Q2V2M9 1422 aa27.9■■■□□ 2.06
AC055811.2-201ENST00000427497 ABCA8O94911 1581 aa27.88■■■□□ 2.05
AC055811.2-201ENST00000427497 P3H3Q8IVL6 736 aa27.85■■■□□ 2.05
AC055811.2-201ENST00000427497 KDM6BO15054 1643 aa27.84■■■□□ 2.05
AC055811.2-201ENST00000427497 EPRSP07814 1512 aaKnown RBP27.84■■■□□ 2.05
AC055811.2-201ENST00000427497 PPRC1Q5VV67 1664 aaKnown RBP27.83■■■□□ 2.05
AC055811.2-201ENST00000427497 APLP2Q06481 763 aa27.83■■■□□ 2.05
AC055811.2-201ENST00000427497 PCF11O94913 1555 aaKnown RBP27.8■■■□□ 2.04
AC055811.2-201ENST00000427497 FMN1Q68DA7 1419 aa27.79■■■□□ 2.04
AC055811.2-201ENST00000427497 MAP3K4Q9Y6R4 1608 aa27.79■■■□□ 2.04
AC055811.2-201ENST00000427497 WDR7Q9Y4E6 1490 aa27.79■■■□□ 2.04
AC055811.2-201ENST00000427497 MAP3K1Q13233 1512 aa27.77■■■□□ 2.04
AC055811.2-201ENST00000427497 FYCO1Q9BQS8 1478 aa27.75■■■□□ 2.03
AC055811.2-201ENST00000427497 CASKIN1Q8WXD9 1431 aa27.75■■■□□ 2.03
AC055811.2-201ENST00000427497 AEBP2Q6ZN18 517 aaPredicted RBP27.73■■■□□ 2.03
AC055811.2-201ENST00000427497 TIAM1Q13009 1591 aa27.7■■■□□ 2.03
AC055811.2-201ENST00000427497 CFAP43Q8NDM7 1665 aa27.67■■■□□ 2.02
AC055811.2-201ENST00000427497 TEX14Q8IWB6 1497 aa27.66■■■□□ 2.02
AC055811.2-201ENST00000427497 KANK4Q5T7N3 995 aaPredicted RBP27.65■■■□□ 2.02
AC055811.2-201ENST00000427497 RAPGEF6Q8TEU7 1601 aa27.65■■■□□ 2.02
AC055811.2-201ENST00000427497 ATP10BO94823 1461 aa27.64■■■□□ 2.02
AC055811.2-201ENST00000427497 ARID3CA6NKF2 412 aa27.62■■■□□ 2.01
AC055811.2-201ENST00000427497 KCNH8Q96L42 1107 aa27.62■■■□□ 2.01
AC055811.2-201ENST00000427497 COL17A1Q9UMD9 1497 aaPredicted RBP27.58■■■□□ 2.01
AC055811.2-201ENST00000427497 CD109Q6YHK3 1445 aa27.58■■■□□ 2.01
AC055811.2-201ENST00000427497 LRRIQ1Q96JM4 1722 aa27.57■■■□□ 2
AC055811.2-201ENST00000427497 LRRC9Q6ZRR7 1453 aa27.56■■■□□ 2
AC055811.2-201ENST00000427497 MAGI3Q5TCQ9 1506 aa27.56■■■□□ 2
AC055811.2-201ENST00000427497 NUP153P49790 1475 aaKnown RBP27.54■■■□□ 2
AC055811.2-201ENST00000427497 HECW1Q76N89 1606 aa27.53■■■□□ 2
AC055811.2-201ENST00000427497 ATP1B4Q9UN42 357 aaPredicted RBP27.52■■■□□ 2
AC055811.2-201ENST00000427497 CCDC18Q5T9S5 1454 aa27.47■■□□□ 1.99
AC055811.2-201ENST00000427497 ABCA9Q8IUA7 1624 aa27.46■■□□□ 1.99
AC055811.2-201ENST00000427497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.46■■□□□ 1.99
AC055811.2-201ENST00000427497 HNRNPUL2Q1KMD3 747 aaKnown RBP27.46■■□□□ 1.99
AC055811.2-201ENST00000427497 KDM4FA0A1W2PPD8 638 aa27.43■■□□□ 1.98
AC055811.2-201ENST00000427497 RRBP1Q9P2E9 1410 aaKnown RBP27.39■■□□□ 1.97
AC055811.2-201ENST00000427497 PLEKHD1A6NEE1 506 aa27.34■■□□□ 1.97
AC055811.2-201ENST00000427497 EHBP1L1Q8N3D4 1523 aa27.34■■□□□ 1.97
AC055811.2-201ENST00000427497 ARAP3Q8WWN8 1544 aa27.34■■□□□ 1.97
AC055811.2-201ENST00000427497 MTUS2Q5JR59 1369 aa27.33■■□□□ 1.97
AC055811.2-201ENST00000427497 CDK13Q14004 1512 aaKnown RBP27.33■■□□□ 1.97
AC055811.2-201ENST00000427497 PHLDB1Q86UU1 1377 aa27.29■■□□□ 1.96
AC055811.2-201ENST00000427497 ADGRL1O94910 1474 aa27.29■■□□□ 1.96
AC055811.2-201ENST00000427497 NEO1Q92859 1461 aa27.27■■□□□ 1.96
AC055811.2-201ENST00000427497 CCNB3Q8WWL7 1395 aa27.26■■□□□ 1.95
AC055811.2-201ENST00000427497 SUPT6HQ7KZ85 1726 aaKnown RBP27.26■■□□□ 1.95
AC055811.2-201ENST00000427497 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.24■■□□□ 1.958e-7■■■■■ 51
AC055811.2-201ENST00000427497 NCOA2Q15596 1464 aa27.21■■□□□ 1.95
AC055811.2-201ENST00000427497 TTC37Q6PGP7 1564 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms