RNA–Protein interactions for RNA: ENST00000425020.6

VPS37A-202, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37A, Length 4,051 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-202ENST00000425020 BAZ1BQ9UIG0 1483 aaKnown RBP14.01□□□□□ -0.17
VPS37A-202ENST00000425020 BAZ1AQ9NRL2 1556 aaPredicted RBP14.01□□□□□ -0.17
VPS37A-202ENST00000425020 NACADO15069 1562 aa14.01□□□□□ -0.17
VPS37A-202ENST00000425020 TMC1Q8TDI8 760 aa13.98□□□□□ -0.17
VPS37A-202ENST00000425020 FOXD1Q16676 465 aa13.96□□□□□ -0.17
VPS37A-202ENST00000425020 EIF4G2P78344 907 aaKnown RBP eCLIP13.95□□□□□ -0.18
VPS37A-202ENST00000425020 CCDC136Q96JN2 1154 aa13.95□□□□□ -0.18
VPS37A-202ENST00000425020 CCNB3Q8WWL7 1395 aa13.94□□□□□ -0.18
VPS37A-202ENST00000425020 RGL3Q3MIN7 710 aa13.94□□□□□ -0.18
VPS37A-202ENST00000425020 KIF27Q86VH2 1401 aa13.94□□□□□ -0.18
VPS37A-202ENST00000425020 VPS8Q8N3P4 1428 aa13.92□□□□□ -0.18
VPS37A-202ENST00000425020 CHGAP10645 457 aaKnown RBP13.92□□□□□ -0.18
VPS37A-202ENST00000425020 ANP32AP39687 249 aaKnown RBP13.91□□□□□ -0.18
VPS37A-202ENST00000425020 CANXP27824 592 aaKnown RBP13.9□□□□□ -0.19
VPS37A-202ENST00000425020 B4GALNT3Q6L9W6 998 aa13.87□□□□□ -0.19
VPS37A-202ENST00000425020 RAPGEF2Q9Y4G8 1499 aa13.87□□□□□ -0.19
VPS37A-202ENST00000425020 CUX2O14529 1486 aa13.85□□□□□ -0.19
VPS37A-202ENST00000425020 RAB3GAP2Q9H2M9 1393 aa13.84□□□□□ -0.19
VPS37A-202ENST00000425020 CARMIL1Q5VZK9 1371 aa13.84□□□□□ -0.19
VPS37A-202ENST00000425020 CHMP7Q8WUX9 453 aaPredicted RBP13.84□□□□□ -0.19
VPS37A-202ENST00000425020 TSPY4P0CV99 314 aa13.84□□□□□ -0.19
VPS37A-202ENST00000425020 TSPY10P0CW01 314 aa13.84□□□□□ -0.19
VPS37A-202ENST00000425020 ARXQ96QS3 562 aa13.8□□□□□ -0.2
VPS37A-202ENST00000425020 ANP32EQ9BTT0 268 aa13.8□□□□□ -0.2
VPS37A-202ENST00000425020 CFDP1Q9UEE9 299 aaPredicted RBP13.78□□□□□ -0.2
VPS37A-202ENST00000425020 TSHZ2Q9NRE2 1034 aa13.77□□□□□ -0.21
VPS37A-202ENST00000425020 SLC24A1O60721 1099 aa13.76□□□□□ -0.21
VPS37A-202ENST00000425020 ZBTB47Q9UFB7 747 aaPredicted RBP13.76□□□□□ -0.21
VPS37A-202ENST00000425020 HSPA5P11021 654 aaKnown RBP13.76□□□□□ -0.21
VPS37A-202ENST00000425020 DHX57Q6P158 1386 aaKnown RBP13.76□□□□□ -0.21
VPS37A-202ENST00000425020 RBM19Q9Y4C8 960 aaKnown RBP13.75□□□□□ -0.21
VPS37A-202ENST00000425020 TDRD9Q8NDG6 1382 aaKnown RBP13.75□□□□□ -0.21
VPS37A-202ENST00000425020 SETD5Q9C0A6 1442 aa13.74□□□□□ -0.21
VPS37A-202ENST00000425020 CARD11Q9BXL7 1154 aa13.74□□□□□ -0.21
VPS37A-202ENST00000425020 PLPPR3Q6T4P5 718 aa13.74□□□□□ -0.21
VPS37A-202ENST00000425020 PPP1R15AO75807 674 aaPredicted RBP13.72□□□□□ -0.21
VPS37A-202ENST00000425020 TOP2AP11388 1531 aaKnown RBP13.7□□□□□ -0.22
VPS37A-202ENST00000425020 CC2D1BQ5T0F9 858 aaKnown RBP13.69□□□□□ -0.22
VPS37A-202ENST00000425020 PLEKHD1A6NEE1 506 aa13.69□□□□□ -0.22
VPS37A-202ENST00000425020 EIF5BO60841 1220 aaKnown RBP13.68□□□□□ -0.22
VPS37A-202ENST00000425020 WDR43Q15061 677 aaKnown RBP eCLIP13.68□□□□□ -0.22
VPS37A-202ENST00000425020 FHOD3Q2V2M9 1422 aa13.68□□□□□ -0.22
VPS37A-202ENST00000425020 NEUROD2Q15784 382 aa13.68□□□□□ -0.22
VPS37A-202ENST00000425020 DCAF11Q8TEB1 546 aa13.67□□□□□ -0.22
VPS37A-202ENST00000425020 LAS1LQ9Y4W2 734 aaKnown RBP13.66□□□□□ -0.22
VPS37A-202ENST00000425020 TNNT2P45379 298 aaPredicted RBP13.65□□□□□ -0.22
VPS37A-202ENST00000425020 L3MBTL2Q969R5 705 aa13.65□□□□□ -0.22
VPS37A-202ENST00000425020 EIF4G1Q04637 1599 aaKnown RBP13.64□□□□□ -0.23
VPS37A-202ENST00000425020 PPP4R2Q9NY27 417 aa13.64□□□□□ -0.23
VPS37A-202ENST00000425020 RTN4Q9NQC3 1192 aaKnown RBP13.63□□□□□ -0.23
VPS37A-202ENST00000425020 FHAD1B1AJZ9 1412 aa13.63□□□□□ -0.23
VPS37A-202ENST00000425020 MPHOSPH9Q99550 1183 aa13.62□□□□□ -0.23
VPS37A-202ENST00000425020 PKD2Q13563 968 aa13.61□□□□□ -0.23
VPS37A-202ENST00000425020 ATAD2BQ9ULI0 1458 aa13.61□□□□□ -0.23
VPS37A-202ENST00000425020 RGS3P49796 1198 aa13.6□□□□□ -0.23
VPS37A-202ENST00000425020 CCER2I3L3R5 266 aa13.59□□□□□ -0.23
VPS37A-202ENST00000425020 ARHGAP35Q9NRY4 1499 aa13.59□□□□□ -0.23
VPS37A-202ENST00000425020 SMARCA4P51532 1647 aa13.59□□□□□ -0.23
VPS37A-202ENST00000425020 STAG3Q9UJ98 1225 aa13.57□□□□□ -0.24
VPS37A-202ENST00000425020 PLEKHG5O94827 1062 aa13.57□□□□□ -0.24
VPS37A-202ENST00000425020 SMARCA2P51531 1590 aa13.56□□□□□ -0.24
VPS37A-202ENST00000425020 NEFMP07197 916 aa13.56□□□□□ -0.24
VPS37A-202ENST00000425020 TIMELESSQ9UNS1 1208 aa13.54□□□□□ -0.24
VPS37A-202ENST00000425020 KNSTRNQ9Y448 316 aa13.54□□□□□ -0.24
VPS37A-202ENST00000425020 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.52□□□□□ -0.25
VPS37A-202ENST00000425020 HSP90AA1P07900 732 aaKnown RBP13.52□□□□□ -0.25
VPS37A-202ENST00000425020 FRAT1Q92837 279 aaPredicted RBP13.52□□□□□ -0.25
VPS37A-202ENST00000425020 PPM1GO15355 546 aaPredicted RBP13.51□□□□□ -0.25
VPS37A-202ENST00000425020 NOP58Q9Y2X3 529 aaKnown RBP13.5□□□□□ -0.25
VPS37A-202ENST00000425020 PHLDB1Q86UU1 1377 aa13.5□□□□□ -0.25
VPS37A-202ENST00000425020 SAFB2Q14151 953 aaKnown RBP eCLIP13.48□□□□□ -0.25
VPS37A-202ENST00000425020 IGF1RP08069 1367 aa13.48□□□□□ -0.25
VPS37A-202ENST00000425020 ZNF644Q9H582 1327 aaPredicted RBP13.48□□□□□ -0.25
VPS37A-202ENST00000425020 NPM1P06748 294 aaKnown RBP eCLIP13.48□□□□□ -0.25
VPS37A-202ENST00000425020 UPF2Q9HAU5 1272 aaKnown RBP13.48□□□□□ -0.25
VPS37A-202ENST00000425020 CADPSQ9ULU8 1353 aa13.47□□□□□ -0.25
VPS37A-202ENST00000425020 KIF21BO75037 1637 aa13.47□□□□□ -0.25
VPS37A-202ENST00000425020 HNRNPMP52272 730 aaKnown RBP eCLIP13.47□□□□□ -0.256e-7■■■■■ 30.1
VPS37A-202ENST00000425020 ARAP1Q96P48 1450 aa13.46□□□□□ -0.26
VPS37A-202ENST00000425020 NUP155O75694 1391 aa13.45□□□□□ -0.26
VPS37A-202ENST00000425020 DEKP35659 375 aaKnown RBP13.44□□□□□ -0.26
VPS37A-202ENST00000425020 ST20-MTHFSA0A0A6YYL1 179 aa13.44□□□□□ -0.26
VPS37A-202ENST00000425020 PRKRIP1Q9H875 184 aaPredicted RBP13.44□□□□□ -0.26
VPS37A-202ENST00000425020 PLIN1O60240 522 aa13.43□□□□□ -0.26
VPS37A-202ENST00000425020 RAD54L2Q9Y4B4 1467 aa13.42□□□□□ -0.26
VPS37A-202ENST00000425020 FMN1Q68DA7 1419 aa13.42□□□□□ -0.26
VPS37A-202ENST00000425020 SYNJ1O43426 1573 aa13.41□□□□□ -0.26
VPS37A-202ENST00000425020 CCDC184Q52MB2 194 aa13.4□□□□□ -0.26
VPS37A-202ENST00000425020 SPRYD3Q8NCJ5 442 aa13.4□□□□□ -0.26
VPS37A-202ENST00000425020 ESF1Q9H501 851 aaKnown RBP13.39□□□□□ -0.27
VPS37A-202ENST00000425020 RCAN3Q9UKA8 241 aa13.39□□□□□ -0.27
VPS37A-202ENST00000425020 U2SURPO15042 1029 aaKnown RBP13.38□□□□□ -0.27
VPS37A-202ENST00000425020 CCDC146Q8IYE0 955 aa13.38□□□□□ -0.27
VPS37A-202ENST00000425020 TMF1P82094 1093 aa13.37□□□□□ -0.27
VPS37A-202ENST00000425020 NUTM2DQ5VT03 806 aaPredicted RBP13.36□□□□□ -0.27
VPS37A-202ENST00000425020 TPRNQ4KMQ1 711 aa13.36□□□□□ -0.27
VPS37A-202ENST00000425020 WASHC2AQ641Q2 1341 aa13.36□□□□□ -0.27
VPS37A-202ENST00000425020 SLC4A3P48751 1232 aa13.35□□□□□ -0.27
VPS37A-202ENST00000425020 NUDCQ9Y266 331 aa13.35□□□□□ -0.27
VPS37A-202ENST00000425020 ROCK2O75116 1388 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms