RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 JPH4Q96JJ6 628 aa29.14■■■□□ 2.26
LMCD1-204ENST00000426878 ERCC6L2Q5T890 1561 aa29.11■■■□□ 2.25
LMCD1-204ENST00000426878 RAPGEF2Q9Y4G8 1499 aa29.09■■■□□ 2.25
LMCD1-204ENST00000426878 PRG4Q92954 1404 aaPredicted RBP29.07■■■□□ 2.24
LMCD1-204ENST00000426878 CHIC1Q5VXU3 224 aa28.99■■■□□ 2.23
LMCD1-204ENST00000426878 PRXQ9BXM0 1461 aa28.99■■■□□ 2.23
LMCD1-204ENST00000426878 EEA1Q15075 1411 aa28.96■■■□□ 2.23
LMCD1-204ENST00000426878 IQGAP2Q13576 1575 aa28.93■■■□□ 2.22
LMCD1-204ENST00000426878 CSRNP3Q8WYN3 585 aa28.92■■■□□ 2.22
LMCD1-204ENST00000426878 CARMIL2Q6F5E8 1435 aa28.82■■■□□ 2.2
LMCD1-204ENST00000426878 UGGT2Q9NYU1 1516 aa28.81■■■□□ 2.2
LMCD1-204ENST00000426878 CTTNBP2Q8WZ74 1663 aa28.79■■■□□ 2.2
LMCD1-204ENST00000426878 DISP1Q96F81 1524 aa28.76■■■□□ 2.19
LMCD1-204ENST00000426878 TNIKQ9UKE5 1360 aa28.74■■■□□ 2.19
LMCD1-204ENST00000426878 PTPRGP23470 1445 aa28.72■■■□□ 2.19
LMCD1-204ENST00000426878 FAM9AQ8IZU1 332 aaPredicted RBP28.7■■■□□ 2.19
LMCD1-204ENST00000426878 TRHP20396 242 aaPredicted RBP28.67■■■□□ 2.18
LMCD1-204ENST00000426878 KIAA0556O60303 1618 aa28.65■■■□□ 2.18
LMCD1-204ENST00000426878 ADCY10Q96PN6 1610 aa28.64■■■□□ 2.17
LMCD1-204ENST00000426878 KIF21BO75037 1637 aa28.63■■■□□ 2.17
LMCD1-204ENST00000426878 GOLGA3Q08378 1498 aa28.62■■■□□ 2.17
LMCD1-204ENST00000426878 NPM1P06748 294 aaKnown RBP eCLIP28.58■■■□□ 2.17
LMCD1-204ENST00000426878 TTBK1Q5TCY1 1321 aaPredicted RBP28.55■■■□□ 2.16
LMCD1-204ENST00000426878 UHRF1BP1LA0JNW5 1464 aa28.54■■■□□ 2.16
LMCD1-204ENST00000426878 UACAQ9BZF9 1416 aa28.53■■■□□ 2.16
LMCD1-204ENST00000426878 MAPKBP1O60336 1514 aa28.52■■■□□ 2.16
LMCD1-204ENST00000426878 ABCC2Q92887 1545 aa28.49■■■□□ 2.15
LMCD1-204ENST00000426878 SAMD9Q5K651 1589 aa28.44■■■□□ 2.14
LMCD1-204ENST00000426878 KDM5BQ9UGL1 1544 aa28.4■■■□□ 2.14
LMCD1-204ENST00000426878 ABCC10Q5T3U5 1492 aa28.39■■■□□ 2.14
LMCD1-204ENST00000426878 PLB1Q6P1J6 1458 aa28.38■■■□□ 2.13
LMCD1-204ENST00000426878 KIF13AQ9H1H9 1805 aa28.37■■■□□ 2.13
LMCD1-204ENST00000426878 ABCA8O94911 1581 aa28.36■■■□□ 2.13
LMCD1-204ENST00000426878 UBTFP17480 764 aaKnown RBP28.35■■■□□ 2.13
LMCD1-204ENST00000426878 P3H3Q8IVL6 736 aa28.35■■■□□ 2.13
LMCD1-204ENST00000426878 DIP2BQ9P265 1576 aa28.31■■■□□ 2.12
LMCD1-204ENST00000426878 EFCAB5A4FU69 1503 aa28.31■■■□□ 2.12
LMCD1-204ENST00000426878 FAM69CQ0P6D2 419 aa28.3■■■□□ 2.12
LMCD1-204ENST00000426878 ASXL2Q76L83 1435 aa28.3■■■□□ 2.12
LMCD1-204ENST00000426878 ZCCHC11Q5TAX3 1644 aaKnown RBP28.28■■■□□ 2.12
LMCD1-204ENST00000426878 EHMT2Q96KQ7 1210 aa28.28■■■□□ 2.12
LMCD1-204ENST00000426878 RANGAP1P46060 587 aaPredicted RBP28.27■■■□□ 2.12
LMCD1-204ENST00000426878 FHOD3Q2V2M9 1422 aa28.23■■■□□ 2.11
LMCD1-204ENST00000426878 GLI2P10070 1586 aa28.18■■■□□ 2.1
LMCD1-204ENST00000426878 RAPGEF6Q8TEU7 1601 aa28.17■■■□□ 2.1
LMCD1-204ENST00000426878 WDR7Q9Y4E6 1490 aa28.15■■■□□ 2.1
LMCD1-204ENST00000426878 ARHGAP35Q9NRY4 1499 aa28.14■■■□□ 2.1
LMCD1-204ENST00000426878 EPRSP07814 1512 aaKnown RBP28.14■■■□□ 2.1
LMCD1-204ENST00000426878 ATP10BO94823 1461 aa28.14■■■□□ 2.09
LMCD1-204ENST00000426878 NUP153P49790 1475 aaKnown RBP28.09■■■□□ 2.09
LMCD1-204ENST00000426878 FMN1Q68DA7 1419 aa28.05■■■□□ 2.08
LMCD1-204ENST00000426878 ARID3CA6NKF2 412 aa28.03■■■□□ 2.08
LMCD1-204ENST00000426878 TSPOAP1O95153 1857 aa28.02■■■□□ 2.08
LMCD1-204ENST00000426878 MAP3K4Q9Y6R4 1608 aa28.02■■■□□ 2.08
LMCD1-204ENST00000426878 KCNH8Q96L42 1107 aa27.98■■■□□ 2.07
LMCD1-204ENST00000426878 PPRC1Q5VV67 1664 aaKnown RBP27.98■■■□□ 2.07
LMCD1-204ENST00000426878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.94■■■□□ 2.06
LMCD1-204ENST00000426878 HNRNPUL2Q1KMD3 747 aaKnown RBP27.94■■■□□ 2.06
LMCD1-204ENST00000426878 CLIP1P30622 1438 aa27.93■■■□□ 2.06
LMCD1-204ENST00000426878 CFAP43Q8NDM7 1665 aa27.92■■■□□ 2.06
LMCD1-204ENST00000426878 TEX14Q8IWB6 1497 aa27.9■■■□□ 2.06
LMCD1-204ENST00000426878 CD109Q6YHK3 1445 aa27.9■■■□□ 2.06
LMCD1-204ENST00000426878 HECW1Q76N89 1606 aa27.89■■■□□ 2.06
LMCD1-204ENST00000426878 PLEKHD1A6NEE1 506 aa27.89■■■□□ 2.06
LMCD1-204ENST00000426878 MAGI3Q5TCQ9 1506 aa27.88■■■□□ 2.05
LMCD1-204ENST00000426878 KDM6BO15054 1643 aa27.87■■■□□ 2.05
LMCD1-204ENST00000426878 ABCA9Q8IUA7 1624 aa27.85■■■□□ 2.05
LMCD1-204ENST00000426878 CDK13Q14004 1512 aaKnown RBP27.84■■■□□ 2.05
LMCD1-204ENST00000426878 CASKIN1Q8WXD9 1431 aa27.82■■■□□ 2.04
LMCD1-204ENST00000426878 ATP1B4Q9UN42 357 aaPredicted RBP27.82■■■□□ 2.04
LMCD1-204ENST00000426878 CEP162Q5TB80 1403 aa27.77■■■□□ 2.04
LMCD1-204ENST00000426878 LOC105371045A0A1W2PR82 267 aa27.76■■■□□ 2.04
LMCD1-204ENST00000426878 CDK11AQ9UQ88 783 aaPredicted RBP27.76■■■□□ 2.04
LMCD1-204ENST00000426878 PCF11O94913 1555 aaKnown RBP27.76■■■□□ 2.03
LMCD1-204ENST00000426878 FYCO1Q9BQS8 1478 aa27.74■■■□□ 2.03
LMCD1-204ENST00000426878 COL17A1Q9UMD9 1497 aaPredicted RBP27.74■■■□□ 2.03
LMCD1-204ENST00000426878 LRRIQ1Q96JM4 1722 aa27.72■■■□□ 2.03
LMCD1-204ENST00000426878 CCDC18Q5T9S5 1454 aa27.72■■■□□ 2.03
LMCD1-204ENST00000426878 PHLDB1Q86UU1 1377 aa27.7■■■□□ 2.03
LMCD1-204ENST00000426878 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.69■■■□□ 2.02
LMCD1-204ENST00000426878 TROQ12816 1431 aaPredicted RBP27.67■■■□□ 2.02
LMCD1-204ENST00000426878 NEO1Q92859 1461 aa27.66■■■□□ 2.02
LMCD1-204ENST00000426878 ARAP3Q8WWN8 1544 aa27.65■■■□□ 2.02
LMCD1-204ENST00000426878 TTC37Q6PGP7 1564 aa27.63■■■□□ 2.01
LMCD1-204ENST00000426878 KIF14Q15058 1648 aa27.58■■■□□ 2.01
LMCD1-204ENST00000426878 PLCH2O75038 1416 aa27.56■■■□□ 2
LMCD1-204ENST00000426878 FANCAO15360 1455 aa27.54■■■□□ 2
LMCD1-204ENST00000426878 CFAP74Q9C0B2 1584 aa27.54■■■□□ 2
LMCD1-204ENST00000426878 AKNAQ7Z591 1439 aa27.51■■□□□ 1.99
LMCD1-204ENST00000426878 MYO5CQ9NQX4 1742 aa27.49■■□□□ 1.99
LMCD1-204ENST00000426878 VPS8Q8N3P4 1428 aa27.47■■□□□ 1.99
LMCD1-204ENST00000426878 EFCAB2Q5VUJ9 269 aa27.46■■□□□ 1.99
LMCD1-204ENST00000426878 RAPGEF3O95398 923 aa27.45■■□□□ 1.98
LMCD1-204ENST00000426878 DENND4BO75064 1496 aaPredicted RBP27.43■■□□□ 1.98
LMCD1-204ENST00000426878 FRMPD1Q5SYB0 1578 aa27.42■■□□□ 1.98
LMCD1-204ENST00000426878 MTUS2Q5JR59 1369 aa27.4■■□□□ 1.98
LMCD1-204ENST00000426878 ADGRL1O94910 1474 aa27.39■■□□□ 1.97
LMCD1-204ENST00000426878 RICTORQ6R327 1708 aa27.39■■□□□ 1.97
LMCD1-204ENST00000426878 ARHGAP5Q13017 1502 aa27.38■■□□□ 1.97
LMCD1-204ENST00000426878 CDC42BPBQ9Y5S2 1711 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms