RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 KIF13AQ9H1H9 1805 aa26.5■■□□□ 1.83
ATG4B-209ENST00000425239 KIAA0586Q9BVV6 1533 aa26.45■■□□□ 1.83
ATG4B-209ENST00000425239 KIF27Q86VH2 1401 aa26.44■■□□□ 1.82
ATG4B-209ENST00000425239 CUL7Q14999 1698 aa26.38■■□□□ 1.81
ATG4B-209ENST00000425239 ABCC10Q5T3U5 1492 aa26.37■■□□□ 1.81
ATG4B-209ENST00000425239 ADCY10Q96PN6 1610 aa26.37■■□□□ 1.81
ATG4B-209ENST00000425239 AEBP2Q6ZN18 517 aaPredicted RBP26.36■■□□□ 1.81
ATG4B-209ENST00000425239 MAPKBP1O60336 1514 aa26.35■■□□□ 1.81
ATG4B-209ENST00000425239 FAM69CQ0P6D2 419 aa26.32■■□□□ 1.8
ATG4B-209ENST00000425239 CARMIL1Q5VZK9 1371 aa26.31■■□□□ 1.8
ATG4B-209ENST00000425239 NPM1P06748 294 aaKnown RBP eCLIP26.29■■□□□ 1.8
ATG4B-209ENST00000425239 DIP2BQ9P265 1576 aa26.27■■□□□ 1.8
ATG4B-209ENST00000425239 PTPRGP23470 1445 aa26.2■■□□□ 1.78
ATG4B-209ENST00000425239 TNIKQ9UKE5 1360 aa26.15■■□□□ 1.78
ATG4B-209ENST00000425239 IQGAP2Q13576 1575 aa26.12■■□□□ 1.77
ATG4B-209ENST00000425239 CARMIL2Q6F5E8 1435 aa26.11■■□□□ 1.77
ATG4B-209ENST00000425239 DISP1Q96F81 1524 aa26.1■■□□□ 1.77
ATG4B-209ENST00000425239 ABCC2Q92887 1545 aa26.09■■□□□ 1.77
ATG4B-209ENST00000425239 UHRF1BP1LA0JNW5 1464 aa26.06■■□□□ 1.76
ATG4B-209ENST00000425239 TTBK1Q5TCY1 1321 aaPredicted RBP26.06■■□□□ 1.76
ATG4B-209ENST00000425239 TSPOAP1O95153 1857 aa26.04■■□□□ 1.76
ATG4B-209ENST00000425239 RAPGEF2Q9Y4G8 1499 aa26.04■■□□□ 1.76
ATG4B-209ENST00000425239 KDM6BO15054 1643 aa26.01■■□□□ 1.75
ATG4B-209ENST00000425239 ASXL2Q76L83 1435 aa26.01■■□□□ 1.75
ATG4B-209ENST00000425239 UACAQ9BZF9 1416 aa26.01■■□□□ 1.75
ATG4B-209ENST00000425239 UGGT2Q9NYU1 1516 aa26.01■■□□□ 1.75
ATG4B-209ENST00000425239 GLI2P10070 1586 aa25.99■■□□□ 1.75
ATG4B-209ENST00000425239 PLB1Q6P1J6 1458 aa25.98■■□□□ 1.75
ATG4B-209ENST00000425239 KDM4FA0A1W2PPD8 638 aa25.97■■□□□ 1.75
ATG4B-209ENST00000425239 PPRC1Q5VV67 1664 aaKnown RBP25.96■■□□□ 1.75
ATG4B-209ENST00000425239 KDM5BQ9UGL1 1544 aa25.95■■□□□ 1.74
ATG4B-209ENST00000425239 KIAA0556O60303 1618 aa25.91■■□□□ 1.74
ATG4B-209ENST00000425239 EPRSP07814 1512 aaKnown RBP25.88■■□□□ 1.73
ATG4B-209ENST00000425239 COL17A1Q9UMD9 1497 aaPredicted RBP25.85■■□□□ 1.73
ATG4B-209ENST00000425239 ZCCHC11Q5TAX3 1644 aaKnown RBP25.84■■□□□ 1.73
ATG4B-209ENST00000425239 MAP3K4Q9Y6R4 1608 aa25.82■■□□□ 1.72
ATG4B-209ENST00000425239 PRXQ9BXM0 1461 aa25.8■■□□□ 1.72
ATG4B-209ENST00000425239 CTTNBP2Q8WZ74 1663 aa25.79■■□□□ 1.72
ATG4B-209ENST00000425239 ABCA8O94911 1581 aa25.72■■□□□ 1.71
ATG4B-209ENST00000425239 WDR7Q9Y4E6 1490 aa25.72■■□□□ 1.71
ATG4B-209ENST00000425239 GOLGA3Q08378 1498 aa25.71■■□□□ 1.71
ATG4B-209ENST00000425239 TEX14Q8IWB6 1497 aa25.67■■□□□ 1.7
ATG4B-209ENST00000425239 ADGRL1O94910 1474 aa25.61■■□□□ 1.69
ATG4B-209ENST00000425239 MAGI3Q5TCQ9 1506 aa25.6■■□□□ 1.69
ATG4B-209ENST00000425239 CD109Q6YHK3 1445 aa25.59■■□□□ 1.69
ATG4B-209ENST00000425239 KCNH8Q96L42 1107 aa25.58■■□□□ 1.69
ATG4B-209ENST00000425239 CFAP43Q8NDM7 1665 aa25.57■■□□□ 1.68
ATG4B-209ENST00000425239 CSRNP3Q8WYN3 585 aa25.54■■□□□ 1.68
ATG4B-209ENST00000425239 ATP10BO94823 1461 aa25.53■■□□□ 1.68
ATG4B-209ENST00000425239 P3H3Q8IVL6 736 aa25.52■■□□□ 1.68
ATG4B-209ENST00000425239 SAMD9Q5K651 1589 aa25.48■■□□□ 1.67
ATG4B-209ENST00000425239 ARID3CA6NKF2 412 aa25.43■■□□□ 1.66
ATG4B-209ENST00000425239 ARAP3Q8WWN8 1544 aa25.42■■□□□ 1.66
ATG4B-209ENST00000425239 ABCA9Q8IUA7 1624 aa25.38■■□□□ 1.65
ATG4B-209ENST00000425239 RAPGEF6Q8TEU7 1601 aa25.36■■□□□ 1.65
ATG4B-209ENST00000425239 FAM9AQ8IZU1 332 aaPredicted RBP25.35■■□□□ 1.65
ATG4B-209ENST00000425239 NUP153P49790 1475 aaKnown RBP25.34■■□□□ 1.65
ATG4B-209ENST00000425239 EEA1Q15075 1411 aa25.33■■□□□ 1.65
ATG4B-209ENST00000425239 PHLDB1Q86UU1 1377 aa25.31■■□□□ 1.64
ATG4B-209ENST00000425239 HECW2Q9P2P5 1572 aa25.3■■□□□ 1.64
ATG4B-209ENST00000425239 KIF21BO75037 1637 aa25.29■■□□□ 1.64
ATG4B-209ENST00000425239 FHOD3Q2V2M9 1422 aa25.27■■□□□ 1.64
ATG4B-209ENST00000425239 RAPGEF3O95398 923 aa25.26■■□□□ 1.63
ATG4B-209ENST00000425239 NEO1Q92859 1461 aa25.26■■□□□ 1.63
ATG4B-209ENST00000425239 ILDR1Q86SU0 546 aaPredicted RBP25.24■■□□□ 1.63
ATG4B-209ENST00000425239 RANGAP1P46060 587 aaPredicted RBP25.22■■□□□ 1.63
ATG4B-209ENST00000425239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.21■■□□□ 1.63
ATG4B-209ENST00000425239 HNRNPUL2Q1KMD3 747 aaKnown RBP25.21■■□□□ 1.63
ATG4B-209ENST00000425239 FRMPD1Q5SYB0 1578 aa25.2■■□□□ 1.62
ATG4B-209ENST00000425239 ADAMTSL3P82987 1691 aa25.17■■□□□ 1.62
ATG4B-209ENST00000425239 PLEKHD1A6NEE1 506 aa25.15■■□□□ 1.62
ATG4B-209ENST00000425239 EFCAB5A4FU69 1503 aa25.13■■□□□ 1.61
ATG4B-209ENST00000425239 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.12■■□□□ 1.61
ATG4B-209ENST00000425239 PTPRMP28827 1452 aa25.1■■□□□ 1.61
ATG4B-209ENST00000425239 AKNAQ7Z591 1439 aa25.09■■□□□ 1.61
ATG4B-209ENST00000425239 RICTORQ6R327 1708 aa25.08■■□□□ 1.61
ATG4B-209ENST00000425239 BCORL1Q5H9F3 1711 aa25.06■■□□□ 1.6
ATG4B-209ENST00000425239 FANCAO15360 1455 aa25.05■■□□□ 1.6
ATG4B-209ENST00000425239 DENND4BO75064 1496 aaPredicted RBP25.05■■□□□ 1.6
ATG4B-209ENST00000425239 TTC37Q6PGP7 1564 aa25.05■■□□□ 1.6
ATG4B-209ENST00000425239 CDK13Q14004 1512 aaKnown RBP25.03■■□□□ 1.6
ATG4B-209ENST00000425239 ARHGEF40Q8TER5 1519 aa24.99■■□□□ 1.59
ATG4B-209ENST00000425239 MADDQ8WXG6 1647 aa24.99■■□□□ 1.59
ATG4B-209ENST00000425239 ARHGAP35Q9NRY4 1499 aa24.98■■□□□ 1.59
ATG4B-209ENST00000425239 CHIC1Q5VXU3 224 aa24.98■■□□□ 1.59
ATG4B-209ENST00000425239 ZMYM4Q5VZL5 1548 aa24.97■■□□□ 1.59
ATG4B-209ENST00000425239 SIGLEC1Q9BZZ2 1709 aa24.97■■□□□ 1.59
ATG4B-209ENST00000425239 CFAP74Q9C0B2 1584 aa24.97■■□□□ 1.59
ATG4B-209ENST00000425239 PLCH2O75038 1416 aa24.96■■□□□ 1.59
ATG4B-209ENST00000425239 ARID4BQ4LE39 1312 aaPredicted RBP24.96■■□□□ 1.59
ATG4B-209ENST00000425239 YEATS2Q9ULM3 1422 aa24.95■■□□□ 1.58
ATG4B-209ENST00000425239 UBTFP17480 764 aaKnown RBP24.94■■□□□ 1.58
ATG4B-209ENST00000425239 EHMT2Q96KQ7 1210 aa24.92■■□□□ 1.58
ATG4B-209ENST00000425239 FMN1Q68DA7 1419 aa24.92■■□□□ 1.58
ATG4B-209ENST00000425239 MAGI2Q86UL8 1455 aa24.91■■□□□ 1.58
ATG4B-209ENST00000425239 HECW1Q76N89 1606 aa24.9■■□□□ 1.58
ATG4B-209ENST00000425239 LMTK3Q96Q04 1460 aa24.89■■□□□ 1.58
ATG4B-209ENST00000425239 SCAPERQ9BY12 1400 aa24.89■■□□□ 1.58
ATG4B-209ENST00000425239 ZFYVE16Q7Z3T8 1539 aa24.87■■□□□ 1.57
ATG4B-209ENST00000425239 POGZQ7Z3K3 1410 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms