RNA–Protein interactions for RNA: ENST00000424833.5

SCN2A-204, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 1 (best)

Gene SCN2A, Length 1,807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-204ENST00000424833 MRC2Q9UBG0 1479 aa12.65□□□□□ -0.39
SCN2A-204ENST00000424833 CCER1Q8TC90 406 aaPredicted RBP12.64□□□□□ -0.39
SCN2A-204ENST00000424833 PCF11O94913 1555 aaKnown RBP12.62□□□□□ -0.39
SCN2A-204ENST00000424833 TIAM1Q13009 1591 aa12.62□□□□□ -0.39
SCN2A-204ENST00000424833 EFCAB5A4FU69 1503 aa12.6□□□□□ -0.39
SCN2A-204ENST00000424833 MAP3K1Q13233 1512 aa12.6□□□□□ -0.39
SCN2A-204ENST00000424833 PBRM1Q86U86 1689 aa12.6□□□□□ -0.39
SCN2A-204ENST00000424833 WDR62O43379 1518 aa12.59□□□□□ -0.39
SCN2A-204ENST00000424833 RRBP1Q9P2E9 1410 aaKnown RBP12.59□□□□□ -0.39
SCN2A-204ENST00000424833 CFAP43Q8NDM7 1665 aa12.59□□□□□ -0.39
SCN2A-204ENST00000424833 FHOD3Q2V2M9 1422 aa12.58□□□□□ -0.4
SCN2A-204ENST00000424833 HNRNPUL2Q1KMD3 747 aaKnown RBP12.58□□□□□ -0.4
SCN2A-204ENST00000424833 SAMD9Q5K651 1589 aa12.57□□□□□ -0.4
SCN2A-204ENST00000424833 FHAD1B1AJZ9 1412 aa12.56□□□□□ -0.4
SCN2A-204ENST00000424833 ADAMTS12P58397 1594 aa12.56□□□□□ -0.4
SCN2A-204ENST00000424833 AQRO60306 1485 aaKnown RBP eCLIP12.56□□□□□ -0.4
SCN2A-204ENST00000424833 PELP1Q8IZL8 1130 aaKnown RBP12.55□□□□□ -0.4
SCN2A-204ENST00000424833 LRRC9Q6ZRR7 1453 aa12.54□□□□□ -0.4
SCN2A-204ENST00000424833 P3H3Q8IVL6 736 aa12.54□□□□□ -0.4
SCN2A-204ENST00000424833 FYCO1Q9BQS8 1478 aa12.54□□□□□ -0.4
SCN2A-204ENST00000424833 ZNF608Q9ULD9 1512 aaPredicted RBP12.53□□□□□ -0.4
SCN2A-204ENST00000424833 SNAPC4Q5SXM2 1469 aa12.53□□□□□ -0.4
SCN2A-204ENST00000424833 THOC2Q8NI27 1593 aaKnown RBP12.52□□□□□ -0.4
SCN2A-204ENST00000424833 CASKIN1Q8WXD9 1431 aa12.52□□□□□ -0.41
SCN2A-204ENST00000424833 IFT140Q96RY7 1462 aa12.52□□□□□ -0.41
SCN2A-204ENST00000424833 CCNB3Q8WWL7 1395 aa12.5□□□□□ -0.41
SCN2A-204ENST00000424833 LRRIQ1Q96JM4 1722 aa12.5□□□□□ -0.41
SCN2A-204ENST00000424833 GRIN2BQ13224 1484 aa12.49□□□□□ -0.41
SCN2A-204ENST00000424833 PHLDB1Q86UU1 1377 aa12.48□□□□□ -0.41
SCN2A-204ENST00000424833 EIF4G3O43432 1585 aaKnown RBP12.47□□□□□ -0.41
SCN2A-204ENST00000424833 FMN1Q68DA7 1419 aa12.47□□□□□ -0.41
SCN2A-204ENST00000424833 IQGAP2Q13576 1575 aa12.45□□□□□ -0.42
SCN2A-204ENST00000424833 ERCC6Q03468 1493 aa12.45□□□□□ -0.42
SCN2A-204ENST00000424833 DHX57Q6P158 1386 aaKnown RBP12.42□□□□□ -0.42
SCN2A-204ENST00000424833 UGGT2Q9NYU1 1516 aa12.4□□□□□ -0.42
SCN2A-204ENST00000424833 ATP1B4Q9UN42 357 aaPredicted RBP12.39□□□□□ -0.43
SCN2A-204ENST00000424833 GRIN2AQ12879 1464 aa12.38□□□□□ -0.43
SCN2A-204ENST00000424833 DAXXQ9UER7 740 aaPredicted RBP12.38□□□□□ -0.43
SCN2A-204ENST00000424833 MAGI3Q5TCQ9 1506 aa12.38□□□□□ -0.43
SCN2A-204ENST00000424833 KIAA0586Q9BVV6 1533 aa12.36□□□□□ -0.43
SCN2A-204ENST00000424833 DISP1Q96F81 1524 aa12.35□□□□□ -0.43
SCN2A-204ENST00000424833 MAGI1Q96QZ7 1491 aaPredicted RBP12.35□□□□□ -0.43
SCN2A-204ENST00000424833 FOXD1Q16676 465 aa12.34□□□□□ -0.43
SCN2A-204ENST00000424833 KIAA0556O60303 1618 aa12.34□□□□□ -0.43
SCN2A-204ENST00000424833 ARHGEF11O15085 1522 aa12.34□□□□□ -0.43
SCN2A-204ENST00000424833 HECW1Q76N89 1606 aa12.34□□□□□ -0.43
SCN2A-204ENST00000424833 ITGAEP38570 1179 aa12.34□□□□□ -0.43
SCN2A-204ENST00000424833 EHBP1L1Q8N3D4 1523 aa12.34□□□□□ -0.43
SCN2A-204ENST00000424833 CEP170Q5SW79 1584 aa12.33□□□□□ -0.43
SCN2A-204ENST00000424833 RAB3GAP2Q9H2M9 1393 aa12.33□□□□□ -0.43
SCN2A-204ENST00000424833 FGD6Q6ZV73 1430 aa12.33□□□□□ -0.44
SCN2A-204ENST00000424833 NCOA2Q15596 1464 aa12.33□□□□□ -0.44
SCN2A-204ENST00000424833 CLSPNQ9HAW4 1339 aa12.33□□□□□ -0.44
SCN2A-204ENST00000424833 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.33□□□□□ -0.44
SCN2A-204ENST00000424833 CCDC18Q5T9S5 1454 aa12.33□□□□□ -0.44
SCN2A-204ENST00000424833 MTUS2Q5JR59 1369 aa12.32□□□□□ -0.44
SCN2A-204ENST00000424833 SYNJ2O15056 1496 aa12.32□□□□□ -0.44
SCN2A-204ENST00000424833 MAPKBP1O60336 1514 aa12.31□□□□□ -0.44
SCN2A-204ENST00000424833 EPRSP07814 1512 aaKnown RBP12.31□□□□□ -0.44
SCN2A-204ENST00000424833 SUPT6HQ7KZ85 1726 aaKnown RBP12.31□□□□□ -0.44
SCN2A-204ENST00000424833 MYT1Q01538 1121 aa12.31□□□□□ -0.44
SCN2A-204ENST00000424833 FAM50AQ14320 339 aaKnown RBP12.3□□□□□ -0.44
SCN2A-204ENST00000424833 CDK13Q14004 1512 aaKnown RBP12.3□□□□□ -0.44
SCN2A-204ENST00000424833 SETD5Q9C0A6 1442 aa12.3□□□□□ -0.44
SCN2A-204ENST00000424833 MYOM3Q5VTT5 1437 aa12.29□□□□□ -0.44
SCN2A-204ENST00000424833 NUP160Q12769 1436 aa12.28□□□□□ -0.44
SCN2A-204ENST00000424833 PTPRKQ15262 1439 aa12.28□□□□□ -0.44
SCN2A-204ENST00000424833 NUP153P49790 1475 aaKnown RBP12.26□□□□□ -0.45
SCN2A-204ENST00000424833 ZNF316A6NFI3 1004 aaPredicted RBP12.25□□□□□ -0.45
SCN2A-204ENST00000424833 RAPGEF6Q8TEU7 1601 aa12.25□□□□□ -0.45
SCN2A-204ENST00000424833 PTPN23Q9H3S7 1636 aa12.25□□□□□ -0.45
SCN2A-204ENST00000424833 DIEXFQ68CQ4 756 aaKnown RBP12.23□□□□□ -0.45
SCN2A-204ENST00000424833 TCOF1Q13428 1488 aaKnown RBP12.23□□□□□ -0.45
SCN2A-204ENST00000424833 CHMP7Q8WUX9 453 aaPredicted RBP12.23□□□□□ -0.45
SCN2A-204ENST00000424833 HFM1A2PYH4 1435 aa12.2□□□□□ -0.46
SCN2A-204ENST00000424833 ARID3CA6NKF2 412 aa12.2□□□□□ -0.46
SCN2A-204ENST00000424833 PLB1Q6P1J6 1458 aa12.19□□□□□ -0.46
SCN2A-204ENST00000424833 FBLN2P98095 1184 aa12.18□□□□□ -0.46
SCN2A-204ENST00000424833 NAIPQ13075 1403 aa12.18□□□□□ -0.46
SCN2A-204ENST00000424833 MIA2Q96PC5 1412 aa12.16□□□□□ -0.46
SCN2A-204ENST00000424833 JPH4Q96JJ6 628 aa12.15□□□□□ -0.46
SCN2A-204ENST00000424833 GCC2Q8IWJ2 1684 aa12.15□□□□□ -0.47
SCN2A-204ENST00000424833 CHD1O14646 1710 aa12.15□□□□□ -0.47
SCN2A-204ENST00000424833 ABCA8O94911 1581 aa12.14□□□□□ -0.47
SCN2A-204ENST00000424833 CARMIL2Q6F5E8 1435 aa12.13□□□□□ -0.47
SCN2A-204ENST00000424833 PRG4Q92954 1404 aaPredicted RBP12.13□□□□□ -0.47
SCN2A-204ENST00000424833 KDM6BO15054 1643 aa12.13□□□□□ -0.47
SCN2A-204ENST00000424833 ADCY10Q96PN6 1610 aa12.13□□□□□ -0.47
SCN2A-204ENST00000424833 UACAQ9BZF9 1416 aa12.12□□□□□ -0.47
SCN2A-204ENST00000424833 KIF14Q15058 1648 aa12.12□□□□□ -0.47
SCN2A-204ENST00000424833 TROQ12816 1431 aaPredicted RBP12.11□□□□□ -0.47
SCN2A-204ENST00000424833 AKNAQ7Z591 1439 aa12.11□□□□□ -0.47
SCN2A-204ENST00000424833 SIN3AQ96ST3 1273 aa12.11□□□□□ -0.47
SCN2A-204ENST00000424833 DNMT1P26358 1616 aaKnown RBP12.1□□□□□ -0.47
SCN2A-204ENST00000424833 DENND4BO75064 1496 aaPredicted RBP12.09□□□□□ -0.47
SCN2A-204ENST00000424833 SHROOM2Q13796 1616 aa12.09□□□□□ -0.47
SCN2A-204ENST00000424833 DAPK1P53355 1430 aa12.08□□□□□ -0.48
SCN2A-204ENST00000424833 ZNF644Q9H582 1327 aaPredicted RBP12.07□□□□□ -0.48
SCN2A-204ENST00000424833 ATP10BO94823 1461 aa12.07□□□□□ -0.48
SCN2A-204ENST00000424833 ABCC5O15440 1437 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms