RNA–Protein interactions for RNA: ENST00000426712.1

COPS6-204, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 716 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-204ENST00000426712 IGF1RP08069 1367 aa15.68■□□□□ 0.1
COPS6-204ENST00000426712 AEBP2Q6ZN18 517 aaPredicted RBP15.66■□□□□ 0.1
COPS6-204ENST00000426712 KIAA0586Q9BVV6 1533 aa15.64■□□□□ 0.09
COPS6-204ENST00000426712 CUL7Q14999 1698 aa15.63■□□□□ 0.09
COPS6-204ENST00000426712 KIF27Q86VH2 1401 aa15.62■□□□□ 0.09
COPS6-204ENST00000426712 ADCY10Q96PN6 1610 aa15.61■□□□□ 0.09
COPS6-204ENST00000426712 MAPKBP1O60336 1514 aa15.61■□□□□ 0.09
COPS6-204ENST00000426712 ABCC10Q5T3U5 1492 aa15.6■□□□□ 0.09
COPS6-204ENST00000426712 NPM1P06748 294 aaKnown RBP eCLIP15.59■□□□□ 0.09
COPS6-204ENST00000426712 FAM69CQ0P6D2 419 aa15.57■□□□□ 0.08
COPS6-204ENST00000426712 DIP2BQ9P265 1576 aa15.55■□□□□ 0.08
COPS6-204ENST00000426712 CARMIL1Q5VZK9 1371 aa15.55■□□□□ 0.08
COPS6-204ENST00000426712 TSPOAP1O95153 1857 aa15.51■□□□□ 0.07
COPS6-204ENST00000426712 PTPRGP23470 1445 aa15.5■□□□□ 0.07
COPS6-204ENST00000426712 TNIKQ9UKE5 1360 aa15.47■□□□□ 0.07
COPS6-204ENST00000426712 CARMIL2Q6F5E8 1435 aa15.46■□□□□ 0.07
COPS6-204ENST00000426712 IQGAP2Q13576 1575 aa15.45■□□□□ 0.06
COPS6-204ENST00000426712 ABCC2Q92887 1545 aa15.43■□□□□ 0.06
COPS6-204ENST00000426712 UHRF1BP1LA0JNW5 1464 aa15.42■□□□□ 0.06
COPS6-204ENST00000426712 KDM6BO15054 1643 aa15.42■□□□□ 0.06
COPS6-204ENST00000426712 DISP1Q96F81 1524 aa15.41■□□□□ 0.06
COPS6-204ENST00000426712 GLI2P10070 1586 aa15.41■□□□□ 0.06
COPS6-204ENST00000426712 PPRC1Q5VV67 1664 aaKnown RBP15.39■□□□□ 0.05
COPS6-204ENST00000426712 PLB1Q6P1J6 1458 aa15.39■□□□□ 0.05
COPS6-204ENST00000426712 RAPGEF2Q9Y4G8 1499 aa15.39■□□□□ 0.05
COPS6-204ENST00000426712 UGGT2Q9NYU1 1516 aa15.38■□□□□ 0.05
COPS6-204ENST00000426712 ASXL2Q76L83 1435 aa15.38■□□□□ 0.05
COPS6-204ENST00000426712 UACAQ9BZF9 1416 aa15.38■□□□□ 0.05
COPS6-204ENST00000426712 KDM4FA0A1W2PPD8 638 aa15.36■□□□□ 0.05
COPS6-204ENST00000426712 TTBK1Q5TCY1 1321 aaPredicted RBP15.36■□□□□ 0.05
COPS6-204ENST00000426712 KDM5BQ9UGL1 1544 aa15.35■□□□□ 0.05
COPS6-204ENST00000426712 KIAA0556O60303 1618 aa15.31■□□□□ 0.04
COPS6-204ENST00000426712 ZCCHC11Q5TAX3 1644 aaKnown RBP15.31■□□□□ 0.04
COPS6-204ENST00000426712 MAP3K4Q9Y6R4 1608 aa15.31■□□□□ 0.04
COPS6-204ENST00000426712 CTTNBP2Q8WZ74 1663 aa15.31■□□□□ 0.04
COPS6-204ENST00000426712 EPRSP07814 1512 aaKnown RBP15.3■□□□□ 0.04
COPS6-204ENST00000426712 COL17A1Q9UMD9 1497 aaPredicted RBP15.27■□□□□ 0.03
COPS6-204ENST00000426712 TEX14Q8IWB6 1497 aa15.22■□□□□ 0.03
COPS6-204ENST00000426712 PRXQ9BXM0 1461 aa15.22■□□□□ 0.03
COPS6-204ENST00000426712 GOLGA3Q08378 1498 aa15.21■□□□□ 0.03
COPS6-204ENST00000426712 ABCA8O94911 1581 aa15.21■□□□□ 0.03
COPS6-204ENST00000426712 WDR7Q9Y4E6 1490 aa15.2■□□□□ 0.02
COPS6-204ENST00000426712 CFAP43Q8NDM7 1665 aa15.18■□□□□ 0.02
COPS6-204ENST00000426712 MAGI3Q5TCQ9 1506 aa15.16■□□□□ 0.02
COPS6-204ENST00000426712 ADGRL1O94910 1474 aa15.15■□□□□ 0.02
COPS6-204ENST00000426712 CD109Q6YHK3 1445 aa15.14■□□□□ 0.01
COPS6-204ENST00000426712 KCNH8Q96L42 1107 aa15.12■□□□□ 0.01
COPS6-204ENST00000426712 ATP10BO94823 1461 aa15.09■□□□□ 0.01
COPS6-204ENST00000426712 CSRNP3Q8WYN3 585 aa15.08■□□□□ 0
COPS6-204ENST00000426712 FAM9AQ8IZU1 332 aaPredicted RBP15.06■□□□□ 0
COPS6-204ENST00000426712 ARAP3Q8WWN8 1544 aa15.06■□□□□ 0
COPS6-204ENST00000426712 SAMD9Q5K651 1589 aa15.06■□□□□ 0
COPS6-204ENST00000426712 P3H3Q8IVL6 736 aa15.04■□□□□ -0
COPS6-204ENST00000426712 ABCA9Q8IUA7 1624 aa15.03■□□□□ -0
COPS6-204ENST00000426712 PHLDB1Q86UU1 1377 aa15.03■□□□□ -0
COPS6-204ENST00000426712 RAPGEF6Q8TEU7 1601 aa15.01□□□□□ -0.01
COPS6-204ENST00000426712 HECW2Q9P2P5 1572 aa14.99□□□□□ -0.01
COPS6-204ENST00000426712 KIF21BO75037 1637 aa14.98□□□□□ -0.01
COPS6-204ENST00000426712 EEA1Q15075 1411 aa14.98□□□□□ -0.01
COPS6-204ENST00000426712 ARID3CA6NKF2 412 aa14.97□□□□□ -0.01
COPS6-204ENST00000426712 ILDR1Q86SU0 546 aaPredicted RBP14.96□□□□□ -0.01
COPS6-204ENST00000426712 NEO1Q92859 1461 aa14.95□□□□□ -0.02
COPS6-204ENST00000426712 NUP153P49790 1475 aaKnown RBP14.95□□□□□ -0.02
COPS6-204ENST00000426712 ADAMTSL3P82987 1691 aa14.93□□□□□ -0.02
COPS6-204ENST00000426712 RAPGEF3O95398 923 aa14.92□□□□□ -0.02
COPS6-204ENST00000426712 FRMPD1Q5SYB0 1578 aa14.9□□□□□ -0.02
COPS6-204ENST00000426712 PLEKHD1A6NEE1 506 aa14.89□□□□□ -0.03
COPS6-204ENST00000426712 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.89□□□□□ -0.03
COPS6-204ENST00000426712 HNRNPUL2Q1KMD3 747 aaKnown RBP14.89□□□□□ -0.03
COPS6-204ENST00000426712 FHOD3Q2V2M9 1422 aa14.89□□□□□ -0.03
COPS6-204ENST00000426712 BCORL1Q5H9F3 1711 aa14.88□□□□□ -0.03
COPS6-204ENST00000426712 RICTORQ6R327 1708 aa14.88□□□□□ -0.03
COPS6-204ENST00000426712 EFCAB5A4FU69 1503 aa14.86□□□□□ -0.03
COPS6-204ENST00000426712 PTPRMP28827 1452 aa14.85□□□□□ -0.03
COPS6-204ENST00000426712 RANGAP1P46060 587 aaPredicted RBP14.85□□□□□ -0.03
COPS6-204ENST00000426712 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.85□□□□□ -0.03
COPS6-204ENST00000426712 AKNAQ7Z591 1439 aa14.83□□□□□ -0.03
COPS6-204ENST00000426712 CFAP74Q9C0B2 1584 aa14.83□□□□□ -0.04
COPS6-204ENST00000426712 DENND4BO75064 1496 aaPredicted RBP14.82□□□□□ -0.04
COPS6-204ENST00000426712 FANCAO15360 1455 aa14.81□□□□□ -0.04
COPS6-204ENST00000426712 TTC37Q6PGP7 1564 aa14.8□□□□□ -0.04
COPS6-204ENST00000426712 ARHGEF40Q8TER5 1519 aa14.79□□□□□ -0.04
COPS6-204ENST00000426712 MADDQ8WXG6 1647 aa14.79□□□□□ -0.04
COPS6-204ENST00000426712 ZMYM4Q5VZL5 1548 aa14.78□□□□□ -0.04
COPS6-204ENST00000426712 ARID4BQ4LE39 1312 aaPredicted RBP14.77□□□□□ -0.04
COPS6-204ENST00000426712 SIGLEC1Q9BZZ2 1709 aa14.77□□□□□ -0.05
COPS6-204ENST00000426712 CDK13Q14004 1512 aaKnown RBP14.76□□□□□ -0.05
COPS6-204ENST00000426712 MAGI2Q86UL8 1455 aa14.76□□□□□ -0.05
COPS6-204ENST00000426712 PLCH2O75038 1416 aa14.75□□□□□ -0.05
COPS6-204ENST00000426712 RIMS1Q86UR5 1692 aaKnown RBP14.75□□□□□ -0.05
COPS6-204ENST00000426712 FMN1Q68DA7 1419 aa14.73□□□□□ -0.05
COPS6-204ENST00000426712 HECW1Q76N89 1606 aa14.73□□□□□ -0.05
COPS6-204ENST00000426712 PCF11O94913 1555 aaKnown RBP14.73□□□□□ -0.05
COPS6-204ENST00000426712 MYO5CQ9NQX4 1742 aa14.72□□□□□ -0.05
COPS6-204ENST00000426712 LMTK3Q96Q04 1460 aa14.72□□□□□ -0.05
COPS6-204ENST00000426712 ARHGAP35Q9NRY4 1499 aa14.72□□□□□ -0.05
COPS6-204ENST00000426712 UBTFP17480 764 aaKnown RBP14.72□□□□□ -0.05
COPS6-204ENST00000426712 ZFYVE16Q7Z3T8 1539 aa14.71□□□□□ -0.05
COPS6-204ENST00000426712 POGZQ7Z3K3 1410 aa14.71□□□□□ -0.05
COPS6-204ENST00000426712 SCAPERQ9BY12 1400 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms