RNA–Protein interactions for RNA: ENST00000427167.5

SEMA3C-204, Transcript of semaphorin 3C, humanhuman

TSL 3

Gene SEMA3C, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-204ENST00000427167 JPH4Q96JJ6 628 aa38.99■■■■□ 3.83
SEMA3C-204ENST00000427167 PRG4Q92954 1404 aaPredicted RBP38.98■■■■□ 3.83
SEMA3C-204ENST00000427167 CARMIL1Q5VZK9 1371 aa38.95■■■■□ 3.83
SEMA3C-204ENST00000427167 KIAA0586Q9BVV6 1533 aa38.87■■■■□ 3.81
SEMA3C-204ENST00000427167 RAPGEF2Q9Y4G8 1499 aa38.67■■■■□ 3.78
SEMA3C-204ENST00000427167 IQGAP2Q13576 1575 aa38.61■■■■□ 3.77
SEMA3C-204ENST00000427167 CARMIL2Q6F5E8 1435 aa38.5■■■■□ 3.75
SEMA3C-204ENST00000427167 TTBK1Q5TCY1 1321 aaPredicted RBP38.5■■■■□ 3.75
SEMA3C-204ENST00000427167 ADCY10Q96PN6 1610 aa38.45■■■■□ 3.75
SEMA3C-204ENST00000427167 PTPRGP23470 1445 aa38.44■■■■□ 3.74
SEMA3C-204ENST00000427167 NPM1P06748 294 aaKnown RBP eCLIP38.42■■■■□ 3.74
SEMA3C-204ENST00000427167 TNIKQ9UKE5 1360 aa38.41■■■■□ 3.74
SEMA3C-204ENST00000427167 PRXQ9BXM0 1461 aa38.39■■■■□ 3.74
SEMA3C-204ENST00000427167 DISP1Q96F81 1524 aa38.37■■■■□ 3.73
SEMA3C-204ENST00000427167 CTTNBP2Q8WZ74 1663 aa38.36■■■■□ 3.73
SEMA3C-204ENST00000427167 UGGT2Q9NYU1 1516 aa38.35■■■■□ 3.73
SEMA3C-204ENST00000427167 MAPKBP1O60336 1514 aa38.27■■■■□ 3.72
SEMA3C-204ENST00000427167 KIAA0556O60303 1618 aa38.26■■■■□ 3.71
SEMA3C-204ENST00000427167 KIF13AQ9H1H9 1805 aa38.26■■■■□ 3.71
SEMA3C-204ENST00000427167 CSRNP3Q8WYN3 585 aa38.25■■■■□ 3.71
SEMA3C-204ENST00000427167 ABCC10Q5T3U5 1492 aa38.17■■■■□ 3.7
SEMA3C-204ENST00000427167 EEA1Q15075 1411 aa38.17■■■■□ 3.7
SEMA3C-204ENST00000427167 FAM69CQ0P6D2 419 aa38.16■■■■□ 3.7
SEMA3C-204ENST00000427167 UACAQ9BZF9 1416 aa38.15■■■■□ 3.7
SEMA3C-204ENST00000427167 ABCC2Q92887 1545 aa38.15■■■■□ 3.7
SEMA3C-204ENST00000427167 FAM9AQ8IZU1 332 aaPredicted RBP38.14■■■■□ 3.7
SEMA3C-204ENST00000427167 DIP2BQ9P265 1576 aa38.11■■■■□ 3.69
SEMA3C-204ENST00000427167 UHRF1BP1LA0JNW5 1464 aa38.11■■■■□ 3.69
SEMA3C-204ENST00000427167 GOLGA3Q08378 1498 aa38.11■■■■□ 3.69
SEMA3C-204ENST00000427167 CHIC1Q5VXU3 224 aa38.05■■■■□ 3.68
SEMA3C-204ENST00000427167 ASXL2Q76L83 1435 aa37.98■■■■□ 3.67
SEMA3C-204ENST00000427167 PLB1Q6P1J6 1458 aa37.95■■■■□ 3.67
SEMA3C-204ENST00000427167 KDM5BQ9UGL1 1544 aa37.94■■■■□ 3.66
SEMA3C-204ENST00000427167 ZCCHC11Q5TAX3 1644 aaKnown RBP37.91■■■■□ 3.66
SEMA3C-204ENST00000427167 P3H3Q8IVL6 736 aa37.91■■■■□ 3.66
SEMA3C-204ENST00000427167 TSPOAP1O95153 1857 aa37.88■■■■□ 3.65
SEMA3C-204ENST00000427167 ABCA8O94911 1581 aa37.85■■■■□ 3.65
SEMA3C-204ENST00000427167 KIF21BO75037 1637 aa37.84■■■■□ 3.65
SEMA3C-204ENST00000427167 RANGAP1P46060 587 aaPredicted RBP37.84■■■■□ 3.65
SEMA3C-204ENST00000427167 SAMD9Q5K651 1589 aa37.8■■■■□ 3.64
SEMA3C-204ENST00000427167 EHMT2Q96KQ7 1210 aa37.77■■■■□ 3.64
SEMA3C-204ENST00000427167 GLI2P10070 1586 aa37.76■■■■□ 3.63
SEMA3C-204ENST00000427167 EPRSP07814 1512 aaKnown RBP37.74■■■■□ 3.63
SEMA3C-204ENST00000427167 WDR7Q9Y4E6 1490 aa37.7■■■■□ 3.63
SEMA3C-204ENST00000427167 ARID3CA6NKF2 412 aa37.68■■■■□ 3.62
SEMA3C-204ENST00000427167 KDM6BO15054 1643 aa37.67■■■■□ 3.62
SEMA3C-204ENST00000427167 PPRC1Q5VV67 1664 aaKnown RBP37.63■■■■□ 3.61
SEMA3C-204ENST00000427167 FHOD3Q2V2M9 1422 aa37.62■■■■□ 3.61
SEMA3C-204ENST00000427167 UBTFP17480 764 aaKnown RBP37.62■■■■□ 3.61
SEMA3C-204ENST00000427167 MAP3K4Q9Y6R4 1608 aa37.61■■■■□ 3.61
SEMA3C-204ENST00000427167 RAPGEF6Q8TEU7 1601 aa37.58■■■■□ 3.61
SEMA3C-204ENST00000427167 KCNH8Q96L42 1107 aa37.56■■■■□ 3.6
SEMA3C-204ENST00000427167 ATP10BO94823 1461 aa37.54■■■■□ 3.6
SEMA3C-204ENST00000427167 EFCAB5A4FU69 1503 aa37.54■■■■□ 3.6
SEMA3C-204ENST00000427167 TEX14Q8IWB6 1497 aa37.47■■■■□ 3.59
SEMA3C-204ENST00000427167 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.45■■■■□ 3.59
SEMA3C-204ENST00000427167 HNRNPUL2Q1KMD3 747 aaKnown RBP37.45■■■■□ 3.59
SEMA3C-204ENST00000427167 NUP153P49790 1475 aaKnown RBP37.43■■■■□ 3.58
SEMA3C-204ENST00000427167 CFAP43Q8NDM7 1665 aa37.41■■■■□ 3.58
SEMA3C-204ENST00000427167 AEBP2Q6ZN18 517 aaPredicted RBP37.41■■■■□ 3.58
SEMA3C-204ENST00000427167 CD109Q6YHK3 1445 aa37.41■■■■□ 3.58
SEMA3C-204ENST00000427167 COL17A1Q9UMD9 1497 aaPredicted RBP37.33■■■■□ 3.57
SEMA3C-204ENST00000427167 MAGI3Q5TCQ9 1506 aa37.32■■■■□ 3.57
SEMA3C-204ENST00000427167 ARHGAP35Q9NRY4 1499 aa37.3■■■■□ 3.56
SEMA3C-204ENST00000427167 ABCA9Q8IUA7 1624 aa37.23■■■■□ 3.55
SEMA3C-204ENST00000427167 FMN1Q68DA7 1419 aa37.21■■■■□ 3.55
SEMA3C-204ENST00000427167 ATP1B4Q9UN42 357 aaPredicted RBP37.19■■■■□ 3.54
SEMA3C-204ENST00000427167 PLEKHD1A6NEE1 506 aa37.18■■■■□ 3.54
SEMA3C-204ENST00000427167 CDK13Q14004 1512 aaKnown RBP37.16■■■■□ 3.54
SEMA3C-204ENST00000427167 HECW1Q76N89 1606 aa37.12■■■■□ 3.53
SEMA3C-204ENST00000427167 KDM4FA0A1W2PPD8 638 aa37.02■■■■□ 3.52
SEMA3C-204ENST00000427167 ARAP3Q8WWN8 1544 aa37■■■■□ 3.51
SEMA3C-204ENST00000427167 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.99■■■■□ 3.51
SEMA3C-204ENST00000427167 NEO1Q92859 1461 aa36.97■■■■□ 3.51
SEMA3C-204ENST00000427167 TTC37Q6PGP7 1564 aa36.96■■■■□ 3.51
SEMA3C-204ENST00000427167 PHLDB1Q86UU1 1377 aa36.96■■■■□ 3.51
SEMA3C-204ENST00000427167 CLIP1P30622 1438 aa36.93■■■■□ 3.5
SEMA3C-204ENST00000427167 PCF11O94913 1555 aaKnown RBP36.91■■■■□ 3.5
SEMA3C-204ENST00000427167 CDK11AQ9UQ88 783 aaPredicted RBP36.9■■■■□ 3.5
SEMA3C-204ENST00000427167 LRRIQ1Q96JM4 1722 aa36.9■■■■□ 3.5
SEMA3C-204ENST00000427167 ADGRL1O94910 1474 aa36.89■■■■□ 3.5
SEMA3C-204ENST00000427167 RAPGEF3O95398 923 aa36.87■■■■□ 3.49
SEMA3C-204ENST00000427167 CASKIN1Q8WXD9 1431 aa36.86■■■■□ 3.49
SEMA3C-204ENST00000427167 FANCAO15360 1455 aa36.86■■■■□ 3.49
SEMA3C-204ENST00000427167 CFAP74Q9C0B2 1584 aa36.83■■■■□ 3.49
SEMA3C-204ENST00000427167 AKNAQ7Z591 1439 aa36.8■■■■□ 3.48
SEMA3C-204ENST00000427167 TROQ12816 1431 aaPredicted RBP36.79■■■■□ 3.48
SEMA3C-204ENST00000427167 KIF14Q15058 1648 aa36.79■■■■□ 3.48
SEMA3C-204ENST00000427167 FRMPD1Q5SYB0 1578 aa36.78■■■■□ 3.48
SEMA3C-204ENST00000427167 CCDC18Q5T9S5 1454 aa36.77■■■■□ 3.48
SEMA3C-204ENST00000427167 FYCO1Q9BQS8 1478 aa36.75■■■■□ 3.47
SEMA3C-204ENST00000427167 PLCH2O75038 1416 aa36.75■■■■□ 3.47
SEMA3C-204ENST00000427167 DENND4BO75064 1496 aaPredicted RBP36.74■■■■□ 3.47
SEMA3C-204ENST00000427167 MYO5CQ9NQX4 1742 aa36.72■■■■□ 3.47
SEMA3C-204ENST00000427167 RICTORQ6R327 1708 aa36.68■■■■□ 3.46
SEMA3C-204ENST00000427167 CEP162Q5TB80 1403 aa36.65■■■■□ 3.46
SEMA3C-204ENST00000427167 EFCAB2Q5VUJ9 269 aa36.61■■■■□ 3.45
SEMA3C-204ENST00000427167 SCAPERQ9BY12 1400 aa36.6■■■■□ 3.45
SEMA3C-204ENST00000427167 ARHGAP5Q13017 1502 aa36.6■■■■□ 3.45
SEMA3C-204ENST00000427167 ARHGEF40Q8TER5 1519 aa36.56■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms