RNA–Protein interactions for RNA: ENST00000426511.5

SEMA3F-205, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-205ENST00000426511 JPH4Q96JJ6 628 aa37.76■■■■□ 3.64
SEMA3F-205ENST00000426511 PRG4Q92954 1404 aaPredicted RBP37.76■■■■□ 3.63
SEMA3F-205ENST00000426511 CARMIL1Q5VZK9 1371 aa37.72■■■■□ 3.63
SEMA3F-205ENST00000426511 KIAA0586Q9BVV6 1533 aa37.61■■■■□ 3.61
SEMA3F-205ENST00000426511 RAPGEF2Q9Y4G8 1499 aa37.43■■■■□ 3.58
SEMA3F-205ENST00000426511 IQGAP2Q13576 1575 aa37.38■■■■□ 3.57
SEMA3F-205ENST00000426511 TTBK1Q5TCY1 1321 aaPredicted RBP37.36■■■■□ 3.57
SEMA3F-205ENST00000426511 CARMIL2Q6F5E8 1435 aa37.28■■■■□ 3.56
SEMA3F-205ENST00000426511 NPM1P06748 294 aaKnown RBP eCLIP37.26■■■■□ 3.56
SEMA3F-205ENST00000426511 PTPRGP23470 1445 aa37.23■■■■□ 3.55
SEMA3F-205ENST00000426511 ADCY10Q96PN6 1610 aa37.21■■■■□ 3.55
SEMA3F-205ENST00000426511 TNIKQ9UKE5 1360 aa37.18■■■■□ 3.54
SEMA3F-205ENST00000426511 PRXQ9BXM0 1461 aa37.13■■■■□ 3.53
SEMA3F-205ENST00000426511 DISP1Q96F81 1524 aa37.12■■■■□ 3.53
SEMA3F-205ENST00000426511 CTTNBP2Q8WZ74 1663 aa37.12■■■■□ 3.53
SEMA3F-205ENST00000426511 UGGT2Q9NYU1 1516 aa37.1■■■■□ 3.53
SEMA3F-205ENST00000426511 CSRNP3Q8WYN3 585 aa37.04■■■■□ 3.52
SEMA3F-205ENST00000426511 KIF13AQ9H1H9 1805 aa37.03■■■■□ 3.52
SEMA3F-205ENST00000426511 MAPKBP1O60336 1514 aa37.02■■■■□ 3.52
SEMA3F-205ENST00000426511 KIAA0556O60303 1618 aa37.02■■■■□ 3.52
SEMA3F-205ENST00000426511 FAM69CQ0P6D2 419 aa36.99■■■■□ 3.51
SEMA3F-205ENST00000426511 FAM9AQ8IZU1 332 aaPredicted RBP36.99■■■■□ 3.51
SEMA3F-205ENST00000426511 ABCC10Q5T3U5 1492 aa36.95■■■■□ 3.51
SEMA3F-205ENST00000426511 UACAQ9BZF9 1416 aa36.94■■■■□ 3.5
SEMA3F-205ENST00000426511 EEA1Q15075 1411 aa36.93■■■■□ 3.5
SEMA3F-205ENST00000426511 ABCC2Q92887 1545 aa36.92■■■■□ 3.5
SEMA3F-205ENST00000426511 GOLGA3Q08378 1498 aa36.89■■■■□ 3.5
SEMA3F-205ENST00000426511 DIP2BQ9P265 1576 aa36.89■■■■□ 3.5
SEMA3F-205ENST00000426511 UHRF1BP1LA0JNW5 1464 aa36.87■■■■□ 3.49
SEMA3F-205ENST00000426511 CHIC1Q5VXU3 224 aa36.83■■■■□ 3.49
SEMA3F-205ENST00000426511 ASXL2Q76L83 1435 aa36.78■■■■□ 3.48
SEMA3F-205ENST00000426511 P3H3Q8IVL6 736 aa36.76■■■■□ 3.48
SEMA3F-205ENST00000426511 PLB1Q6P1J6 1458 aa36.75■■■■□ 3.47
SEMA3F-205ENST00000426511 KDM5BQ9UGL1 1544 aa36.71■■■■□ 3.47
SEMA3F-205ENST00000426511 RANGAP1P46060 587 aaPredicted RBP36.71■■■■□ 3.47
SEMA3F-205ENST00000426511 ZCCHC11Q5TAX3 1644 aaKnown RBP36.7■■■■□ 3.47
SEMA3F-205ENST00000426511 TSPOAP1O95153 1857 aa36.69■■■■□ 3.46
SEMA3F-205ENST00000426511 EHMT2Q96KQ7 1210 aa36.65■■■■□ 3.46
SEMA3F-205ENST00000426511 ABCA8O94911 1581 aa36.61■■■■□ 3.45
SEMA3F-205ENST00000426511 KIF21BO75037 1637 aa36.61■■■■□ 3.45
SEMA3F-205ENST00000426511 SAMD9Q5K651 1589 aa36.57■■■■□ 3.44
SEMA3F-205ENST00000426511 ARID3CA6NKF2 412 aa36.54■■■■□ 3.44
SEMA3F-205ENST00000426511 EPRSP07814 1512 aaKnown RBP36.54■■■■□ 3.44
SEMA3F-205ENST00000426511 GLI2P10070 1586 aa36.53■■■■□ 3.44
SEMA3F-205ENST00000426511 WDR7Q9Y4E6 1490 aa36.5■■■■□ 3.43
SEMA3F-205ENST00000426511 KDM6BO15054 1643 aa36.48■■■■□ 3.43
SEMA3F-205ENST00000426511 UBTFP17480 764 aaKnown RBP36.46■■■■□ 3.43
SEMA3F-205ENST00000426511 FHOD3Q2V2M9 1422 aa36.43■■■■□ 3.42
SEMA3F-205ENST00000426511 KCNH8Q96L42 1107 aa36.42■■■■□ 3.42
SEMA3F-205ENST00000426511 PPRC1Q5VV67 1664 aaKnown RBP36.4■■■■□ 3.42
SEMA3F-205ENST00000426511 MAP3K4Q9Y6R4 1608 aa36.38■■■■□ 3.41
SEMA3F-205ENST00000426511 RAPGEF6Q8TEU7 1601 aa36.37■■■■□ 3.41
SEMA3F-205ENST00000426511 ATP10BO94823 1461 aa36.34■■■■□ 3.41
SEMA3F-205ENST00000426511 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.33■■■■□ 3.41
SEMA3F-205ENST00000426511 HNRNPUL2Q1KMD3 747 aaKnown RBP36.33■■■■□ 3.41
SEMA3F-205ENST00000426511 AEBP2Q6ZN18 517 aaPredicted RBP36.32■■■■□ 3.4
SEMA3F-205ENST00000426511 EFCAB5A4FU69 1503 aa36.32■■■■□ 3.4
SEMA3F-205ENST00000426511 TEX14Q8IWB6 1497 aa36.28■■■■□ 3.4
SEMA3F-205ENST00000426511 CD109Q6YHK3 1445 aa36.24■■■■□ 3.39
SEMA3F-205ENST00000426511 NUP153P49790 1475 aaKnown RBP36.22■■■■□ 3.39
SEMA3F-205ENST00000426511 CFAP43Q8NDM7 1665 aa36.21■■■■□ 3.39
SEMA3F-205ENST00000426511 COL17A1Q9UMD9 1497 aaPredicted RBP36.13■■■■□ 3.37
SEMA3F-205ENST00000426511 MAGI3Q5TCQ9 1506 aa36.12■■■■□ 3.37
SEMA3F-205ENST00000426511 ARHGAP35Q9NRY4 1499 aa36.1■■■■□ 3.37
SEMA3F-205ENST00000426511 ATP1B4Q9UN42 357 aaPredicted RBP36.09■■■■□ 3.37
SEMA3F-205ENST00000426511 PLEKHD1A6NEE1 506 aa36.03■■■■□ 3.36
SEMA3F-205ENST00000426511 ABCA9Q8IUA7 1624 aa36.02■■■■□ 3.36
SEMA3F-205ENST00000426511 FMN1Q68DA7 1419 aa36.01■■■■□ 3.36
SEMA3F-205ENST00000426511 CDK13Q14004 1512 aaKnown RBP35.98■■■■□ 3.35
SEMA3F-205ENST00000426511 HECW1Q76N89 1606 aa35.93■■■■□ 3.34
SEMA3F-205ENST00000426511 KDM4FA0A1W2PPD8 638 aa35.86■■■■□ 3.33
SEMA3F-205ENST00000426511 ARAP3Q8WWN8 1544 aa35.81■■■■□ 3.32
SEMA3F-205ENST00000426511 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.8■■■■□ 3.32
SEMA3F-205ENST00000426511 NEO1Q92859 1461 aa35.79■■■■□ 3.32
SEMA3F-205ENST00000426511 PHLDB1Q86UU1 1377 aa35.78■■■■□ 3.32
SEMA3F-205ENST00000426511 TTC37Q6PGP7 1564 aa35.77■■■■□ 3.32
SEMA3F-205ENST00000426511 CLIP1P30622 1438 aa35.76■■■■□ 3.32
SEMA3F-205ENST00000426511 CDK11AQ9UQ88 783 aaPredicted RBP35.76■■■■□ 3.32
SEMA3F-205ENST00000426511 ADGRL1O94910 1474 aa35.73■■■■□ 3.31
SEMA3F-205ENST00000426511 RAPGEF3O95398 923 aa35.73■■■■□ 3.31
SEMA3F-205ENST00000426511 PCF11O94913 1555 aaKnown RBP35.72■■■■□ 3.31
SEMA3F-205ENST00000426511 LRRIQ1Q96JM4 1722 aa35.69■■■■□ 3.3
SEMA3F-205ENST00000426511 FANCAO15360 1455 aa35.68■■■■□ 3.3
SEMA3F-205ENST00000426511 CASKIN1Q8WXD9 1431 aa35.67■■■■□ 3.3
SEMA3F-205ENST00000426511 CFAP74Q9C0B2 1584 aa35.64■■■■□ 3.3
SEMA3F-205ENST00000426511 AKNAQ7Z591 1439 aa35.64■■■■□ 3.3
SEMA3F-205ENST00000426511 TROQ12816 1431 aaPredicted RBP35.62■■■■□ 3.29
SEMA3F-205ENST00000426511 KIF14Q15058 1648 aa35.61■■■■□ 3.29
SEMA3F-205ENST00000426511 DENND4BO75064 1496 aaPredicted RBP35.59■■■■□ 3.29
SEMA3F-205ENST00000426511 CCDC18Q5T9S5 1454 aa35.59■■■■□ 3.29
SEMA3F-205ENST00000426511 FRMPD1Q5SYB0 1578 aa35.59■■■■□ 3.29
SEMA3F-205ENST00000426511 FYCO1Q9BQS8 1478 aa35.57■■■■□ 3.28
SEMA3F-205ENST00000426511 PLCH2O75038 1416 aa35.57■■■■□ 3.28
SEMA3F-205ENST00000426511 MYO5CQ9NQX4 1742 aa35.54■■■■□ 3.28
SEMA3F-205ENST00000426511 RICTORQ6R327 1708 aa35.49■■■■□ 3.27
SEMA3F-205ENST00000426511 EFCAB2Q5VUJ9 269 aa35.48■■■■□ 3.27
SEMA3F-205ENST00000426511 CEP162Q5TB80 1403 aa35.47■■■■□ 3.27
SEMA3F-205ENST00000426511 SCAPERQ9BY12 1400 aa35.45■■■■□ 3.27
SEMA3F-205ENST00000426511 ARHGAP5Q13017 1502 aa35.45■■■■□ 3.27
SEMA3F-205ENST00000426511 ARID4BQ4LE39 1312 aaPredicted RBP35.42■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms