RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 RUSC2Q8N2Y8 1516 aa29.79■■■□□ 2.36
SLC6A1-202ENST00000425938 CARMIL1Q5VZK9 1371 aa29.78■■■□□ 2.36
SLC6A1-202ENST00000425938 PRG4Q92954 1404 aaPredicted RBP29.78■■■□□ 2.36
SLC6A1-202ENST00000425938 KIAA0586Q9BVV6 1533 aa29.7■■■□□ 2.34
SLC6A1-202ENST00000425938 RAPGEF2Q9Y4G8 1499 aa29.59■■■□□ 2.33
SLC6A1-202ENST00000425938 IQGAP2Q13576 1575 aa29.5■■■□□ 2.31
SLC6A1-202ENST00000425938 NPM1P06748 294 aaKnown RBP eCLIP29.42■■■□□ 2.3
SLC6A1-202ENST00000425938 CARMIL2Q6F5E8 1435 aa29.42■■■□□ 2.3
SLC6A1-202ENST00000425938 PRXQ9BXM0 1461 aa29.39■■■□□ 2.3
SLC6A1-202ENST00000425938 ADCY10Q96PN6 1610 aa29.38■■■□□ 2.29
SLC6A1-202ENST00000425938 PTPRGP23470 1445 aa29.37■■■□□ 2.29
SLC6A1-202ENST00000425938 CTTNBP2Q8WZ74 1663 aa29.36■■■□□ 2.29
SLC6A1-202ENST00000425938 TNIKQ9UKE5 1360 aa29.35■■■□□ 2.29
SLC6A1-202ENST00000425938 EEA1Q15075 1411 aa29.33■■■□□ 2.29
SLC6A1-202ENST00000425938 CSRNP3Q8WYN3 585 aa29.32■■■□□ 2.28
SLC6A1-202ENST00000425938 MAPKBP1O60336 1514 aa29.31■■■□□ 2.28
SLC6A1-202ENST00000425938 UGGT2Q9NYU1 1516 aa29.31■■■□□ 2.28
SLC6A1-202ENST00000425938 KIF13AQ9H1H9 1805 aa29.29■■■□□ 2.28
SLC6A1-202ENST00000425938 DISP1Q96F81 1524 aa29.28■■■□□ 2.28
SLC6A1-202ENST00000425938 TTBK1Q5TCY1 1321 aaPredicted RBP29.27■■■□□ 2.28
SLC6A1-202ENST00000425938 ABCC10Q5T3U5 1492 aa29.24■■■□□ 2.27
SLC6A1-202ENST00000425938 CHIC1Q5VXU3 224 aa29.23■■■□□ 2.27
SLC6A1-202ENST00000425938 KIAA0556O60303 1618 aa29.22■■■□□ 2.27
SLC6A1-202ENST00000425938 FAM69CQ0P6D2 419 aa29.21■■■□□ 2.27
SLC6A1-202ENST00000425938 GOLGA3Q08378 1498 aa29.17■■■□□ 2.26
SLC6A1-202ENST00000425938 FAM9AQ8IZU1 332 aaPredicted RBP29.17■■■□□ 2.26
SLC6A1-202ENST00000425938 ABCC2Q92887 1545 aa29.16■■■□□ 2.26
SLC6A1-202ENST00000425938 DIP2BQ9P265 1576 aa29.16■■■□□ 2.26
SLC6A1-202ENST00000425938 UHRF1BP1LA0JNW5 1464 aa29.16■■■□□ 2.26
SLC6A1-202ENST00000425938 UACAQ9BZF9 1416 aa29.15■■■□□ 2.26
SLC6A1-202ENST00000425938 KIF21BO75037 1637 aa29.04■■■□□ 2.24
SLC6A1-202ENST00000425938 PLB1Q6P1J6 1458 aa29.03■■■□□ 2.24
SLC6A1-202ENST00000425938 ASXL2Q76L83 1435 aa29.03■■■□□ 2.24
SLC6A1-202ENST00000425938 KDM5BQ9UGL1 1544 aa29.01■■■□□ 2.23
SLC6A1-202ENST00000425938 ZCCHC11Q5TAX3 1644 aaKnown RBP28.93■■■□□ 2.22
SLC6A1-202ENST00000425938 TSPOAP1O95153 1857 aa28.93■■■□□ 2.22
SLC6A1-202ENST00000425938 GLI2P10070 1586 aa28.92■■■□□ 2.22
SLC6A1-202ENST00000425938 SAMD9Q5K651 1589 aa28.92■■■□□ 2.22
SLC6A1-202ENST00000425938 P3H3Q8IVL6 736 aa28.91■■■□□ 2.22
SLC6A1-202ENST00000425938 ABCA8O94911 1581 aa28.9■■■□□ 2.22
SLC6A1-202ENST00000425938 RANGAP1P46060 587 aaPredicted RBP28.86■■■□□ 2.21
SLC6A1-202ENST00000425938 EPRSP07814 1512 aaKnown RBP28.85■■■□□ 2.21
SLC6A1-202ENST00000425938 KDM6BO15054 1643 aa28.83■■■□□ 2.21
SLC6A1-202ENST00000425938 UBTFP17480 764 aaKnown RBP28.82■■■□□ 2.2
SLC6A1-202ENST00000425938 EHMT2Q96KQ7 1210 aa28.81■■■□□ 2.2
SLC6A1-202ENST00000425938 WDR7Q9Y4E6 1490 aa28.79■■■□□ 2.2
SLC6A1-202ENST00000425938 AEBP2Q6ZN18 517 aaPredicted RBP28.78■■■□□ 2.2
SLC6A1-202ENST00000425938 EFCAB5A4FU69 1503 aa28.78■■■□□ 2.2
SLC6A1-202ENST00000425938 PPRC1Q5VV67 1664 aaKnown RBP28.77■■■□□ 2.2
SLC6A1-202ENST00000425938 MAP3K4Q9Y6R4 1608 aa28.76■■■□□ 2.19
SLC6A1-202ENST00000425938 FHOD3Q2V2M9 1422 aa28.74■■■□□ 2.19
SLC6A1-202ENST00000425938 RAPGEF6Q8TEU7 1601 aa28.72■■■□□ 2.19
SLC6A1-202ENST00000425938 TEX14Q8IWB6 1497 aa28.69■■■□□ 2.18
SLC6A1-202ENST00000425938 ARID3CA6NKF2 412 aa28.67■■■□□ 2.18
SLC6A1-202ENST00000425938 KCNH8Q96L42 1107 aa28.66■■■□□ 2.18
SLC6A1-202ENST00000425938 ATP10BO94823 1461 aa28.66■■■□□ 2.18
SLC6A1-202ENST00000425938 CFAP43Q8NDM7 1665 aa28.61■■■□□ 2.17
SLC6A1-202ENST00000425938 CD109Q6YHK3 1445 aa28.6■■■□□ 2.17
SLC6A1-202ENST00000425938 NUP153P49790 1475 aaKnown RBP28.59■■■□□ 2.17
SLC6A1-202ENST00000425938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.58■■■□□ 2.17
SLC6A1-202ENST00000425938 HNRNPUL2Q1KMD3 747 aaKnown RBP28.58■■■□□ 2.17
SLC6A1-202ENST00000425938 MAGI3Q5TCQ9 1506 aa28.57■■■□□ 2.16
SLC6A1-202ENST00000425938 COL17A1Q9UMD9 1497 aaPredicted RBP28.56■■■□□ 2.16
SLC6A1-202ENST00000425938 ARHGAP35Q9NRY4 1499 aa28.54■■■□□ 2.16
SLC6A1-202ENST00000425938 FMN1Q68DA7 1419 aa28.52■■■□□ 2.16
SLC6A1-202ENST00000425938 ABCA9Q8IUA7 1624 aa28.44■■■□□ 2.14
SLC6A1-202ENST00000425938 PLEKHD1A6NEE1 506 aa28.43■■■□□ 2.14
SLC6A1-202ENST00000425938 HECW1Q76N89 1606 aa28.41■■■□□ 2.14
SLC6A1-202ENST00000425938 KDM4FA0A1W2PPD8 638 aa28.41■■■□□ 2.14
SLC6A1-202ENST00000425938 ATP1B4Q9UN42 357 aaPredicted RBP28.4■■■□□ 2.14
SLC6A1-202ENST00000425938 CDK13Q14004 1512 aaKnown RBP28.36■■■□□ 2.13
SLC6A1-202ENST00000425938 PHLDB1Q86UU1 1377 aa28.35■■■□□ 2.13
SLC6A1-202ENST00000425938 ARAP3Q8WWN8 1544 aa28.34■■■□□ 2.13
SLC6A1-202ENST00000425938 CLIP1P30622 1438 aa28.31■■■□□ 2.12
SLC6A1-202ENST00000425938 NEO1Q92859 1461 aa28.28■■■□□ 2.12
SLC6A1-202ENST00000425938 CDK11AQ9UQ88 783 aaPredicted RBP28.28■■■□□ 2.12
SLC6A1-202ENST00000425938 ADGRL1O94910 1474 aa28.26■■■□□ 2.11
SLC6A1-202ENST00000425938 CASKIN1Q8WXD9 1431 aa28.24■■■□□ 2.11
SLC6A1-202ENST00000425938 PCF11O94913 1555 aaKnown RBP28.24■■■□□ 2.11
SLC6A1-202ENST00000425938 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.23■■■□□ 2.11
SLC6A1-202ENST00000425938 LRRIQ1Q96JM4 1722 aa28.21■■■□□ 2.11
SLC6A1-202ENST00000425938 TTC37Q6PGP7 1564 aa28.2■■■□□ 2.1
SLC6A1-202ENST00000425938 CCDC18Q5T9S5 1454 aa28.18■■■□□ 2.1
SLC6A1-202ENST00000425938 FYCO1Q9BQS8 1478 aa28.17■■■□□ 2.1
SLC6A1-202ENST00000425938 RAPGEF3O95398 923 aa28.16■■■□□ 2.1
SLC6A1-202ENST00000425938 CFAP74Q9C0B2 1584 aa28.16■■■□□ 2.1
SLC6A1-202ENST00000425938 TROQ12816 1431 aaPredicted RBP28.15■■■□□ 2.1
SLC6A1-202ENST00000425938 KIF14Q15058 1648 aa28.13■■■□□ 2.09
SLC6A1-202ENST00000425938 FANCAO15360 1455 aa28.13■■■□□ 2.09
SLC6A1-202ENST00000425938 CEP162Q5TB80 1403 aa28.12■■■□□ 2.09
SLC6A1-202ENST00000425938 AKNAQ7Z591 1439 aa28.11■■■□□ 2.09
SLC6A1-202ENST00000425938 MYO5CQ9NQX4 1742 aa28.09■■■□□ 2.09
SLC6A1-202ENST00000425938 FRMPD1Q5SYB0 1578 aa28.08■■■□□ 2.09
SLC6A1-202ENST00000425938 DENND4BO75064 1496 aaPredicted RBP28.08■■■□□ 2.09
SLC6A1-202ENST00000425938 PLCH2O75038 1416 aa28.07■■■□□ 2.08
SLC6A1-202ENST00000425938 LOC105371045A0A1W2PR82 267 aa28.03■■■□□ 2.08
SLC6A1-202ENST00000425938 RICTORQ6R327 1708 aa28.01■■■□□ 2.07
SLC6A1-202ENST00000425938 EFCAB2Q5VUJ9 269 aa27.99■■■□□ 2.07
SLC6A1-202ENST00000425938 ARHGAP5Q13017 1502 aa27.96■■■□□ 2.07
SLC6A1-202ENST00000425938 SCAPERQ9BY12 1400 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms