RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 ADAMTS12P58397 1594 aa22.48■■□□□ 1.19
CDK3-201ENST00000425876 CTTNBP2Q8WZ74 1663 aa22.46■■□□□ 1.19
CDK3-201ENST00000425876 EFCAB5A4FU69 1503 aa22.41■■□□□ 1.18
CDK3-201ENST00000425876 MAGI1Q96QZ7 1491 aaPredicted RBP22.37■■□□□ 1.17
CDK3-201ENST00000425876 SNAPC4Q5SXM2 1469 aa22.36■■□□□ 1.17
CDK3-201ENST00000425876 PPARGC1BQ86YN6 1023 aaKnown RBP22.36■■□□□ 1.17
CDK3-201ENST00000425876 APLP2Q06481 763 aa22.35■■□□□ 1.17
CDK3-201ENST00000425876 CHD1O14646 1710 aa22.34■■□□□ 1.17
CDK3-201ENST00000425876 SAMD9Q5K651 1589 aa22.28■■□□□ 1.16
CDK3-201ENST00000425876 GRIN2AQ12879 1464 aa22.28■■□□□ 1.16
CDK3-201ENST00000425876 SYNJ2O15056 1496 aa22.27■■□□□ 1.16
CDK3-201ENST00000425876 IQGAP2Q13576 1575 aa22.25■■□□□ 1.15
CDK3-201ENST00000425876 MAP3K1Q13233 1512 aa22.24■■□□□ 1.15
CDK3-201ENST00000425876 OSCARQ8IYS5 282 aa22.24■■□□□ 1.15
CDK3-201ENST00000425876 KIAA0586Q9BVV6 1533 aa22.23■■□□□ 1.15
CDK3-201ENST00000425876 FHOD3Q2V2M9 1422 aa22.22■■□□□ 1.15
CDK3-201ENST00000425876 FBLN2P98095 1184 aa22.22■■□□□ 1.15
CDK3-201ENST00000425876 FMN1Q68DA7 1419 aa22.21■■□□□ 1.15
CDK3-201ENST00000425876 CHMP7Q8WUX9 453 aaPredicted RBP22.19■■□□□ 1.14
CDK3-201ENST00000425876 UGGT2Q9NYU1 1516 aa22.19■■□□□ 1.14
CDK3-201ENST00000425876 P3H3Q8IVL6 736 aa22.18■■□□□ 1.14
CDK3-201ENST00000425876 CASKIN1Q8WXD9 1431 aa22.17■■□□□ 1.14
CDK3-201ENST00000425876 FYCO1Q9BQS8 1478 aa22.17■■□□□ 1.14
CDK3-201ENST00000425876 TTBK1Q5TCY1 1321 aaPredicted RBP22.15■■□□□ 1.14
CDK3-201ENST00000425876 PCF11O94913 1555 aaKnown RBP22.14■■□□□ 1.13
CDK3-201ENST00000425876 NUP160Q12769 1436 aa22.13■■□□□ 1.13
CDK3-201ENST00000425876 TIAM1Q13009 1591 aa22.12■■□□□ 1.13
CDK3-201ENST00000425876 CEP170Q5SW79 1584 aa22.1■■□□□ 1.13
CDK3-201ENST00000425876 KANK4Q5T7N3 995 aaPredicted RBP22.1■■□□□ 1.13
CDK3-201ENST00000425876 CLASP1Q7Z460 1538 aa22.07■■□□□ 1.12
CDK3-201ENST00000425876 CFAP43Q8NDM7 1665 aa22.06■■□□□ 1.12
CDK3-201ENST00000425876 HRCP23327 699 aa22.05■■□□□ 1.12
CDK3-201ENST00000425876 LRRC9Q6ZRR7 1453 aa22.04■■□□□ 1.12
CDK3-201ENST00000425876 DISP1Q96F81 1524 aa22.03■■□□□ 1.12
CDK3-201ENST00000425876 KIAA0556O60303 1618 aa22.01■■□□□ 1.11
CDK3-201ENST00000425876 RIMBP3CA6NJZ7 1639 aa22■■□□□ 1.11
CDK3-201ENST00000425876 RIMBP3BA6NNM3 1639 aa22■■□□□ 1.11
CDK3-201ENST00000425876 RIMBP3Q9UFD9 1639 aa22■■□□□ 1.11
CDK3-201ENST00000425876 ARHGEF11O15085 1522 aa21.98■■□□□ 1.11
CDK3-201ENST00000425876 JPH4Q96JJ6 628 aa21.95■■□□□ 1.11
CDK3-201ENST00000425876 ATP1B4Q9UN42 357 aaPredicted RBP21.95■■□□□ 1.11
CDK3-201ENST00000425876 RRBP1Q9P2E9 1410 aaKnown RBP21.95■■□□□ 1.11
CDK3-201ENST00000425876 CARMIL2Q6F5E8 1435 aa21.94■■□□□ 1.1
CDK3-201ENST00000425876 CCDC18Q5T9S5 1454 aa21.93■■□□□ 1.1
CDK3-201ENST00000425876 HECW1Q76N89 1606 aa21.93■■□□□ 1.1
CDK3-201ENST00000425876 LRRIQ1Q96JM4 1722 aa21.88■■□□□ 1.09
CDK3-201ENST00000425876 CCNB3Q8WWL7 1395 aa21.85■■□□□ 1.09
CDK3-201ENST00000425876 SHROOM2Q13796 1616 aa21.85■■□□□ 1.09
CDK3-201ENST00000425876 EPRSP07814 1512 aaKnown RBP21.85■■□□□ 1.09
CDK3-201ENST00000425876 MTUS2Q5JR59 1369 aa21.84■■□□□ 1.09
CDK3-201ENST00000425876 EHBP1L1Q8N3D4 1523 aa21.82■■□□□ 1.08
CDK3-201ENST00000425876 ZEB1P37275 1124 aaPredicted RBP21.82■■□□□ 1.08
CDK3-201ENST00000425876 ERCC6L2Q5T890 1561 aa21.82■■□□□ 1.08
CDK3-201ENST00000425876 PHLDB1Q86UU1 1377 aa21.81■■□□□ 1.08
CDK3-201ENST00000425876 RAPGEF6Q8TEU7 1601 aa21.81■■□□□ 1.08
CDK3-201ENST00000425876 PRG4Q92954 1404 aaPredicted RBP21.78■■□□□ 1.08
CDK3-201ENST00000425876 NUP153P49790 1475 aaKnown RBP21.78■■□□□ 1.08
CDK3-201ENST00000425876 HNRNPUL2Q1KMD3 747 aaKnown RBP21.77■■□□□ 1.08
CDK3-201ENST00000425876 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.75■■□□□ 1.07
CDK3-201ENST00000425876 SUPT6HQ7KZ85 1726 aaKnown RBP21.74■■□□□ 1.07
CDK3-201ENST00000425876 CDK13Q14004 1512 aaKnown RBP21.73■■□□□ 1.07
CDK3-201ENST00000425876 MAGI3Q5TCQ9 1506 aa21.73■■□□□ 1.07
CDK3-201ENST00000425876 NCOA2Q15596 1464 aa21.73■■□□□ 1.07
CDK3-201ENST00000425876 PLB1Q6P1J6 1458 aa21.71■■□□□ 1.07
CDK3-201ENST00000425876 CYB5RLQ6IPT4 315 aa21.71■■□□□ 1.07
CDK3-201ENST00000425876 ABCA8O94911 1581 aa21.71■■□□□ 1.07
CDK3-201ENST00000425876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.69■■□□□ 1.06
CDK3-201ENST00000425876 CDK11AQ9UQ88 783 aaPredicted RBP21.69■■□□□ 1.06
CDK3-201ENST00000425876 PTPRGP23470 1445 aa21.69■■□□□ 1.06
CDK3-201ENST00000425876 FGD6Q6ZV73 1430 aa21.68■■□□□ 1.06
CDK3-201ENST00000425876 MYOM3Q5VTT5 1437 aa21.67■■□□□ 1.06
CDK3-201ENST00000425876 CCER1Q8TC90 406 aaPredicted RBP21.66■■□□□ 1.06
CDK3-201ENST00000425876 TROQ12816 1431 aaPredicted RBP21.6■■□□□ 1.05
CDK3-201ENST00000425876 FAM50AQ14320 339 aaKnown RBP21.6■■□□□ 1.05
CDK3-201ENST00000425876 ARID3CA6NKF2 412 aa21.58■■□□□ 1.05
CDK3-201ENST00000425876 MIA2Q96PC5 1412 aa21.58■■□□□ 1.04
CDK3-201ENST00000425876 UACAQ9BZF9 1416 aa21.57■■□□□ 1.04
CDK3-201ENST00000425876 ATP10BO94823 1461 aa21.57■■□□□ 1.04
CDK3-201ENST00000425876 TCOF1Q13428 1488 aaKnown RBP21.55■■□□□ 1.04
CDK3-201ENST00000425876 ADCY10Q96PN6 1610 aa21.53■■□□□ 1.04
CDK3-201ENST00000425876 PTPN23Q9H3S7 1636 aa21.53■■□□□ 1.04
CDK3-201ENST00000425876 ITGAEP38570 1179 aa21.52■■□□□ 1.04
CDK3-201ENST00000425876 PLEKHD1A6NEE1 506 aa21.5■■□□□ 1.03
CDK3-201ENST00000425876 ABCC2Q92887 1545 aa21.5■■□□□ 1.03
CDK3-201ENST00000425876 SETD5Q9C0A6 1442 aa21.48■■□□□ 1.03
CDK3-201ENST00000425876 UHRF1BP1LA0JNW5 1464 aa21.48■■□□□ 1.03
CDK3-201ENST00000425876 CLSPNQ9HAW4 1339 aa21.46■■□□□ 1.03
CDK3-201ENST00000425876 RAB3GAP2Q9H2M9 1393 aa21.43■■□□□ 1.02
CDK3-201ENST00000425876 KIF14Q15058 1648 aa21.42■■□□□ 1.02
CDK3-201ENST00000425876 ITSN2Q9NZM3 1697 aa21.42■■□□□ 1.02
CDK3-201ENST00000425876 DHX57Q6P158 1386 aaKnown RBP21.42■■□□□ 1.02
CDK3-201ENST00000425876 GPATCH8Q9UKJ3 1502 aaKnown RBP21.41■■□□□ 1.02
CDK3-201ENST00000425876 ABCC10Q5T3U5 1492 aa21.41■■□□□ 1.02
CDK3-201ENST00000425876 PTPRKQ15262 1439 aa21.4■■□□□ 1.02
CDK3-201ENST00000425876 HFM1A2PYH4 1435 aa21.38■■□□□ 1.01
CDK3-201ENST00000425876 KDM5BQ9UGL1 1544 aa21.37■■□□□ 1.01
CDK3-201ENST00000425876 AKNAQ7Z591 1439 aa21.36■■□□□ 1.01
CDK3-201ENST00000425876 CFDP1Q9UEE9 299 aaPredicted RBP21.34■■□□□ 1.01
CDK3-201ENST00000425876 DNMT1P26358 1616 aaKnown RBP21.31■■□□□ 1
CDK3-201ENST00000425876 NAIPQ13075 1403 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms