RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 KIAA0586Q9BVV6 1533 aa31.4■■■□□ 2.62
MSH5-207ENST00000425703 ERCC6L2Q5T890 1561 aa31.39■■■□□ 2.61
MSH5-207ENST00000425703 PRG4Q92954 1404 aaPredicted RBP31.36■■■□□ 2.61
MSH5-207ENST00000425703 RAPGEF2Q9Y4G8 1499 aa31.28■■■□□ 2.6
MSH5-207ENST00000425703 PRXQ9BXM0 1461 aa31.14■■■□□ 2.57
MSH5-207ENST00000425703 IQGAP2Q13576 1575 aa31.13■■■□□ 2.57
MSH5-207ENST00000425703 TRHP20396 242 aaPredicted RBP31.09■■■□□ 2.57
MSH5-207ENST00000425703 CARMIL2Q6F5E8 1435 aa31.07■■■□□ 2.57
MSH5-207ENST00000425703 EEA1Q15075 1411 aa31.07■■■□□ 2.56
MSH5-207ENST00000425703 CSRNP3Q8WYN3 585 aa31.03■■■□□ 2.56
MSH5-207ENST00000425703 UGGT2Q9NYU1 1516 aa31■■■□□ 2.55
MSH5-207ENST00000425703 TNIKQ9UKE5 1360 aa30.99■■■□□ 2.55
MSH5-207ENST00000425703 PTPRGP23470 1445 aa30.98■■■□□ 2.55
MSH5-207ENST00000425703 CHIC1Q5VXU3 224 aa30.97■■■□□ 2.55
MSH5-207ENST00000425703 DISP1Q96F81 1524 aa30.95■■■□□ 2.55
MSH5-207ENST00000425703 NPM1P06748 294 aaKnown RBP eCLIP30.89■■■□□ 2.54
MSH5-207ENST00000425703 CTTNBP2Q8WZ74 1663 aa30.89■■■□□ 2.54
MSH5-207ENST00000425703 ADCY10Q96PN6 1610 aa30.87■■■□□ 2.53
MSH5-207ENST00000425703 KIAA0556O60303 1618 aa30.83■■■□□ 2.53
MSH5-207ENST00000425703 GOLGA3Q08378 1498 aa30.82■■■□□ 2.53
MSH5-207ENST00000425703 MAPKBP1O60336 1514 aa30.8■■■□□ 2.52
MSH5-207ENST00000425703 UHRF1BP1LA0JNW5 1464 aa30.78■■■□□ 2.52
MSH5-207ENST00000425703 TTBK1Q5TCY1 1321 aaPredicted RBP30.77■■■□□ 2.52
MSH5-207ENST00000425703 UACAQ9BZF9 1416 aa30.76■■■□□ 2.51
MSH5-207ENST00000425703 FAM9AQ8IZU1 332 aaPredicted RBP30.75■■■□□ 2.51
MSH5-207ENST00000425703 ABCC2Q92887 1545 aa30.74■■■□□ 2.51
MSH5-207ENST00000425703 ABCC10Q5T3U5 1492 aa30.7■■■□□ 2.5
MSH5-207ENST00000425703 KIF21BO75037 1637 aa30.69■■■□□ 2.5
MSH5-207ENST00000425703 KDM5BQ9UGL1 1544 aa30.62■■■□□ 2.49
MSH5-207ENST00000425703 FAM69CQ0P6D2 419 aa30.61■■■□□ 2.49
MSH5-207ENST00000425703 KIF13AQ9H1H9 1805 aa30.6■■■□□ 2.49
MSH5-207ENST00000425703 DIP2BQ9P265 1576 aa30.58■■■□□ 2.49
MSH5-207ENST00000425703 PLB1Q6P1J6 1458 aa30.57■■■□□ 2.48
MSH5-207ENST00000425703 SAMD9Q5K651 1589 aa30.56■■■□□ 2.48
MSH5-207ENST00000425703 ASXL2Q76L83 1435 aa30.55■■■□□ 2.48
MSH5-207ENST00000425703 ABCA8O94911 1581 aa30.54■■■□□ 2.48
MSH5-207ENST00000425703 P3H3Q8IVL6 736 aa30.48■■■□□ 2.47
MSH5-207ENST00000425703 ZCCHC11Q5TAX3 1644 aaKnown RBP30.46■■■□□ 2.47
MSH5-207ENST00000425703 UBTFP17480 764 aaKnown RBP30.43■■■□□ 2.46
MSH5-207ENST00000425703 GLI2P10070 1586 aa30.42■■■□□ 2.46
MSH5-207ENST00000425703 EFCAB5A4FU69 1503 aa30.42■■■□□ 2.46
MSH5-207ENST00000425703 RANGAP1P46060 587 aaPredicted RBP30.37■■■□□ 2.45
MSH5-207ENST00000425703 WDR7Q9Y4E6 1490 aa30.37■■■□□ 2.45
MSH5-207ENST00000425703 EPRSP07814 1512 aaKnown RBP30.37■■■□□ 2.45
MSH5-207ENST00000425703 FHOD3Q2V2M9 1422 aa30.35■■■□□ 2.45
MSH5-207ENST00000425703 EHMT2Q96KQ7 1210 aa30.3■■■□□ 2.44
MSH5-207ENST00000425703 RAPGEF6Q8TEU7 1601 aa30.29■■■□□ 2.44
MSH5-207ENST00000425703 ATP10BO94823 1461 aa30.29■■■□□ 2.44
MSH5-207ENST00000425703 NUP153P49790 1475 aaKnown RBP30.22■■■□□ 2.43
MSH5-207ENST00000425703 MAP3K4Q9Y6R4 1608 aa30.22■■■□□ 2.43
MSH5-207ENST00000425703 TSPOAP1O95153 1857 aa30.2■■■□□ 2.42
MSH5-207ENST00000425703 ARHGAP35Q9NRY4 1499 aa30.19■■■□□ 2.42
MSH5-207ENST00000425703 ARID3CA6NKF2 412 aa30.18■■■□□ 2.42
MSH5-207ENST00000425703 PPRC1Q5VV67 1664 aaKnown RBP30.17■■■□□ 2.42
MSH5-207ENST00000425703 FMN1Q68DA7 1419 aa30.16■■■□□ 2.42
MSH5-207ENST00000425703 KCNH8Q96L42 1107 aa30.16■■■□□ 2.42
MSH5-207ENST00000425703 TEX14Q8IWB6 1497 aa30.16■■■□□ 2.42
MSH5-207ENST00000425703 KDM6BO15054 1643 aa30.14■■■□□ 2.41
MSH5-207ENST00000425703 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.11■■■□□ 2.41
MSH5-207ENST00000425703 HNRNPUL2Q1KMD3 747 aaKnown RBP30.11■■■□□ 2.41
MSH5-207ENST00000425703 CD109Q6YHK3 1445 aa30.11■■■□□ 2.41
MSH5-207ENST00000425703 MAGI3Q5TCQ9 1506 aa30.09■■■□□ 2.41
MSH5-207ENST00000425703 CFAP43Q8NDM7 1665 aa30.09■■■□□ 2.41
MSH5-207ENST00000425703 PLEKHD1A6NEE1 506 aa30.03■■■□□ 2.4
MSH5-207ENST00000425703 ABCA9Q8IUA7 1624 aa30■■■□□ 2.39
MSH5-207ENST00000425703 HECW1Q76N89 1606 aa29.98■■■□□ 2.39
MSH5-207ENST00000425703 COL17A1Q9UMD9 1497 aaPredicted RBP29.96■■■□□ 2.39
MSH5-207ENST00000425703 CLIP1P30622 1438 aa29.95■■■□□ 2.38
MSH5-207ENST00000425703 CDK13Q14004 1512 aaKnown RBP29.92■■■□□ 2.38
MSH5-207ENST00000425703 PHLDB1Q86UU1 1377 aa29.91■■■□□ 2.38
MSH5-207ENST00000425703 ATP1B4Q9UN42 357 aaPredicted RBP29.9■■■□□ 2.38
MSH5-207ENST00000425703 CDK11AQ9UQ88 783 aaPredicted RBP29.89■■■□□ 2.38
MSH5-207ENST00000425703 CASKIN1Q8WXD9 1431 aa29.88■■■□□ 2.37
MSH5-207ENST00000425703 ARAP3Q8WWN8 1544 aa29.84■■■□□ 2.37
MSH5-207ENST00000425703 NEO1Q92859 1461 aa29.83■■■□□ 2.37
MSH5-207ENST00000425703 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.81■■■□□ 2.36
MSH5-207ENST00000425703 CCDC18Q5T9S5 1454 aa29.8■■■□□ 2.36
MSH5-207ENST00000425703 FYCO1Q9BQS8 1478 aa29.79■■■□□ 2.36
MSH5-207ENST00000425703 PCF11O94913 1555 aaKnown RBP29.78■■■□□ 2.36
MSH5-207ENST00000425703 TROQ12816 1431 aaPredicted RBP29.76■■■□□ 2.35
MSH5-207ENST00000425703 CEP162Q5TB80 1403 aa29.74■■■□□ 2.35
MSH5-207ENST00000425703 TTC37Q6PGP7 1564 aa29.73■■■□□ 2.35
MSH5-207ENST00000425703 AEBP2Q6ZN18 517 aaPredicted RBP29.72■■■□□ 2.35
MSH5-207ENST00000425703 LRRIQ1Q96JM4 1722 aa29.71■■■□□ 2.35
MSH5-207ENST00000425703 FANCAO15360 1455 aa29.69■■■□□ 2.34
MSH5-207ENST00000425703 PLCH2O75038 1416 aa29.69■■■□□ 2.34
MSH5-207ENST00000425703 KIF14Q15058 1648 aa29.67■■■□□ 2.34
MSH5-207ENST00000425703 CFAP74Q9C0B2 1584 aa29.66■■■□□ 2.34
MSH5-207ENST00000425703 AKNAQ7Z591 1439 aa29.66■■■□□ 2.34
MSH5-207ENST00000425703 LOC105371045A0A1W2PR82 267 aa29.64■■■□□ 2.34
MSH5-207ENST00000425703 RAPGEF3O95398 923 aa29.62■■■□□ 2.33
MSH5-207ENST00000425703 KDM4FA0A1W2PPD8 638 aa29.6■■■□□ 2.33
MSH5-207ENST00000425703 DENND4BO75064 1496 aaPredicted RBP29.6■■■□□ 2.33
MSH5-207ENST00000425703 EFCAB2Q5VUJ9 269 aa29.58■■■□□ 2.33
MSH5-207ENST00000425703 FRMPD1Q5SYB0 1578 aa29.55■■■□□ 2.32
MSH5-207ENST00000425703 MYO5CQ9NQX4 1742 aa29.54■■■□□ 2.32
MSH5-207ENST00000425703 ADGRL1O94910 1474 aa29.52■■■□□ 2.32
MSH5-207ENST00000425703 SCAPERQ9BY12 1400 aa29.49■■■□□ 2.31
MSH5-207ENST00000425703 RICTORQ6R327 1708 aa29.48■■■□□ 2.31
MSH5-207ENST00000425703 ARHGAP5Q13017 1502 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms